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Report for CCDS8903.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8903.1 Public Homo sapiens 12 ZC3H10 24 110 108 CCDS HistoryNCBI Gene:84872Re-query CCDS DB by CCDS ID:8903.1Re-query CCDS DB by GeneID:84872See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8903.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000257940.7 ENSP00000257940.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000257940.7Link to Ensembl Protein Viewer:ENSP00000257940.2Re-query CCDS DB by Nucleotide ID:ENST00000257940Re-query CCDS DB by Protein ID:ENSP00000257940
Original member Current member NCBI NM_001303124.2 NP_001290053.1 Accepted alive Link to Nucleotide Sequence:NM_001303124.2Link to Protein Sequence:NP_001290053.1Re-query CCDS DB by Nucleotide ID:NM_001303124Re-query CCDS DB by Protein ID:NP_001290053Link to BLAST:NP_001290053.1
Original member Current member NCBI NM_001303125.2 NP_001290054.1 Accepted alive Link to Nucleotide Sequence:NM_001303125.2Link to Protein Sequence:NP_001290054.1Re-query CCDS DB by Nucleotide ID:NM_001303125Re-query CCDS DB by Protein ID:NP_001290054Link to BLAST:NP_001290054.1
Original member Current member NCBI NM_032786.3 NP_116175.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032786.3Link to Protein Sequence:NP_116175.1Re-query CCDS DB by Nucleotide ID:NM_032786Re-query CCDS DB by Protein ID:NP_116175Link to BLAST:NP_116175.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001290053.1 434 Q96K80 434 100% 0 0
NP_001290054.1 434 Q96K80 434 100% 0 0
NP_116175.1 434 Q96K80 434 100% 0 0

Chromosomal Locations for CCDS 8903.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 56120563 56121867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1305 nt):
ATGCCTGACCGGGACAGCTATGCCAACGGTACCGGGAGCAGCGGTGGAGGCCCTGGAGGTGGTGGCAGCG
AGGAGGCCAGTGGGGCAGGGGTAGGCAGTGGCGGGGCCAGCTCAGATGCCATCTGTAGAGACTTCTTGAG
GAATGTGTGCAAGCGAGGCAAGCGTTGCCGATATCGCCACCCAGACATGAGCGAGGTGTCCAACTTGGGG
GTGAGCAAAAACGAGTTCATCTTCTGCCATGACTTCCAGAACAAGGAGTGTAGCCGCCCAAATTGCCGTT
TCATCCATGGCTCCAAGGAGGATGAGGATGGCTATAAGAAGACAGGAGAGCTTCCCCCACGGCTGAGGCA
GAAAGTAGCAGCTGGCCTTGGCCTTTCACCGGCTGACCTACCAAATGGCAAGGAGGAGGTCCCTATCTGC
CGTGACTTTCTCAAGGGTGACTGTCAGAGAGGAGCCAAGTGCAAGTTCCGTCACCTGCAACGGGATTTTG
AGTTTGATGCTCGGGGTGGAGGAGGCACTGGTGGGGGCTCAACAGGCTCAGTCCTCCCAGGACGACGTCA
TGATCTCTATGATATCTATGACCTTCCTGACAGGGGCTTTGAGGACCATGAGCCAGGCCCAAAACGCCGG
CGAGGTGGATGCTGCCCCCCTGATGGCCCTCATTTTGAGTCATATGAATATAGTTTGGCTCCACCGCGAG
GGGTGGAGTGCAGACTGCTAGAGGAGGAGAATGCCATGCTCAGGAAGCGGGTAGAGGAGTTAAAGAAGCA
GGTCAGCAACCTGCTGGCCACCAATGAGGTACTACTGGAACAAAATGCTCAGTTCCGCAATCAGGCCAAG
GTCATAACCCTGAGCTCCACTGCACCAGCGACTGAGCAGACTCTGGCCCCCACTGTGGGCACTGTTGCCA
CTTTTAACCATGGCATTGCCCAGACTCACACTACTCTCAGCAGCCAGGCTCTACAGCCTCGTCCAGTGTC
CCAGCAAGAACTGGTGGCCCCTGCTGGAGCTCCAGCTGCTCCCCCAACTAATGCTGCACCTCCTGCTGCT
CCACCACCCCCACCCCCACACTTGACCCCAGAGATCACGCCACTGTCAGCTGCCCTGGCTCAAACAATTG
CCCAGGGAATGGCACCTCCACCTGTCTCCATGGCTCCTGTGGCTGTATCTGTGGCTCCTGTGGCCCCTGT
GGCTGTATCGATGGCCCAACCCTTGGCAGGAATCACAATGAGCCACACCACCACTCCCATGGTGACTTAC
CCTATCGCTTCCCAGAGCATGCGCATCACGGCCATGCCACACTGA

Translation (434 aa):
MPDRDSYANGTGSSGGGPGGGGSEEASGAGVGSGGASSDAICRDFLRNVCKRGKRCRYRHPDMSEVSNLG
VSKNEFIFCHDFQNKECSRPNCRFIHGSKEDEDGYKKTGELPPRLRQKVAAGLGLSPADLPNGKEEVPIC
RDFLKGDCQRGAKCKFRHLQRDFEFDARGGGGTGGGSTGSVLPGRRHDLYDIYDLPDRGFEDHEPGPKRR
RGGCCPPDGPHFESYEYSLAPPRGVECRLLEEENAMLRKRVEELKKQVSNLLATNEVLLEQNAQFRNQAK
VITLSSTAPATEQTLAPTVGTVATFNHGIAQTHTTLSSQALQPRPVSQQELVAPAGAPAAPPTNAAPPAA
PPPPPPHLTPEITPLSAALAQTIAQGMAPPPVSMAPVAVSVAPVAPVAVSMAQPLAGITMSHTTTPMVTY
PIASQSMRITAMPH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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