Conserved Protein Domain Family
LIM3_TRIP6

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cd09436: LIM3_TRIP6 
The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
The third LIM domain of Thyroid receptor-interacting protein 6 (TRIP6): TRIP6 is a member of the zyxin LIM protein family and contains three LIM zinc-binding domains at the C-terminal. TRIP6 protein localizes to focal adhesion sites and along actin stress fibers. Recruitment of this protein to the plasma membrane occurs in a lysophosphatidic acid (LPA)-dependent manner. TRIP6 recruits a number of molecules involved in actin assembly, cell motility, survival and transcriptional control. The function of TRIP6 in cell motility is regulated by Src-dependent phosphorylation at a Tyr residue. The phosphorylation activates the coupling to the Crk SH2 domain, which is required for the function of TRIP6 in promoting lysophosphatidic acid (LPA)-induced cell migration. TRIP6 can shuttle to the nucleus to serve as a coactivator of AP-1 and NF-kappaB transcriptional factors. Moreover, TRIP6 can form a ternary complex with the NHERF2 PDZ protein and LPA2 receptor to regulate LPA-induced activation of ERK and AKT, rendering cells resistant to chemotherapy. Recent evidence shows that TRIP6 antagonizes Fas-Induced apoptosis by enhancing the antiapoptotic effect of LPA in cells. As in other LIM domains, this domain family is 50-60 amino acids in size and shares two characteristic zinc finger motifs. The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. LIM domains function as adaptors or scaffolds to support the assembly of multimeric protein.
Statistics
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PSSM-Id: 188820
Aligned: 5 rows
Threshold Bit Score: 147.461
Created: 3-Aug-2010
Updated: 2-Oct-2020
Structure
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Aligned Rows:
 
Zn binding site
Feature 1:Zn binding site [ion binding site]
Evidence:
  • Comment:The two zinc fingers contain eight conserved residues, mostly cysteines and histidines, which coordinately bond to two zinc atoms. The Zn binding residues of LIM domain are highly conserved.

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Feature 1        #  #                       #  #  #  #                    #  #     
NP_957492    480 CSVCNEPIMPAPGqeetVRIVALDRDFHVQCYRCEDCGCLLsegdnqgCYPLDGHVLCKNCNTSRI 545 zebrafish
NP_001026738 528 CSVCKEPIMPAPGqeetVRIVALDRDFHVQCYRCEDCGGLLsegdnqgCYPLDGHILCKTCNSARI 593 chicken
AAI44077     536 CSVCKEPIMPAPGqeetVRIVALDRDFHVHCYRCEDCGGLLsegdnqgCYPLDGHILCKTCNSARI 601 human
NP_001090015 552 CSVCKEPIMPAPGqeetVRIVALDRDFHVQCYRCEDCGSLLsegenqgCYPLDGHILCKAAMLFVF 617 African clawed frog
AAI71171     538 CSVCKEPIMPAPGqeetVRIVALDRDFHVQCYRCEDCGSLLsegenqgCYPLDGHILCKACNAARI 603 western clawed frog

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