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Report for CCDS23615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23615.1 Public Mus musculus 9 Acvr2b 23 108 98 CCDS HistoryNCBI Gene:11481Re-query CCDS DB by CCDS ID:23615.1Re-query CCDS DB by GeneID:11481See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 23615.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000165044.2 ENSMUSP00000126108.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000165044.2Link to Ensembl Protein Viewer:ENSMUSP00000126108.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000165044Re-query CCDS DB by Protein ID:ENSMUSP00000126108
Original member Current member NCBI NM_007397.3 NP_031423.1 Accepted alive Link to Nucleotide Sequence:NM_007397.3Link to Protein Sequence:NP_031423.1Re-query CCDS DB by Nucleotide ID:NM_007397Re-query CCDS DB by Protein ID:NP_031423Link to BLAST:NP_031423.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031423.1 536 P27040-1 536 100% 0 0

Chromosomal Locations for CCDS 23615.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 119402546 119402597 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119427455 119427662 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119427967 119428076 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119428201 119428568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119429865 119430008 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119430220 119430368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119431224 119431338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119432489 119432627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119432713 119432843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 119433267 119433461 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1611 nt):
ATGACGGCGCCCTGGGCGGCCCTCGCCCTTCTCTGGGGATCGCTGTGCGCCGGTTCCGGGCGAGGGGAGG
CTGAGACTCGGGAGTGCATCTACTACAACGCCAACTGGGAGCTGGAGCGCACCAACCAGAGCGGCCTGGA
GCGCTGCGAGGGGGAACAGGACAAGCGGCTGCACTGCTACGCCTCGTGGCGCAACAGCTCGGGCACCATC
GAGCTGGTGAAGAAGGGCTGCTGGCTAGATGACTTCAATTGCTACGACAGGCAGGAGTGTGTGGCCACCG
AGGAGAACCCCCAGGTGTACTTCTGCTGCTGCGAAGGCAACTTCTGCAACGAGCGCTTCACCCACTTGCC
GGAGCCTGGGGGCCCAGAAGTCACGTACGAGCCACCCCCGACAGCCCCCACCCTGCTCACGGTGCTGGCC
TACTCGCTGCTGCCCATTGGAGGCCTCTCTCTCATCGTCCTGCTGGCCTTCTGGATGTATCGTCATCGGA
AGCCTCCCTACGGCCATGTGGACATCCATGAGGTGAGACAGTGCCAGCGTTGGGCAGGGAGAAGGGACGG
CTGTGCGGACTCCTTTAAGCCCTTGCCTTTCCAGGACCCGGGGCCTCCGCCCCCATCCCCTCTGGTGGGC
CTGAAGCCACTACAGCTGCTGGAGATCAAGGCTCGGGGCCGCTTTGGCTGCGTTTGGAAAGCTCAGCTCA
TGAACGACTTTGTGGCTGTGAAGATCTTCCCACTTCAGGACAAGCAGTCGTGGCAGAGTGAACGGGAAAT
CTTCAGCACACCCGGCATGAAGCACGAAAACTTGTTGCAGTTCATTGCTGCCGAGAAACGAGGCTCCAAC
CTGGAGGTGGAGCTGTGGCTCATCACAGCCTTCCACGACAAGGGCTCCCTCACGGATTACCTCAAGGGGA
ACATCATCACGTGGAACGAACTGTGCCACGTGGCGGAGACGATGTCACGAGGCCTCTCATACCTGCATGA
GGATGTGCCGTGGTGTCGTGGTGAGGGCCACAAGCCTTCTATTGCCCACAGGGACTTCAAAAGCAAGAAT
GTACTGCTGAAGAGCGACCTCACCGCGGTGCTGGCTGACTTCGGCCTGGCTGTTCGGTTTGAGCCAGGGA
AGCCTCCTGGGGATACCCATGGACAGGTTGGCACCAGACGGTACATGGCCCCTGAGGTGCTGGAAGGAGC
CATCAACTTCCAGAGAGACGCCTTCCTGCGTATCGACATGTACGCCATGGGCCTGGTGCTGTGGGAGCTC
GTCTCTCGGTGCAAGGCTGCAGACGGGCCTGTCGATGAGTACATGCTGCCCTTCGAGGAGGAGATTGGCC
AGCACCCTTCGCTGGAGGAGCTTCAGGAGGTGGTTGTCCACAAGAAGATGAGGCCCACGATTAAGGATCA
CTGGCTGAAACACCCGGGCCTGGCCCAGCTCTGCGTGACCATCGAGGAGTGCTGGGACCATGATGCAGAG
GCTCGCCTTTCTGCAGGCTGTGTAGAAGAGCGGGTATCCCTGATCAGGAGGTCGGTCAACGGCACTACCT
CGGACTGTCTCGTCTCTCTGGTGACCTCCGTCACCAATGTGGACCTGCTCCCTAAAGAGTCCAGCATCTA
A

Translation (536 aa):
MTAPWAALALLWGSLCAGSGRGEAETRECIYYNANWELERTNQSGLERCEGEQDKRLHCYASWRNSSGTI
ELVKKGCWLDDFNCYDRQECVATEENPQVYFCCCEGNFCNERFTHLPEPGGPEVTYEPPPTAPTLLTVLA
YSLLPIGGLSLIVLLAFWMYRHRKPPYGHVDIHEVRQCQRWAGRRDGCADSFKPLPFQDPGPPPPSPLVG
LKPLQLLEIKARGRFGCVWKAQLMNDFVAVKIFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRGSN
LEVELWLITAFHDKGSLTDYLKGNIITWNELCHVAETMSRGLSYLHEDVPWCRGEGHKPSIAHRDFKSKN
VLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRYMAPEVLEGAINFQRDAFLRIDMYAMGLVLWEL
VSRCKAADGPVDEYMLPFEEEIGQHPSLEELQEVVVHKKMRPTIKDHWLKHPGLAQLCVTIEECWDHDAE
ARLSAGCVEERVSLIRRSVNGTTSDCLVSLVTSVTNVDLLPKESSI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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