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Report for CCDS93678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93678.1 Public Homo sapiens 4 SORBS2 24 110 108 CCDS HistoryNCBI Gene:8470Re-query CCDS DB by CCDS ID:93678.1Re-query CCDS DB by GeneID:8470See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93678.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000695410.1 ENSP00000511891.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000695410.1Link to Ensembl Protein Viewer:ENSP00000511891.1Re-query CCDS DB by Nucleotide ID:ENST00000695410Re-query CCDS DB by Protein ID:ENSP00000511891
Original member Current member NCBI NM_001394254.1 NP_001381183.1 Accepted alive Link to Nucleotide Sequence:NM_001394254.1Link to Protein Sequence:NP_001381183.1Re-query CCDS DB by Nucleotide ID:NM_001394254Re-query CCDS DB by Protein ID:NP_001381183Link to BLAST:NP_001381183.1

Chromosomal Locations for CCDS 93678.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 185587627 185587688 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185589679 185589785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185593886 185593935 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185611780 185611980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185614831 185614959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185615045 185615159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185618585 185618631 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185620063 185620151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185622914 185624494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185626832 185627019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185630549 185630598 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185635355 185635411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185638079 185638162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185638877 185639035 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185646668 185646782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185649467 185649656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185651784 185651828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185652662 185652728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185657424 185657596 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 185662104 185662197 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3603 nt):
ATGAGTTACTATCAGAGGCCGTTTTCCCCCTCGGCATATTCTCTCCCAGCCTCACTCAACTCCAGCATTG
TCATGCAGCACGGCACATCCCTCGATTCCACAGACACATATCCCCAGCATGCGCAGTCTCTGGATGGCAC
CACCAGCAGCTCTATCCCCCTGTACCGATCCTCAGAGGAAGAGAAGAGAGTGACAGTCATCAAAGCCCCG
CATTACCCAGGGATCGGGCCCGTGGATGAATCCGGAATCCCCACAGCAATTAGAACGACAGTCGACCGGC
CCAAGGACTGGTACAAGACGATGTTTAAGCAAATTCACATGGTGCACAAGCCGGATGATGACACAGACAT
GTATAATACTCCTTATACATACAATGCAGGTCTGTACAACCCACCCTACAGTGCTCAGTCACACCCTGCT
GCAAAGACCCAAACCTACAGACCTCTTTCCAAAAGCCACTCCGACAACAGCCCCAATGCCTTTAAGGATG
CGTCCTCCCCAGTGCCTCCCCCACATGTTCCACCTCCAGTCCCGCCGCTTCGACCAAGAGATCGGTCTTC
AACAGAAAAGCATGACTGGGATCCTCCAGACAGAAAAGTGGACACAAGAAAATTTCGGTCTGAGCCAAGG
AGTATTTTTGAATATGAACCTGGCAAGTCATCAATTCTTCAGCATGAAAGACCACCCCCTCTCCCAACAA
CTCCGACACCTGTTCCAAGGGAACCTGGCCGGAAGCCTCTTTCTAGCTCCCGACTCGGAGAAGTCACTGG
TAGCCCCTCCCCTCCGCCCCGGAGTGGCGCCCCCACACCAAGCTCGCGCGCCCCGGCTCTGTCTCCCACC
CGGACTGATCGCATAAATCCAGATGACATAGATTTAGAAAATGAGCCCTGGTATAAATTCTTTTCAGAAC
TGGAGTTTGGACGCCCGCCTCCTAAAAAGCCTCTGGACTATGTTCAAGATCATTCTTCTGGTGTTTTCAA
TGAGGCCTCCTTGTATCAGTCCTCTATAGACAGAAGCCTGGAAAGACCCATGAGTTCTGCAAGCATGGCC
AGTGACTTCAGGAAGCGGAGGAAGAGCGAGCCTGCAGTGGGTCCACCACGGGGCTTGGGAGATCAAAGTG
CGAGCAGGACTAGCCCAGGCCGAGTGGACCTCCCAGGATCAAGCACCACTCTTACAAAGTCTTTCACTAG
CTCTTCTCCTTCTTCCCCATCAAGAGCAAAAGGTGGGGATGATAGCAAAATATGTCCATCCCTTTGCAGT
TACTCAGGGCTCAACGGCAACCCCTCCAGTGAGTTAGATTACTGTAGCACTTACAGACAGCACTTGGATG
TCCCTCGGGACTCACCAAGAGCCATTAGTTTCAAGAACGGCTGGCAAATGGCCCGGCAAAACGCAGAAAT
CTGGAGCAGCACGGAAGAAACCGTCTCTCCCAAAATCAAATCCCGGAGCTGTGACGATCTCCTAAACGAC
GACTGCGATAGCTTCCCGGACCCGAAAGTCAAGTCGGAAAGCATGGGCTCCCTGTTATGTGAGGAGGACT
CCAAGGAGAGCTGCCCCATGGCGTGGGGGTCCCCCTACGTCCCGGAGGTTCGCAGTAACGGCAGATCAAG
GATCAGACACAGGTCAGCCCGCAACGCCCCGGGGTTCCTGAAGATGTACAAGAAAATGCACCGCATCAAC
CGCAAGGACCTGATGAACTCCGAGGTGATCTGCTCCGTGAAGTCCAGGATTCTGCAGTACGAGAGCGAGC
AGCAGCACAAGGACCTGCTGCGCGCCTGGAGCCAGTGCTCCACGGAGGAGGTGCCCCGGGACATGGTGCC
CACACGCATCTCCGAATTCGAAAAGCTGATCCAGAAGTCCAAATCCATGCCAAATTTAGGGGATGACATG
CTGTCTCCCGTAACCCTAGAACCACCGCAAAATGGCCTATGTCCCAAGAGGCGGTTTTCCATTGAGTATT
TGCTGGAGGAAGAAAATCAAAGCGGCCCCCCCGCTCGGGGCCGGCGAGGCTGCCAGTCTAACGCCCTGGT
GCCCATTCACATTGAAGTCACCAGCGATGAGCAGCCCCGAGCACACGTGGAGTTTTCCGACAGCGACCAG
GACGGGGTTGTGTCCGACCACAGTGACTACATTCACCTAGAGGGGTCATCCTTCTGCAGTGAAAGTGACT
TTGATCACTTTTCCTTCACATCCTCCGAAAGCTTTTACGGATCCAGCCACCACCACCACCATCACCACCA
CCACCACCACCGCCACCTCATCAGCTCCTGCAAAGGCAGGTGCCCGGCCTCCTACACTCGATTTACCACA
ATGTTAAAACACGAAAGAGCCAGACACGAAAACACCGAGGAGCCCAGAAGGCAAGAAATGGACCCTGGCC
TTTCTAAACTTGCTTTTCTAGTCAGTCCTGTGCCTTTCCGGAGGAAAAAAAATTCGGCTCCTAAGAAACA
GACTGAAAAGGCAAAATGTAAAGCATCTGTGTTTGAGGCTCTGGACTCTGCCCTTAAAGACATCTGTGAC
CAAATTAAAGCTGAAAAGAAAAGGGGGAGCTTGCCGGACAACAGCATCCTGCACCGCCTCATCAGTGAGC
TGCTGCCAGATGTTCCCGAGAGGAACTCATCCCTGAGAGCGCTGAGGAGGAGCCCCCTGCACCAGCCTCT
CCACCCACTGCCTCCCGATGGTGCTATTCATTGTCCACCCTACCAGAATGACTGCGGGAGAATGCCCCGC
AGTGCCTCTTTCCAAGACGTGGACACAGCCAACAGCAGCTGCCACCACCAAGACCGTGGCGGTGCACTCC
AAGACCGTGAGTCCCCTAGAAGTTACTCATCCACTTTGACTGACATGGGGAGAAGTGCACCAAGGGAAAG
AAGAGGAACTCCAGAAAAAGAGAAATTGCCTGCAAAAGCTGTTTATGATTTTAAGGCTCAGACATCTAAG
GAGTTGTCATTTAAGAAAGGAGATACTGTCTACATCCTCAGGAAAATTGATCAAAATTGGTATGAGGGAG
AACACCACGGGAGAGTGGGCATCTTCCCGATCTCATACGTAGAGAAACTCACACCTCCTGAGAAAGCACA
GCCTGCAAGACCACCTCCGCCAGCCCAGCCCGGAGAAATCGGAGAAGCTATAGCCAAATACAACTTCAAC
GCAGACACAAATGTGGAGCTGTCACTGAGAAAGGGAGATAGAGTTATTCTTCTTAAAAGAGTTGATCAAA
ACTGGTATGAAGGTAAAATCCCAGGAACCAACAGACAAGGCATCTTCCCTGTTTCCTATGTGGAGGTCGT
CAAGAAGAACACAAAAGGTGCTGAGGACTACCCTGACCCTCCAATACCCCACAGCTATTCTAGTGATAGG
ATTCACAGCTTGAGCTCAAATAAGCCACAGCGTCCTGTGTTTACTCATGAAAATATTCAAGGTGGGGGGG
AACCGTTTCAGGCTCTGTATAACTATACTCCCAGGAATGAAGATGAGCTGGAGCTCAGAGAAAGTGATGT
CATTGATGTCATGGAAAAGTGTGATGACGGCTGGTTTGTGGGGACCTCAAGAAGAACCAAATTCTTTGGT
ACTTTCCCCGGAAACTACGTCAAGAGGCTGTGA

Translation (1200 aa):
MSYYQRPFSPSAYSLPASLNSSIVMQHGTSLDSTDTYPQHAQSLDGTTSSSIPLYRSSEEEKRVTVIKAP
HYPGIGPVDESGIPTAIRTTVDRPKDWYKTMFKQIHMVHKPDDDTDMYNTPYTYNAGLYNPPYSAQSHPA
AKTQTYRPLSKSHSDNSPNAFKDASSPVPPPHVPPPVPPLRPRDRSSTEKHDWDPPDRKVDTRKFRSEPR
SIFEYEPGKSSILQHERPPPLPTTPTPVPREPGRKPLSSSRLGEVTGSPSPPPRSGAPTPSSRAPALSPT
RTDRINPDDIDLENEPWYKFFSELEFGRPPPKKPLDYVQDHSSGVFNEASLYQSSIDRSLERPMSSASMA
SDFRKRRKSEPAVGPPRGLGDQSASRTSPGRVDLPGSSTTLTKSFTSSSPSSPSRAKGGDDSKICPSLCS
YSGLNGNPSSELDYCSTYRQHLDVPRDSPRAISFKNGWQMARQNAEIWSSTEETVSPKIKSRSCDDLLND
DCDSFPDPKVKSESMGSLLCEEDSKESCPMAWGSPYVPEVRSNGRSRIRHRSARNAPGFLKMYKKMHRIN
RKDLMNSEVICSVKSRILQYESEQQHKDLLRAWSQCSTEEVPRDMVPTRISEFEKLIQKSKSMPNLGDDM
LSPVTLEPPQNGLCPKRRFSIEYLLEEENQSGPPARGRRGCQSNALVPIHIEVTSDEQPRAHVEFSDSDQ
DGVVSDHSDYIHLEGSSFCSESDFDHFSFTSSESFYGSSHHHHHHHHHHHRHLISSCKGRCPASYTRFTT
MLKHERARHENTEEPRRQEMDPGLSKLAFLVSPVPFRRKKNSAPKKQTEKAKCKASVFEALDSALKDICD
QIKAEKKRGSLPDNSILHRLISELLPDVPERNSSLRALRRSPLHQPLHPLPPDGAIHCPPYQNDCGRMPR
SASFQDVDTANSSCHHQDRGGALQDRESPRSYSSTLTDMGRSAPRERRGTPEKEKLPAKAVYDFKAQTSK
ELSFKKGDTVYILRKIDQNWYEGEHHGRVGIFPISYVEKLTPPEKAQPARPPPPAQPGEIGEAIAKYNFN
ADTNVELSLRKGDRVILLKRVDQNWYEGKIPGTNRQGIFPVSYVEVVKKNTKGAEDYPDPPIPHSYSSDR
IHSLSSNKPQRPVFTHENIQGGGEPFQALYNYTPRNEDELELRESDVIDVMEKCDDGWFVGTSRRTKFFG
TFPGNYVKRL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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