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Report for CCDS32965.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32965.1 Public Homo sapiens 19 ARMC6 24 110 108 CCDS HistoryNCBI Gene:93436Re-query CCDS DB by CCDS ID:32965.1Re-query CCDS DB by GeneID:93436See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32965.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269932.10 ENSP00000269932.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000269932.10Link to Ensembl Protein Viewer:ENSP00000269932.6Re-query CCDS DB by Nucleotide ID:ENST00000269932Re-query CCDS DB by Protein ID:ENSP00000269932
Original member Current member EBI ENST00000392335.6 ENSP00000376147.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000392335.6Link to Ensembl Protein Viewer:ENSP00000376147.2Re-query CCDS DB by Nucleotide ID:ENST00000392335Re-query CCDS DB by Protein ID:ENSP00000376147
Original member Current member NCBI NM_033415.4 NP_219483.1 Accepted alive Link to Nucleotide Sequence:NM_033415.4Link to Protein Sequence:NP_219483.1Re-query CCDS DB by Nucleotide ID:NM_033415Re-query CCDS DB by Protein ID:NP_219483Link to BLAST:NP_219483.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_219483.1 476 Q6NXE6-2 476 100% 0 0

Chromosomal Locations for CCDS 32965.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 19042757 19042877 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19043992 19044074 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19051622 19052195 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19054152 19054321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19055265 19055396 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19055791 19055928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 19057416 19057628 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1431 nt):
ATGGTCTCCAAGCGCATTGCCCAGGAGACCTTTGATGCAGCTGTGCGCGAGAACATCGAGGAGTTTGCGA
TGGGGCCAGAGGAGGCAGTGAAAGAGGCCGTGGAGCAGTTTGAATCGCAAGGGGTTGATCTGAGCAACAT
TGTAAAGACGGCACCTAAAGTCTCTGCAGACGGATCCCAGGAGCCCACACATGACATCCTGCAGATGCTC
AGTGACCTCCAGGAGTCTGTGGCCAGCTCTCGCCCCCAGGAGGTGTCAGCATACCTCACCCGCTTCTGCG
ACCAGTGCAAACAGGACAAGGCCTGCCGCTTCCTCGCGGCCCAGAAGGGGGCCTACCCCATCATCTTCAC
TGCCTGGAAGCTGGCCACTGCAGGTGACCAGGGCCTTCTGCTCCAGTCCCTCAATGCCCTGTCGGTGCTG
ACTGATGGACAGCCAGACCTCCTGGATGCCCAGGGCCTGCAGCTCCTAGTGGCCACGCTGACCCAGAATG
CTGATGAGGCTGACCTGACCTGCTCTGGGATCCGCTGTGTGCGTCACGCTTGCCTGAAACATGAACAGAA
TCGGCAAGACCTGGTGAAAGCTGGCGTGCTGCCTCTGCTGACTGGTGCCATCACCCATCATGGCCACCAC
ACTGACGTGGTCAGGGAAGCCTGCTGGGCCCTGCGTGTCATGACCTTCGATGACGACATCCGTGTGCCCT
TTGGCCATGCCCACAACCATGCCAAGATGATTGTGCAGGAGAACAAAGGCTTGAAGGTGCTCATCGAAGC
CACCAAAGCGTTCCTGGATAACCCTGGCATCCTGAGCGAGCTCTGTGGAACCCTGTCCCGCCTGGCCATT
CGCAACGAGTTCTGCCAGGAGGTCGTCGACCTCGGGGGCCTGAGCATTCTGGTGTCCCTGCTAGCCGACT
GCAATGACCACCAGATGAGGGACCAGAGCGGCGTTCAGGAGCTCGTGAAGCAAGTGCTGAGCACCCTGCG
AGCCATCGCAGGCAACGACGACGTGAAAGATGCTATTGTCCGTGCTGGTGGGACGGAGTCCATCGTGGCT
GCTATGACCCAGCATCTGACCAGCCCCCAGGTGTGTGAGCAGAGCTGCGCGGCCCTGTGCTTCCTGGCCC
TGCGTAAGCCCGACAACAGCCGCATCATCGTGGAGGGTGGCGGGGCTGTGGCAGCACTGCAGGCCATGAA
GGCACACCCGCAGAAGGCCGGCGTGCAGAAACAGGCTTGCATGCTGATCCGAAACCTGGTGGCCCACGGC
CAGGCCTTCTCGAAGCCCATCCTGGACCTGGGGGCTGAGGCACTCATCATGCAGGCCCGATCTGCCCACC
GTGACTGTGAGGACGTGGCCAAGGCCGCCCTGCGGGACCTGGGTTGTCATGTCGAGCTCCGAGAGCTGTG
GACAGGCCAGAGGGGCAACCTGGCGCCATGA

Translation (476 aa):
MVSKRIAQETFDAAVRENIEEFAMGPEEAVKEAVEQFESQGVDLSNIVKTAPKVSADGSQEPTHDILQML
SDLQESVASSRPQEVSAYLTRFCDQCKQDKACRFLAAQKGAYPIIFTAWKLATAGDQGLLLQSLNALSVL
TDGQPDLLDAQGLQLLVATLTQNADEADLTCSGIRCVRHACLKHEQNRQDLVKAGVLPLLTGAITHHGHH
TDVVREACWALRVMTFDDDIRVPFGHAHNHAKMIVQENKGLKVLIEATKAFLDNPGILSELCGTLSRLAI
RNEFCQEVVDLGGLSILVSLLADCNDHQMRDQSGVQELVKQVLSTLRAIAGNDDVKDAIVRAGGTESIVA
AMTQHLTSPQVCEQSCAALCFLALRKPDNSRIIVEGGGAVAALQAMKAHPQKAGVQKQACMLIRNLVAHG
QAFSKPILDLGAEALIMQARSAHRDCEDVAKAALRDLGCHVELRELWTGQRGNLAP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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