Conserved Protein Domain Family
LIM1_Prickle_1

?
cd09483: LIM1_Prickle_1 
The first LIM domain of Prickle 1
The first LIM domain of Prickle 1. Prickle contains three C-terminal LIM domains and a N-terminal PET domain Prickles have been implicated in roles of regulating tissue polarity or planar cell polarity (PCP). PCP establishment requires the conserved Frizzled/Dishevelled PCP pathway. Prickle interacts with Dishevelled, thereby modulating Frizzled/Dishevelled activity and PCP signaling. Four forms of prickles have been identified: prickle 1-4. The best characterized is prickle 1 and prickle 2 which are differentially expressed. While prickle 1 is expressed in fetal heart and hematological malignancies, prickle 2 is found in mainly expressed in fetal brain, adult cartilage, pancreatic islet, and some types of timorous cells. In addition, Prickle 1 regulates cell movements during gastrulation and neuronal migration through interaction with the noncanonical Wnt11/Wnt5 pathway in zebrafish. Mutations in prickle 1 have been linked to progressive myoclonus epilepsy. LIM domains are 50-60 amino acids in size and share two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein complexes.
Statistics
?
PSSM-Id: 188867
Aligned: 4 rows
Threshold Bit Score: 138.515
Created: 10-Aug-2010
Updated: 2-Oct-2020
Structure
?
Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment: The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                      #  #  #  #                 #  #  
XP_416036    122 CEQCGTKINGGevAVFASRAGPGVCWHPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHA 180 chicken
Q90Z06       126 CEKCGEKINGGevAIFVSRAGPGVCWHPSCFVCSTCNELLVDLIYFYQDGKIHCGRHHA 184 African clawed frog
Q71QF9       126 CEQCGLQMNGGevAVFASRAGPGVCWRPSCFVCFTCNELLVDLIYFYQDGKIHCGRHHA 184 Norway rat
XP_001363017 159 CEQCGIKINAGetAVFASRAGPGIWWHPACFVCFTCNELLVDLIYFYQDGKIYCGRHHA 217 gray short-tailed opossum

| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap