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Report for CCDS37220.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37220.1 Public Mus musculus 15 Krt2 23 108 98 CCDS HistoryNCBI Gene:16681Re-query CCDS DB by CCDS ID:37220.1Re-query CCDS DB by GeneID:16681See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37220.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000023712.7 ENSMUSP00000023712.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000023712.7Link to Ensembl Protein Viewer:ENSMUSP00000023712.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000023712Re-query CCDS DB by Protein ID:ENSMUSP00000023712
Original member Current member NCBI NM_010668.2 NP_034798.2 Accepted alive Link to Nucleotide Sequence:NM_010668.2Link to Protein Sequence:NP_034798.2Re-query CCDS DB by Nucleotide ID:NM_010668Re-query CCDS DB by Protein ID:NP_034798Link to BLAST:NP_034798.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_034798.2 707 Q3TTY5 707 100% 0 0

Chromosomal Locations for CCDS 37220.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 101811110 101811666 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101811754 101811788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101813073 101813293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101813938 101814063 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101814377 101814541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101815019 101815114 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101815904 101815964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101816311 101816525 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 101817454 101818101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2124 nt):
ATGAGTTGCCAGATCTCCTGCAGGTCCCGAAGAGGAGGAGGCGGCGGCGGAGGCGGCGGATTCAGGGGCT
TCAGTAGCGGTTCAGCTGTGGTCTCTGGAGGGAGCCGGAGATCAAATACCAGCTTCTCCTGCATAAGCCG
CCACGGTGGTGGCAGAGGAGGCTCTGGTGGAGGTGGCTTTGGTAGTCAGAGTCTTGTTGGCCTCGGCGGG
TACAAGAGCATCTCTAGTAGCGTGGCTGGCAACAGTGGTGGCTACGGTGGCAGCAGCTTTGGAGGCAGCA
GTGGCTTTGGAGGAGGCCGAGGATTTGGAGGTGGCCAAGGATTTGGAGGCAGCGGTGGCTTCGGAGGTGG
CTCTGGCTTTGGAGGAGGCCAAGGATTTGGAGGTGGCAGCCGCTTTGGAGGTGGCAGCGGCTTCGGAGGT
GGTGGATTTGGCGGAGGCAGTTTTGGCGGAGGCCGATTTGGAGGTGGCCCTGGAGGTTTTGGGGGCCCTG
GAGGATTCCCTGGTGGAGGTATCCATGAAGTGTCTGTCAATCAGAGCCTCTTGCAGCCTCTTGATGTTAA
AGTAGACCCAGAGATTCAGAACGTGAAGTCTCAGGAGCGGGAGCAGATCAAAACCCTCAACAACAAATTT
GCCTCTTTCATTGACAAGGTGCGATTCCTGGAGCAGCAGAACCAGGTGTTGCGGACCAAATGGGAACTCC
TGCAGCAGTTGGATGTAGGCAGCCGCACCACAAACCTGGACCCCATCTTCCAGGCCTACATAGGCATGCT
CAAGAAGCAAGTGGACAGGCTTTCTGCAGAAAGGACCTCACAGGAGTCAGAGCTGAACAACATGCAGGAT
CTCGTGGAAGACTTTAAGAAGAAGTACGAGGATGAGATCAACAAGCGCACGTCTGCGGAGAATGATTTTG
TGACCATTAAAAAGGATGTGGACAGTTGCTACATGGACAAGACAGAGCTGCAGGCCAGGCTGGACATACT
AGCACAGGAAGTCAACTTCCTGAGAACACTCTACGATGCGGAACTGTCCCAGCTACAGCAGGATGTCACC
GACACCAATGTCATCCTGTCCATGGACAACAACCGGAACCTTGACCTGGACAGCATCATTGCTGAGGTTC
AGAATCAATACGAGATGATCGCCCATAAGAGCAAGGCTGAGTCAGAGGAGCTGTACCACAGCAAGTATGA
AGAACTCCAGGTCACTGCTGTGAAACACGGGGACAGCTTGAAAGAGATCAAGATGGAAATCAGCGAGTTG
AACCGCACAATCCAGAGGCTGCAAGGGGAGATATCACATGTGAAGAAGCAGTGTAAGGGTGTACAAGACT
CCATTGCAGATGCAGAGCAGCGTGGAGAGCATGCCATCAAAGATGCCAGGGGCAAGCTCACTGACCTGGA
GGAGGCCCTACAACAGTGCCGAGAGGACCTGGCCCGGCTACTGAGGGACTACCAGGAGCTCATGAACACC
AAGCTGTCCCTGGATGTGGAGATTGCCACCTACAGGAAGCTGCTGGAGGGGGAAGAGTGCAGGATGTCTG
GAGACTTCAGCGACAACGTGTCTGTGTCCATCACAAGCAGCACCATCTCCTCATCTGTGGCATCTAAGAC
TGGCTTCGGCTCTGGGGGTCAAAGTTCTGGAGGAAGAGGGTCTTATGGAGGACGAGGAGGAGGAGGAGGA
GGAGGAAGCACCTATGGCTCTGGAGGCAGAAGCTCTGGCTCCAGAGGATCTGGATCCGGATCTGGAGGAG
GAGGATACAGCTCTGGAGGAGGTTCCAGGGGAGGATCTGGAGGAGGATATGGCTCTGGAGGAGGCTCCAG
GGGAGGATCTGGAGGAGGATACGGCTCTGGAGGTGGCTCCGGCTCTGGAGGAGGATACAGCTCTGGAGGA
GGCTCCAGGGGAGGATCTGGAGGAGGAGGAGTCAGCTCTGGAGGAGGCTCTAGAGGAGGCTCCAGCTCTG
GAGGAGGCTCCAGAGGTGGCTCCAGCTCTGGTGGGGGAGGATATAGTTCTGGAGGAGGCTCCAGAGGTGG
CTCCAGCTCAGGAGGAGCAGGATCTAGCTCTGAAAAGGGAGGTTCTGGGTCAGGGGAAGGTTGTGGCTCA
GGTGTGACCTTCTCCTTTAGATAG

Translation (707 aa):
MSCQISCRSRRGGGGGGGGGFRGFSSGSAVVSGGSRRSNTSFSCISRHGGGRGGSGGGGFGSQSLVGLGG
YKSISSSVAGNSGGYGGSSFGGSSGFGGGRGFGGGQGFGGSGGFGGGSGFGGGQGFGGGSRFGGGSGFGG
GGFGGGSFGGGRFGGGPGGFGGPGGFPGGGIHEVSVNQSLLQPLDVKVDPEIQNVKSQEREQIKTLNNKF
ASFIDKVRFLEQQNQVLRTKWELLQQLDVGSRTTNLDPIFQAYIGMLKKQVDRLSAERTSQESELNNMQD
LVEDFKKKYEDEINKRTSAENDFVTIKKDVDSCYMDKTELQARLDILAQEVNFLRTLYDAELSQLQQDVT
DTNVILSMDNNRNLDLDSIIAEVQNQYEMIAHKSKAESEELYHSKYEELQVTAVKHGDSLKEIKMEISEL
NRTIQRLQGEISHVKKQCKGVQDSIADAEQRGEHAIKDARGKLTDLEEALQQCREDLARLLRDYQELMNT
KLSLDVEIATYRKLLEGEECRMSGDFSDNVSVSITSSTISSSVASKTGFGSGGQSSGGRGSYGGRGGGGG
GGSTYGSGGRSSGSRGSGSGSGGGGYSSGGGSRGGSGGGYGSGGGSRGGSGGGYGSGGGSGSGGGYSSGG
GSRGGSGGGGVSSGGGSRGGSSSGGGSRGGSSSGGGGYSSGGGSRGGSSSGGAGSSSEKGGSGSGEGCGS
GVTFSFR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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