3A7Q,2E26


Conserved Protein Domain Family
Reelin_repeat_6_subrepeat_2

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cd10050: Reelin_repeat_6_subrepeat_2 
Click on image for an interactive view with Cn3D
C-terminal subrepeat of tandem repeat unit 6 of reelin and related proteins
Reelin is an extracellular glycoprotein involved in neuronal development, specifically in the brain cortex. It contains 8 tandemly repeated units, each of which is composed of two highly similar subrepeats and a central EGF domain. This model characterizes the C-terminal subrepeat, which directly contacts the N-terminal subrepeat and the EGF domain in a compact arrangement. Consecutive reelin repeat units are packed together to form an overall rod-like molecular structure. Reelin repeats 5 and 6 are reported to interact with neuronal receptors, the apolipoprotein E receptor 2 (ApoER2) and the very-low-density lipoprotein receptor (VLDLR), triggering a signaling cascade upon binding and subsequent tyrosine phosphorylation of the cytoplasmic disabled-1 (Dab1).
Statistics
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PSSM-Id: 197358
Aligned: 7 rows
Threshold Bit Score: 265.16
Created: 25-Mar-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
 
reelin repeatreelinEGF domain
Conserved site includes 11 residues -Click on image for an interactive view with Cn3D
Feature 1:reelin repeat interface
Evidence:
  • Structure:2E26: The C-terminal subrepeat of the mouse reelin repeat tightly packs against the N-terminal subrepeat of the next reelin repeat unit, contacts at 4 A
    View structure with Cn3D

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1            # #                                                        ## # #            
3A7Q_A        570 LPTQLKDNFNRAPsn---qNWLTVSGGKLStVCGAVASGLALHFSGGCSRLLVTVDLNLTNAEFIQFYFMYGCLi---tP 643  house mouse
2E26_A        570 LPTQLKDNFNRAPsn---qNWLTVSGGKLStVCGAVASGLALHFSGGCSRLLVTVDLNLTNAEFIQFYFMYGCLi---tP 643  house mouse
O93574       2263 LPTQLKDNFNRSPsn---qNWLTVNGGKLStVCGAVASGMALHFSGGCSRMLVTVDLNLTNAEFIQFYFMYGCLi---tP 2336 chicken
CAG08723     2570 LPSQLKDSFSRAPsl---sHWHTLTGAKLStVCGAVASGAALHFSGGCSRQLVTVDLNLTNAEFIQFYFMYGCMi---pP 2643 spotted green...
XP_784287     703 LPQSLRDTFSDQPvsg-qgHWSKVVGARASaSCGPVASGTYLHFTKSCSRQLVTSDFDLTHADYVQFYYRFGCLn---pP 778  purple urchin
XP_002120384 2372 LPTEVKDIFETSHwdeddsMYATVVGGVIDdVCGDLGFETALHFTGGCSRKLTTVPLDTTDADFVQFNFRFSCNtnpgnP 2451 Ciona intesti...
NP_001131084 2518 LPTQLKDTFNRAPss---hNWLTVNGGKLSsVCGAVASGMALHFSGGCSRLLVSVDLNLTNAEFVQFYFMYGCLi---iP 2591 western clawe...
Feature 1                                            # ###                                #  
3A7Q_A        644 SNRNQGVLLEYSVNGGITWNLLMEIFYDQYS-KPGFVNILLPPDAKEIATRFRWWQPRHDglDQNDWAIDNVLIS 717  house mouse
2E26_A        644 SNRNQGVLLEYSVNGGITWNLLMEIFYDQYS-KPGFVNILLPPDAKEIATRFRWWQPRHDglDQNDWAIDNVLIS 717  house mouse
O93574       2337 NNRNQGVLLEYSVNGGITWSPLMEIFYDQFS-KPGFVNILLPYDAKTIGTRFRWWQPKHDglDQNDWAIDNVLIS 2410 chicken
CAG08723     2644 SNRNQGVLLEYSLNGGINWHLLTEIFYDLYT-KPGFVNVLLPPAARQEGVRVRWWQPQHDgvDHSDWALDNVLIA 2717 spotted green puff...
XP_784287     779 QHRDEGVLLEYSLDGGITWTLLLELYHHQNG-REIFVSLALPAEARHNGTRLKWWQPSHSgpDTADWAIDNVFIG 852  purple urchin
XP_002120384 2452 VNRDTGVMIDYSRNGGITWNALFELYNDGNNeESRFVNIMLPRESRGVGVQIRWWQPSFTasGADDWAIDNLFIG 2526 Ciona intestinalis
NP_001131084 2592 HSRNQGVLLEYSVNGGINWFLLMEIFYDQYS-KPGFVNILLPASAKTVGTRFRWWQPKHDglDQNDWAIDNVLIS 2665 western clawed frog

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