Conserved Protein Domain Family
SAM_SGMS1-like
?
cd09515: SAM_SGMS1-like 
SAM domain of sphingomyelin synthase related subfamily
SAM (sterile alpha motif) domain of SGMS-like (sphingomyelin synthase) subfamily is a potential protein-protein interaction domain. This group of proteins is related to sphingomyelin synthase 1, and contains an N-terminal SAM domain. The function of SGMS1-like proteins is unknown; they may play a role in sphingolipid metabolism.
Links
?
Statistics
?
PSSM-Id: 188914
Aligned: 17 rows
Threshold Bit Score: 91.9274
Created: 8-Mar-2010
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
Q20696        11 PNEWRCEDVGNWLKKIGMA--KYADLIAmKHKVDGKCLLALTDTDLKDPp--VSINC-LGDIKKILFAIEFLSQK 80  nematode
XP_001897033  43 PEKWNYDDVAAWLNEQGFE--KYANIIAyRHKIDGRTLLMLTEVDLREKp--LKLDC-LGDIKRIALAVSRLRTD 112 agent of lymphatic f...
XP_783607      3 VESWTCKDVAKWLSTKGFG--QYARQLCtNHTIDGQALLLLTEADLRSPp--VSMKV-LGDIKRLIRQIDLLKHQ 72  purple urchin
XP_002127040   3 IHEWGCEEVKVWLKSEGFE--KYSELLCeKHEVDGDVLLSLTEKDLRNPp--LQFKK-LSDIKKLWRCLKLLQQK 72  Ciona intestinalis
XP_002613712   6 VTEWSTDDVRRWMVDKGFQ--EYTELLCdRHRLNGVALLSLTEEDLREPp--ISMHV-LGDLKRLVDAITQLRHD 75  Florida lancelet
XP_002155124  11 VHTWTISDVGEWLCKNGFS--QYKELFCdKHKIDGLALITLTIEDLRQPp--VQIPV-LGDIKRILAKIKTLRSE 80  green hydra
XP_396152      6 IIEWTQKDVAKWLSESGHE--KFVDLFF-DQEIDGKVLLTLKEDDLKLIs--MNIKK-IGDIKRLYISIKQLQRA 74  honey bee
NP_648114     55 VAQWSIENVTSWATCMEHFsrTLLDCLR-QEAIDGEVLLSLTEEDVRDMrykLGYKLtFGELKKFWIAVLKLQLL 128 fruit fly
XP_556552     19 VLGWSCENVSDWARKEGLSr-CIIDWIA-REDIDGRCLLAITEQDVHDLpqhCASPLrFGDIKRFWFATRLLQRQ 91  Anopheles gambiae st...
XP_002737550   5 VSEWTTEQTGHWLEANGFS--SYVELLCdTHKVDGEVLLSLMEDDLRKPp--IELKI-LGDIKKLIHCIRRLQRE 74  Saccoglossus kowalev...
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap