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Report for CCDS37497.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37497.1 Public Mus musculus 17 Igfals 23 108 98 CCDS HistoryNCBI Gene:16005Re-query CCDS DB by CCDS ID:37497.1Re-query CCDS DB by GeneID:16005See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37497.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000050714.7 ENSMUSP00000060169.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000050714.7Link to Ensembl Protein Viewer:ENSMUSP00000060169.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000050714Re-query CCDS DB by Protein ID:ENSMUSP00000060169
Original member Current member NCBI NM_008340.4 NP_032366.2 Accepted alive Link to Nucleotide Sequence:NM_008340.4Link to Protein Sequence:NP_032366.2Re-query CCDS DB by Nucleotide ID:NM_008340Re-query CCDS DB by Protein ID:NP_032366Link to BLAST:NP_032366.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032366.2 603 P70389 603 99.8342% 0 1

Chromosomal Locations for CCDS 37497.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 24878809 24878824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 24879953 24881748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1812 nt):
ATGGCTCTGAGAACAGGAAGCCCAGCCCTGGTGGTGCTTCTGGCTTTCTGGGTGGCACTGGGCCCCTGTT
ACCTGCAGGGGACAGATCCTGGAGCATCAGCAGATGCCGAGGGCCCCCAGTGCCCTGTCACCTGTACCTG
CAGCTATGATGACTACACAGATGAGCTCAGCGTCTTTTGCAGTTCAAGGAACCTCACTCAGCTGCCCGAT
AGCATCCCAGTCAGCACCAGGGCTCTGTGGCTTGACGGAAACAACCTGTCCTCCATCCCCTCAGCGGCCT
TCCAGAACCTGTCCAGCCTAGACTTCCTCAACCTGCAGGGCAGCTGGCTGAGGAGCCTGGAGCCACAGGC
ACTGCTGGGCCTGCAGAATCTCTACCATCTGCACCTGGAACGGAACCTGCTCCGGAGCCTAGCTGCAGGC
TTGTTCAGACACACACCAAGTCTGGCTTCACTCAGTTTGGGCAACAACCTCCTGGGCCGGCTGGAAGAAG
GGCTGTTCCGGGGCCTCAGTCACCTTTGGGACCTCAACCTGGGTTGGAACAGCCTAGTGGTCCTGCCTGA
CACGGTGTTCCAGGGCCTGGGCAACCTCCATGAGCTGGTGCTTGCTGGCAACAAACTGACTTACCTGCAG
CCTGCGCTCTTGTGTGGCTTGGGCGAGCTGCGGGAGCTGGACCTGAGCAGGAACGCTCTCCGCAGCGTCA
AAGCTAATGTCTTTATACATCTGCCCCGGCTGCAGAAGCTCTACCTGGACCGCAACCTCATCACAGCTGT
GGCCCCCCGTGCCTTCCTGGGCATGAAGGCACTGCGTTGGCTGGACCTGTCACACAACCGTGTGGCTGGC
CTCCTGGAGGACACCTTCCCTGGCCTGCTGGGTCTGCATGTCCTGCGCCTGGCACACAACGCCATCACTA
GCTTGCGGCCGCGTACTTTCAAAGATCTACACTTCCTGGAGGAACTGCAGCTCGGCCACAATCGTATCAG
GCAGTTAGGTGAGAAGACGTTTGAGGGCCTGGGGCAGCTGGAGGTACTGACGCTCAATGACAATCAGATC
CATGAGGTCAAGGTGGGCGCCTTCTTTGGCCTCTTCAACGTGGCTGTTATGAATCTCTCCGGCAACTGTC
TGAGGAGCCTCCCCGAGCATGTGTTCCAAGGGCTGGGCAGGCTGCACAGCTTGCACCTGGAGCACAGCTG
CCTGGGCCGCATCCGCCTGCACACTTTCGCCGGCCTCTCAGGGCTGCGCAGGCTCTTCCTCCGGGACAAC
AGCATCTCCAGCATCGAAGAACAGAGCCTGGCAGGGCTCTCAGAGCTCCTGGAACTCGATCTTACCGCCA
ACCAGCTCACGCATCTGCCCCGCCAGCTTTTCCAGGGCCTTGGCCAGCTGGAATATCTGCTTCTGTCCAA
CAACCAACTGACAATGCTCTCTGAGGATGTCCTGGGCCCTCTGCAGCGGGCCTTCTGGCTGGACCTCTCA
CACAACCGCCTCGAGACCCCGGCTGAAGGCCTTTTCTCATCTCTGGGGCGGCTTCGCTACCTCAACCTCA
GGAATAACTCCTTGCAGACTTTTGTGCCGCAGCCTGGCCTGGAGCGCCTGTGGCTCGATGCCAACCCCTG
GGACTGCAGTTGTCCCCTCAAGGCGCTTCGTGACTTTGCCCTACAGAACCCTGGTGTTGTCCCCCGCTTT
GTTCAGACTGTCTGTGAGGGAGATGACTGCCAGCCGGTGTACACTTACAACAACATCACTTGTGCTGGCC
CCGCCAACGTCTCAGGCCTCGACCTTCGAGACATCAGTGAAACACTCTTTGTGCACTGCTGA

Translation (603 aa):
MALRTGSPALVVLLAFWVALGPCYLQGTDPGASADAEGPQCPVTCTCSYDDYTDELSVFCSSRNLTQLPD
SIPVSTRALWLDGNNLSSIPSAAFQNLSSLDFLNLQGSWLRSLEPQALLGLQNLYHLHLERNLLRSLAAG
LFRHTPSLASLSLGNNLLGRLEEGLFRGLSHLWDLNLGWNSLVVLPDTVFQGLGNLHELVLAGNKLTYLQ
PALLCGLGELRELDLSRNALRSVKANVFIHLPRLQKLYLDRNLITAVAPRAFLGMKALRWLDLSHNRVAG
LLEDTFPGLLGLHVLRLAHNAITSLRPRTFKDLHFLEELQLGHNRIRQLGEKTFEGLGQLEVLTLNDNQI
HEVKVGAFFGLFNVAVMNLSGNCLRSLPEHVFQGLGRLHSLHLEHSCLGRIRLHTFAGLSGLRRLFLRDN
SISSIEEQSLAGLSELLELDLTANQLTHLPRQLFQGLGQLEYLLLSNNQLTMLSEDVLGPLQRAFWLDLS
HNRLETPAEGLFSSLGRLRYLNLRNNSLQTFVPQPGLERLWLDANPWDCSCPLKALRDFALQNPGVVPRF
VQTVCEGDDCQPVYTYNNITCAGPANVSGLDLRDISETLFVHC


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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