Conserved Protein Domain Family
CSF-1

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pfam05337: CSF-1 (this model, PSSM-Id:191258 is obsolete and has been replaced by 398810)
Macrophage colony stimulating factor-1 (CSF-1)
Colony stimulating factor 1 (CSF-1) is a homodimeric polypeptide growth factor whose primary function is to regulate the survival, proliferation, differentiation, and function of cells of the mononuclear phagocytic lineage. This lineage includes mononuclear phagocytic precursors, blood monocytes, tissue macrophages, osteoclasts, and microglia of the brain, all of which possess cell surface receptors for CSF-1. The protein has also been linked with male fertility and mutations in the Csf-1 gene have been found to cause osteopetrosis and failure of tooth eruption. Structurally these are short-chain 4-helical cytokines.
Statistics
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PSSM-Id: 191258
Aligned: 9 rows
Threshold Bit Score: 261.113
Created: 13-Jul-2015
Updated: 5-Aug-2015
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P09603 272 STIGGSPQPRPSVGAFnpGMEDILDSAMGTNWVPEEASGEASeipvpqgtelspSRPGGGSMQTEPARPSNFLSASSPLP 351 human
P09603   1 MTAPGAAGRCPPTTWL--GSLLLLVCLLASRSITEEVSEYCS------------HMIGSGHLQSLQRLIDSQMETSCQIT 66  human
Q3TLQ6   1 MTARGAAGRCPSSTWL--GSRLLLVCLLMSRSIAKEVSEHCS------------HMIGNGHLKVLQQLIDSQMETSCQIA 66  house mouse
O77709   1 MTARGAAGRCPPTTWL--GPLLLLACLLVSNGATEEVSENCS------------HMIGNGHLLFLQQLIDSQMETSCQIS 66  cattle
O77710   1 MTARGAAGRCPPTTWL--GPLLLLACLLVSNGATEEVSENCS------------HMIGNGHLLFLQQLIDSQMETSCQIS 66  cattle
Q64129   1 MTARGRAGPCPSSTWL--GSRLLLVCLLMSRSIAKEVSEHCS------------HMIGNGHLKVLQQLIDSQMETSCQIA 66  Mus sp.
Q6GMN4 265 QPNHEDPQPHPSAGAPipGVEDIIESSMGTNWVLEEASGEASegfltqerkfspSNPVGGSIQAETDRPWA-RSASSPFP 343 Norway rat
O77709 274 TG--DSPQPGPSVGAFvtGMEDVLDSLLGANIALEEGSGEASegpipqggelsfYSLGGRSVQAEPASPSHTPPASSALS 351 cattle
P07141 273 LT--EDSQPHPSAGGPvpGVEDILESSLGTNWVLEEASGEASegfltqeakfspSTPVGGSIQAETDRPRA-LSAS-PFP 348 house mouse
P09603 352 ASAKGQQPAD-----VTGTALPRVGPVRPTGQDWNHTPQKT----------DHPSALLRDPPEPGSPRISSLRPQglsnp 416 human
P09603  67 FEFVDQEQLKdpvcyLKKAFLLVQDIMEDTMRFRDNTPNAIaivqlqelslRLKSCFTKDYEEHDKACVRTFYET----- 141 human
Q3TLQ6  67 FEFVDQEQLDdpvcyLKKAFFLVQDIIDETMRFKDNTPNANaterlqelsnNLNSCFTKDYEEQNKACVRTFHET----- 141 house mouse
O77709  67 FEFVDQEQLDdpvcyLKKAFLLVQDIMEDTMRFKDNTPNAKvivqlqelslRLKSCFTMDYDEQDKACVRTFHET----- 141 cattle
O77710  67 FEFVDQEQLDdpvcyLKKAFLLVQDIMEDTMRFKDNTPNAKvivqlqelslRLKSCFTMDYDEQDKACVRTFHET----- 141 cattle
Q64129  67 FEFVDQEQLDdpvcyLKKAFFLVQDIIDETMRFKDNTPNRNaterlqelsnNLNSCFTKDYEEQNKACVRTFHET----- 141 Mus sp.
Q6GMN4 344 KLTEDQQPTN-----ITDTPLTEVNPMRPTGQTLNNTPEKT----------DGSSTLREDQQEPRSPHFATLNPQrvgns 408 Norway rat
O77709 352 GSGKGLRLVD-----ATSAHLPTLGPMRPT-EAWSHTPEKT----------ERPSASPRDPQEPDMAKTPALHPQglsnp 415 cattle
P07141 349 KSTEDQKPVD-----ITDRPLTEVNPMRPIGQTQNNTPEKT----------DGTSTLREDHQEPGSPHIATPNPQrvsns 413 house mouse
P09603 417 stlsaqpqlsrshssgsvlPLGELEGRR--------------------------STRDRRSPAEPEGGPASEGAARPLPR 470 human
P09603 142 -------------------PLQLLEKVKn-------------------------VFNETKNLLDKDWNIFSKNCNNSFAE 177 human
Q3TLQ6 142 -------------------PLQLLEKIKn-------------------------FFNETKNLLEKDWNIFTKNCNNSFAK 177 house mouse
O77709 142 -------------------PLQLLEKIKn-------------------------VFNETKNLLKKDWNIFSKNCNNSFAK 177 cattle
O77710 142 -------------------PLQLLEKIKn-------------------------VFNETKNLLKKDWNIFSKNCNNSFAK 177 cattle
Q64129 142 -------------------PLQLLEKIKn-------------------------FFNETKNLLEKDWNIFTKNCNNSFAK 177 Mus sp.
Q6GMN4 409 atpyakllppkshswgivlPLGELEGKKstrdrrspaelkggpasegaarpvaqSTRDRRSPAELKGGPASEGAARPVAR 488 Norway rat
O77709 416 salssqpklprshswghvlSLGELEGRR--------------------------STRDRRSLAELKGGQASEGAARPPAR 469 cattle
P07141 414 atpvaqlllpkshswgivlPLGELEGKR--------------------------STRDRRSPAELEGGSASEGAARPVAR 467 house mouse
P09603 471 FNSVP---------LTDTGHERQSEGSFSPQLQesvfhlLVPSvilvLLAVGGLLFyrwrrrshQEPQRADSPLEQPEGS 541 human
P09603 178 CSSQDvvtkpdcncLYPKAIPSSDPASVSPHQP------LAPS----MAPVAGLTW--------EDSEGTEGSSLLPGEQ 239 human
Q3TLQ6 178 CSSRDvvtkpdcncLYPKATPSSDPASASPHQP------PAPS----MAPLAGLAW--------DDSQRTEGSSLLPSEL 239 house mouse
O77709 178 CSSHDvvtkpdcncLYPKATPSSDLASVSPQQS------PTPS----TAPMAGLTW--------ADSEATDGSSLLPREQ 239 cattle
O77710 178 CSSH--------------GHERQHKEASDPQLPgfvfrlLVPSiilvLLAVGGLLFyrrrrrshQEPQMVDSPMEQPEGS 243 cattle
Q64129 178 CSSR--------------GHVEQHEGSSDPQIPesvfhlLVPGiilvLLTVGGLLFykwkwrshRDPQTLDSSVGRPEDS 243 Mus sp.
Q6GMN4 489 FNSIP---------LTDTGSSIQ-----DPQTSafvfwvL--GiilvLLAVGGLLFyswkrrshRDPRTLDSSVGRPEGS 552 Norway rat
O77709 470 FNSVP---------LTDTGHERQHKEASDPQLPgfvfrlLVPSiilvLLAVGGLLFyrrrrrshQEPQMVDSPMEQPEGS 540 cattle
P07141 468 FNSIP---------LTDTGHVEQHEGSSDPQIPesvfhlLVPGiilvLLTVGGLLFykwkwrshRDPQTLDSSVGRPEDS 538 house mouse
P09603 542 PL-TQD-DRQVELPV 554 human
P09603 240 PLhTVDpGSAKQRPP 254 human
Q3TLQ6 240 PLrIEDpGSAKQRPP 254 house mouse
O77709 240 ALrTVDpGSAKQRPP 254 cattle
O77710 244 LL-TQEeDRQEELPV 257 cattle
Q64129 244 SL-TQDeDRQVELPV 257 Mus sp.
Q6GMN4 553 SL-AQDeDRQVELPV 566 Norway rat
O77709 541 LL-TQEeDRQEELPV 554 cattle
P07141 539 SL-TQDeDRQVELPV 552 house mouse
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