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Report for CCDS5955.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5955.1 Public Homo sapiens 8 ERICH1 24 110 108 CCDS HistoryNCBI Gene:157697Re-query CCDS DB by CCDS ID:5955.1Re-query CCDS DB by GeneID:157697See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 5955.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262109.8 ENSP00000262109.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000262109.8Link to Ensembl Protein Viewer:ENSP00000262109.7Re-query CCDS DB by Nucleotide ID:ENST00000262109Re-query CCDS DB by Protein ID:ENSP00000262109
Original member Current member NCBI NM_207332.3 NP_997215.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_207332.3Link to Protein Sequence:NP_997215.1Re-query CCDS DB by Nucleotide ID:NM_207332Re-query CCDS DB by Protein ID:NP_997215Link to BLAST:NP_997215.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_997215.1 443 Q86X53 443 100% 0 0

Chromosomal Locations for CCDS 5955.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 664603 664676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 668598 668792 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 673289 674047 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 692478 692612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 715861 716007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 731140 731161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1332 nt):
ATGGCGGCGCACAGGAAGCACGTGTTTGTGGAGAAGGTGCTGCAGAGACTTTTTCCTCCTGTTCCAAGTG
GCCAAGGAAAGAGGGAACCCCAGACGCTGGCCGTCCAAAATCCACCAAAGAAAGTGACCTCTGAGAAAGT
GAGCCAGAAACATGCTGAGCCTTTGACAGACACTGGCTCTGAGACCCCGACTGCCCGACGGCTCTACACT
GCCAGCGGGCCTCCTGAGGGCTACGTCCCCTGTTGGCCGGAGCCCAGCAGCTGTGGGAGCCCCGAGAACG
CCTCCAGCGGGGATGACACAGAAGATCAGGATCCTCATGACCAGCCAAAGAGAAGAAGAATTAGGAAGCA
TAAATCAAAGAAAAAATTTAAAAATCCCAATAATGTTCTTATAGAACAAGCAGAATTAGAGAAACAGCAG
AGTCTGTTACAGGAGAAATCTCAGCGACAGCACACAGATGGCACCACAATAAGCAAAAATAAAAAAAGGA
AACTGAAAAAGAAACAGCAAATTAAAAGGAAGAAAGCAGCCGGCTTGGCAGCAAAGGCTGCTGGTGTCAG
TTTCATGTACCAGCCCGAGGACAGCAGCAATGAAGGGGAAGGCGTGGGAGAGGCTTGTGAGGAGGATGGT
GTGGACACCAGCGAGGAAGACCCGACACTGGCCGGGGAGGAAGACGTTAAAGATACCAGGGAGGAAGATG
GTGCGGACGCTAGCGAGGAAGACCTGACACGGGCCAGGCAGGAAGAGGGTGCGGACGCCAGTGAGGAAGA
TCCGACACCGGCCGGGGAGGAAGACGTTAAAGACGCCAGGGAGGAGGACGGTGTGGACACCATTGAGGAA
GACCTGACACGGGCCGGGGAGGAAGACGGTAAAGACACCAGGGAGGAGGACGGTGCGGACGCCAGCGAGG
AAGACCCGACATGGGCTGGGGAGGAAGAGGGTGCAGACTCCGGGGAGGAGGACGGTGCAGACGCCAGCGA
GGAAGATGATACAATTACCAATGAAAAGGCACACAGTATTCTAAATTTTTTGAAGTCAACACAGGAAATG
TATTTTTATGACGGTGTCTCCAGAGATGCAGCTTCAGCTGCCCTCGCAGATGCCGCTGAGGAGCTGCTGG
ACCGCCTTGCGTCACACAGCATGCTGCCCTCAGACGTGTCCATCCTGTACCACATGAAAACGCTGCTGCT
CCTGCAAGATACTGAGAGATTGAAGCATGCTCTGGAAATGTTCCCAGAACATTGCACGATGCCTCCTGAC
CATGCCAGAGTAATCTCAGCTTTCTTTAGTTACTGGATCACACATATCCTTCCTGAGAAGAGCAGTGACT
AA

Translation (443 aa):
MAAHRKHVFVEKVLQRLFPPVPSGQGKREPQTLAVQNPPKKVTSEKVSQKHAEPLTDTGSETPTARRLYT
ASGPPEGYVPCWPEPSSCGSPENASSGDDTEDQDPHDQPKRRRIRKHKSKKKFKNPNNVLIEQAELEKQQ
SLLQEKSQRQHTDGTTISKNKKRKLKKKQQIKRKKAAGLAAKAAGVSFMYQPEDSSNEGEGVGEACEEDG
VDTSEEDPTLAGEEDVKDTREEDGADASEEDLTRARQEEGADASEEDPTPAGEEDVKDAREEDGVDTIEE
DLTRAGEEDGKDTREEDGADASEEDPTWAGEEEGADSGEEDGADASEEDDTITNEKAHSILNFLKSTQEM
YFYDGVSRDAASAALADAAEELLDRLASHSMLPSDVSILYHMKTLLLLQDTERLKHALEMFPEHCTMPPD
HARVISAFFSYWITHILPEKSSD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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