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Report for CCDS35985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35985.1 Public Mus musculus 10 Dot1l 23 108 98 CCDS HistoryNCBI Gene:208266Re-query CCDS DB by CCDS ID:35985.1Re-query CCDS DB by GeneID:208266See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35985.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000105336.8 ENSMUSP00000100973.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000105336.8Link to Ensembl Protein Viewer:ENSMUSP00000100973.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000105336Re-query CCDS DB by Protein ID:ENSMUSP00000100973
Original member Current member NCBI NM_199322.2 NP_955354.1 Accepted alive Link to Nucleotide Sequence:NM_199322.2Link to Protein Sequence:NP_955354.1Re-query CCDS DB by Nucleotide ID:NM_199322Re-query CCDS DB by Protein ID:NP_955354Link to BLAST:NP_955354.1

Chromosomal Locations for CCDS 35985.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 80755444 80755524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80764602 80764645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80766163 80766237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80768605 80768668 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80771138 80771366 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80773104 80773198 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80773706 80773768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80777556 80777611 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80778263 80778342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80780843 80780911 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80781368 80781474 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80782143 80782184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80783184 80783291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80783424 80783655 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80783873 80783986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80784565 80784656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80784742 80784843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80785050 80785187 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80785498 80785623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80785782 80786266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80786354 80786489 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80787004 80787150 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80787834 80787963 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80788515 80789092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80789314 80789519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80790320 80790384 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80790611 80791561 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 80793507 80793514 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4623 nt):
ATGGGCGAGAAGCTGGAGCTGAGGCTCAAGTCGCCTGTGGGCGCCGAGCCCGCCGTCTACCCGTGGCCGC
TGCCGGTCTACGACAAGCACCATGATGCTGCTCATGAGATTATTGAGACTATCCGGTGGGTCTGCGAGGA
AATCCCAGATCTCAAGCTGGCCATGGAGAACTATGTCCTGATCGACTACGACACCAAAAGTTTTGAAAGC
ATGCAGCGGCTGTGTGACAAATACAACCGGGCCATCGACAGCATCCACCAGCTGTGGAAGGGCACTACAC
AGCCCATGAAGCTGAATACTCGGCCGTCCAATGGACTTCTGCGGCACATCCTGCAGCAGGTATATAACCA
CTCTGTCACTGACCCGGAGAAGCTTAACAACTACGAGCCCTTCTCCCCTGAGGTGTATGGGGAGACCTCC
TTTGACCTGGTGGCCCAGATGATTGATGAGATCAAGATGACAGAGGATGACCTGTTTGTCGACCTGGGCA
GTGGTGTGGGGCAGGTTGTCCTTCAGGTTGCTGCGGCCACCAACTGCAAACATCACTACGGAGTGGAGAA
AGCGGACATCCCAGCCAAGTACGCAGAGACCATGGACCGAGAGTTCAGGAAGTGGATGAAATGGTATGGA
AAAAAGCATGCAGAATACACACTGGAACGAGGTGACTTCCTCTCAGAGGAATGGAGGGAACGGATCGCCA
ACACGAGTGTTATATTTGTGAATAACTTTGCCTTTGGTCCTGAGGTGGATCACCAGCTGAAGGAGCGATT
CGCAAACATGAAGGAAGGCGGCAGAATCGTATCCTCAAAGCCCTTTGCCCCTCTGAACTTCAGGATCAAC
AGCAGGAACTTGAGTGACATTGGCACCATCATGCGTGTGGTGGAGCTGTCGCCCCTGAAGGGCTCTGTGT
CGTGGACTGGCAAGCCTGTCTCCTACTATCTGCACACCATTGACCGCACCATACTTGAAAACTATTTTTC
TAGTCTGAAAAATCCAAAACTCAGGGAGGAGCAGGAGGCAGCTAGGCGAAGACAGCAGCGAGAGAACAAG
AGCAATGCGACCACGCCCACCAAAGTCCCTGAGAGCAAAGCAGCTGCCACTGAGGCCCCCGCGGATTCTG
GTGCTGAGGAAGAAAAATCAGGTGTGGCTACTGTCAAAAAGCCATCTCCCTCCAAAGCCCGGAAGAAGAA
ACTGAACAAGAAAGGGAGAAAGATGGCTGGCCGGAAACGTGGGCGGCCCAAGAAAATGAGTGCTGCCAGT
GCCGAACGCAAGTCTAAGAAGAGCCAAAGCACACTGGATCTCCTGCACTCTCCGCCCCCAGCCCCACCCT
CAGCCTCACCCCAGGATGCGTACAGGGCACCTCACAGCCCATTCTACCAGCTACCTCCAAGCACGCAGCT
GCACTCACCCAACCCACTGCTAGTGGCACCCACCCCACCTGCGCTGCAGAAGCTTTTAGAGTCCTTCAGA
ATCCAGTACCTGCAGTTCCTGGCTTATACAAAGACCCCGCAGTACAAGGCTAACCTACAGCAGCTTCTGG
ACCAGGAGAAGGAGAAGAACACACAGCTCCTGGGCACAGCCCAGCAGCTCTTCGGCCATTGCCAGGCCCA
AAAGGAAGAAATCCGCAGGCTGTTCCAGCAGAAGCTGGATGAGTTGGGCGTGAAGGCGCTGACCTACAAT
GACCTGATTCAGGCCCAGAAGGAAATCTCTGCCCACAACCAGCAGCTGCGGGAACAGTCGGAACAGCTGG
AGAAGGACAACAGCGAGCTTCGGAGCCAGAGCCTGCGGCTGCTCAGGGCCCGGTGTGAGGAGCTGAGGCT
TGACTGGTCCACACTGTCCTTGGAGAACCTGCGGAAAGAGAAGCAGGCCCTGAGGAGCCAGATCTCAGAG
AAGCAGCGGCACTGCCTGGAGCTGCAGATCAGCATCGTGGAGCTCGAGAAGACCCAGCGCCAGCAGGAGC
TCCTGCAGTTAAAGTCCTGTGTACCACCAGATGATGCTTTGTCTTTGCATCTGCGTGGCAAGGGTGCCCT
GGGCCGAGAGCTGGAGGCTGATGCTGGGCGCTTACGCCTTGAGCTGGACTGTGCCAAGATCTCCCTGCCA
CACCTCAGCAGCATGAGCCCTGAGCTGTCCATGAACGGCCATGCTGCCAGCTATGAGCTCTGCAATGCAG
CTAGTCGGCCATCATCCAAGCAGAACACACCCCAGTACCTGGCCTCTCCCTTGGACCAGGAGGTCGTACC
TTGTACCCCTAGCCACAGTGGCCGGCCTCGGCTAGAAAAGCTGTCTGGCCTGGCTTTGCCTGATTACACC
CGGTTGTCACCTGCCAAGATTGTGTTGAGGCGGCACCTGAGCCAGGACCACACTGGGGCTAGCAAAGCAG
CTACCAGTGAGCCACACCCTCGGCCAGAGCACCCCAAGGAGAGCAGCCTTCCCTACCAGAGCCCTGGCTT
GTCCAACAGCATGAAGCTCAGCCCCCAGGATCCACCACTGGCCTCCCCGGCAACCTCGCCCCTCACCTCC
GAGAAAGGTAGTGAGAAGGGTGTGAAGGAGCGTGCCTACAGCAGCCACGGGGAGACCATCACCAGCCTAC
CTGTTAGCATTCCACTCAGCACAGTGCAGCCCAACAAGCTGCCGGTCAGCATCCCACTGGCCAGCGTGGT
GCTGCCCAGCCGTGCTGAGAGGGCGAGGAGCACTCCCAGCCCTGTGCCACAGCCCCGGGACTCTTCAGCC
ACACTTGAGAAGCAGACTGGTGCTTCTGCCCATGGTGCAGGGGGTGCTGGAGCAGGAAGCAGGAGCCTCG
CTGTGGCGCCCACAGGTTTCTATGCTGGTTCGGTGGCCATCAGTGGGGCCCTGGCCAGCAGCCCAGCACC
TCTGGCCTCTGGAATGGAATCTGCTGTTTTTGATGAATCCTCTGGCCCCAGCAGCCTCTTTGCCACCATG
GGGTCTCGCAGCACACCACCACAACACCCACCTCTCCTGTCGCAGTCCCGCAACTCGGGTCCTGCCTCTC
CTGCCCACCAACTCACAGCCAGTCCCCGCCTGAGTGTGACCACTCAGGGCTCGCTGCCAGACACCAGCAA
AGGGGAACTGCCTTCTGATCCTGCCTTCTCAGACCCAGAGAGCGAAGCAAAAAGGAGGATTGTGTTCAGC
ATTTCAGTTGGTGCCAGCTCCAAGCAGTCACCTTCCACCAGGCATAGCCCCTTGACTTCTGGCACCCGAG
GGGACTGTGTGCAGAGCCACGGACAGGACAGTCGTAAGCGCAGCAGAAGGAAGCGTGCATCAGCTGGAAC
ACCTAGCCTCAGCACGGGTGTGTCCCCCAAGCGCCGGGCTCTGCCAACTGTTGCTGGCCTCTTTACACAG
TCCTCGGGGTCTCCTCTTAATCTCAACTCCATGGTCAGCAACATCAACCAGCCACTGGAGATCACAGCCA
TCTCATCCCCTGAGAGCTCCCTGAAGAGCTCCCCCACCCCATACCAGGACCATGACCAGCCTCCGGTGCT
CAGGAAGGAACGGCCTCTAGGACTAACTAATGGGGCCCACTACTCGCCACTGACCTCAGATGAGGAGCCA
GGCTCTGAGGATGAGCCCAGCAGTGCCCGAATTGAGAGAAAAATTGCAACAATCTCTTTAGAAAGCAAAT
CTCCCCCGAAGACACTGGAAAATGGTGGTGGCTTGGTGGGAAGGAAGTCAGCCCCTTCGAGCGAGCCTAT
CAACAGCAGCAAATGGAAGTCTACCTTCTCTCCTATCTCTGACCTCGGCTTGGCCAAGGCTGTGGACAGT
CCGCTACAGGCTGGCTCTGCCCTGAGCCACAGCCCCCTGTTCTCTTTCCGGCCGTCCCTGGAGGAGCCTG
CTGCTGAGGCCAAGCTCCCCACTCACCCAAGGAAAAGCTTTGCGGGCTCTCTGGGTGCAGCCGAGGGGCC
AAGCCCTGGCACCAACCCTCCCAACGGCCTGGCCTTCAGTGGGGGCCTTGCTGCAGACCTCGGTTTACAC
AGCTTCAATGATGGTGCTTCCCTCTCCCACAAGGGCCCGGATGTGACTGGCCTGAGTGCCTCCCTGAGCT
TCCCATCCCAGAGGGGCAAGGACAGTACCACAGAGGCCAACCCTTTCCTCAGCAGGCGGCAGCCCGAGGG
CCTGGGTGGCTTGAAGGGTGAGGGCAACGCAAACAAGGAGTCAGGAGAGAGCCTGCCCCTGTGCGGGCCC
TCGGACAAGGCCTCACTGCCACATGGCAGCAGGGCCAGCAAAGGTCGTGACCGTGAGCTGGACTTCAAGG
GCGGCCACAACCTCTTCATCTCTGCTGCAGCCGTGCCTCCAGGTGGCCTCCTTGGTGGCCCTGGTCTTGT
AACTGTGGCTTCTTCTGCGGGCAGTGCAACACCCACTGCCCAGGCTCCCCGGCCTTTCCTGAGCACCTTT
GCCCCCGGGCCCCAGTTTACTCTGGGCCCCATGTCCCTGCAGGCCAACCTGGGCTCTGTGGCCGGCTCCT
CTGTGCTGCAGTCCTTGTTCAGCACTGTGCCAGCTGCTGCAGGCCTGGTGCATGTGTCGTCCACTGCGAC
CCGATTGACCAACTCACACACCATGGGCAGCTTCTCTTCTGGGGTGGCCGGCGGAACCGTTGGAGGTAAT
TAG

Translation (1540 aa):
MGEKLELRLKSPVGAEPAVYPWPLPVYDKHHDAAHEIIETIRWVCEEIPDLKLAMENYVLIDYDTKSFES
MQRLCDKYNRAIDSIHQLWKGTTQPMKLNTRPSNGLLRHILQQVYNHSVTDPEKLNNYEPFSPEVYGETS
FDLVAQMIDEIKMTEDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYG
KKHAEYTLERGDFLSEEWRERIANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSKPFAPLNFRIN
SRNLSDIGTIMRVVELSPLKGSVSWTGKPVSYYLHTIDRTILENYFSSLKNPKLREEQEAARRRQQRENK
SNATTPTKVPESKAAATEAPADSGAEEEKSGVATVKKPSPSKARKKKLNKKGRKMAGRKRGRPKKMSAAS
AERKSKKSQSTLDLLHSPPPAPPSASPQDAYRAPHSPFYQLPPSTQLHSPNPLLVAPTPPALQKLLESFR
IQYLQFLAYTKTPQYKANLQQLLDQEKEKNTQLLGTAQQLFGHCQAQKEEIRRLFQQKLDELGVKALTYN
DLIQAQKEISAHNQQLREQSEQLEKDNSELRSQSLRLLRARCEELRLDWSTLSLENLRKEKQALRSQISE
KQRHCLELQISIVELEKTQRQQELLQLKSCVPPDDALSLHLRGKGALGRELEADAGRLRLELDCAKISLP
HLSSMSPELSMNGHAASYELCNAASRPSSKQNTPQYLASPLDQEVVPCTPSHSGRPRLEKLSGLALPDYT
RLSPAKIVLRRHLSQDHTGASKAATSEPHPRPEHPKESSLPYQSPGLSNSMKLSPQDPPLASPATSPLTS
EKGSEKGVKERAYSSHGETITSLPVSIPLSTVQPNKLPVSIPLASVVLPSRAERARSTPSPVPQPRDSSA
TLEKQTGASAHGAGGAGAGSRSLAVAPTGFYAGSVAISGALASSPAPLASGMESAVFDESSGPSSLFATM
GSRSTPPQHPPLLSQSRNSGPASPAHQLTASPRLSVTTQGSLPDTSKGELPSDPAFSDPESEAKRRIVFS
ISVGASSKQSPSTRHSPLTSGTRGDCVQSHGQDSRKRSRRKRASAGTPSLSTGVSPKRRALPTVAGLFTQ
SSGSPLNLNSMVSNINQPLEITAISSPESSLKSSPTPYQDHDQPPVLRKERPLGLTNGAHYSPLTSDEEP
GSEDEPSSARIERKIATISLESKSPPKTLENGGGLVGRKSAPSSEPINSSKWKSTFSPISDLGLAKAVDS
PLQAGSALSHSPLFSFRPSLEEPAAEAKLPTHPRKSFAGSLGAAEGPSPGTNPPNGLAFSGGLAADLGLH
SFNDGASLSHKGPDVTGLSASLSFPSQRGKDSTTEANPFLSRRQPEGLGGLKGEGNANKESGESLPLCGP
SDKASLPHGSRASKGRDRELDFKGGHNLFISAAAVPPGGLLGGPGLVTVASSAGSATPTAQAPRPFLSTF
APGPQFTLGPMSLQANLGSVAGSSVLQSLFSTVPAAAGLVHVSSTATRLTNSHTMGSFSSGVAGGTVGGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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