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Report for CCDS26663.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26663.1 Public Mus musculus 13 Cetn3 23 108 98 CCDS HistoryNCBI Gene:12626Re-query CCDS DB by CCDS ID:26663.1Re-query CCDS DB by GeneID:12626See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26663.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022009.9 ENSMUSP00000022009.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022009.9Link to Ensembl Protein Viewer:ENSMUSP00000022009.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000022009Re-query CCDS DB by Protein ID:ENSMUSP00000022009
Original member Current member NCBI NM_007684.4 NP_031710.1 Accepted alive Link to Nucleotide Sequence:NM_007684.4Link to Protein Sequence:NP_031710.1Re-query CCDS DB by Nucleotide ID:NM_007684Re-query CCDS DB by Protein ID:NP_031710Link to BLAST:NP_031710.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031710.1 167 O35648 167 100% 0 0

Chromosomal Locations for CCDS 26663.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 81783341 81783357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 81784641 81784776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 81786843 81786957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 81791956 81792147 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 81796654 81796697 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (504 nt):
ATGAGTTTAGCTCTGAGAGGTGAGCTTGTAGTAGACAAAACAAAAAGGAAAAAACGAAGAGAGCTCTCTG
AAGAACAGAAGCAAGAAATTAAAGATGCTTTTGAGCTGTTTGATACCGACAAAGACCAAGCCATAGATTA
TCATGAATTAAAGGTGGCAATGAGAGCCTTGGGCTTTGATGTGAAAAAGGCTGATGTGTTGAAGATTCTT
AAAGATTATGACAGAGAAGCCACTGGCAAGATCACATTTGAAGATTTTAATGAAGTTGTGACAGACTGGA
TACTAGAGAGAGATCCACATGAGGAGATACTGAAAGCATTTAAACTATTTGACGATGACGATTCAGGAAA
GATAAGCTTGAGGAATTTACGGCGTGTTGCCAGAGAGCTGGGTGAGAACATGAGCGATGAGGAGCTCCGG
GCCATGATAGAGGAGTTTGACAAAGACGGCGATGGAGAGATAAATCAAGAGGAATTCATTGCTATTATGA
CTGGTGACATATAA

Translation (167 aa):
MSLALRGELVVDKTKRKKRRELSEEQKQEIKDAFELFDTDKDQAIDYHELKVAMRALGFDVKKADVLKIL
KDYDREATGKITFEDFNEVVTDWILERDPHEEILKAFKLFDDDDSGKISLRNLRRVARELGENMSDEELR
AMIEEFDKDGDGEINQEEFIAIMTGDI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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