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Report for CCDS90218.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
90218.1 Public Mus musculus 7 Zfp819 23 108 98 CCDS HistoryNCBI Gene:74400Re-query CCDS DB by CCDS ID:90218.1Re-query CCDS DB by GeneID:74400See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 90218.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000120935.1 ENSMUSP00000113867.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000120935.1Link to Ensembl Protein Viewer:ENSMUSP00000113867.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000120935Re-query CCDS DB by Protein ID:ENSMUSP00000113867
Original member Current member NCBI NM_001355131.1 NP_001342060.1 Accepted alive Link to Nucleotide Sequence:NM_001355131.1Link to Protein Sequence:NP_001342060.1Re-query CCDS DB by Nucleotide ID:NM_001355131Re-query CCDS DB by Protein ID:NP_001342060Link to BLAST:NP_001342060.1

Chromosomal Locations for CCDS 90218.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43612576 43612639 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43616387 43617918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1596 nt):
ATGAAGAAAGTTAAGGACTCGCCGATGGGGAAGGTTGATTTCCCACATCAGAGGTGTGGTCAAGGGGAGG
CAGAGCATGACTCACACCAAATGTGTGTGAAGGCTGCATTTCCAAATGATGTATCAAGAGTAATCACTAC
AGGTGGCTCATATTGTTCCATTATCGAGGAACCGTGGCAGGGTGGTGACCCTAAAACTTCAGATCCGCAA
AACCACATCCCACCCTCGAGTTCTGGTGCTTTCTTCAGCCAGAAAACACTAATCACAGATGGACGTGAAG
CAGCTGGGGGATCCATTCCTTTAGGCGCCCACGTCATTTCTACACAAAAGAGATCTCTGAGATGTTGCCC
GTGTGAAAAGACGTTGCAGCCTCACCTTCAAGCAGACAGAGACCATCAAAGCAGTGCCACAGAGCAGCCT
GACGGCATTGTTGACTCTTGTCAGTCCTTCACACAAGGCCTTCCCACTGCTGTGTGTCCAATTCACAGCA
CAGGAGAGGAAGCACGCAGAGGGGACCAATGTGCAAGTGTTCCCAGCCCTCAGCAACCATTTATGCAGCA
TGGAACTCTTTCTCAGGACAAGCCAGTTGAATATACCAAATACGAGAAGGTCTTCACTGCCGGGTCAGCT
TTGTGTCAGCAGCAAACAACTAACCCTCTAGAGACACATTTTATTTGCCACATATGTGGGAAATCCTTCC
TTCAGAAATCTGAGTTGAGTTTTCATCCAGGAACAGACAGAGGAGAGACACATCATGGATGTCCTGGCTG
TCGGAAATCACTTCCCAGTACATCCAGCCTGCAGGCACGGCATGGAACTCACACAAAGGAGAAACCTTAC
AGATGCCCTGACTGTGGGAAGTCATTCAGTTATGCATCCCACCTAAAGATCCATCTTCGAATACACACAG
GTGAGAGGCCTTATGTGTGTTCTGACTGTGGGAAGGCCTTTAGCCAAAAGTCAGTCCTCACCACGCATCG
GAGAATCCACACTGGGGAGAGGCCTTACACATGTAACCACTGCGGGAAATTGTTTGTCTATGCATCAGAT
CTGAAGAAACACAGTCGGTTTCACACAGGGGAGAAGCCCTATGAGTGCAGAGATTGTGGGAAGTTATTCA
ATAATAAATCTCACCTGCCTGTGCACTATCGCATTCACACCGGTGAGAAACCTTACAGATGCTGCGACTG
TGGGAAGTCGTTCAGGAGAAAGTCCCACCTTAAAGTGCATAGCCGAACACACACTGGTGAGAAGCCTTAT
GAATGCCCTGACTGCGGAAGGGCCTTCAGCCACAGTTCAGTTCTCAGCACACATCAGAGAATTCACACTG
GGGAGAGGCCTTACCTATGCAGCGACTGTGGGAAGGCCATGTCTTCTAAAGCCCAGCTGAATGAGCACCG
AAGGATCCACACGGGGGAGAAACCCTATGTGTGCAGCGAGTGTGGGAAAGCTTTCAGTTGCCGATCTTCC
TTACAAGCACATCGTAGAACTCACAGTAGGGAAAAGCCGTTTGTCTGTCACACATGTGGGAAGGGCTTCC
TGCACAAGTCACAGTTGTCATCTCACCAACAAACTCACACTGGTGAGAACCCTTAG

Translation (531 aa):
MKKVKDSPMGKVDFPHQRCGQGEAEHDSHQMCVKAAFPNDVSRVITTGGSYCSIIEEPWQGGDPKTSDPQ
NHIPPSSSGAFFSQKTLITDGREAAGGSIPLGAHVISTQKRSLRCCPCEKTLQPHLQADRDHQSSATEQP
DGIVDSCQSFTQGLPTAVCPIHSTGEEARRGDQCASVPSPQQPFMQHGTLSQDKPVEYTKYEKVFTAGSA
LCQQQTTNPLETHFICHICGKSFLQKSELSFHPGTDRGETHHGCPGCRKSLPSTSSLQARHGTHTKEKPY
RCPDCGKSFSYASHLKIHLRIHTGERPYVCSDCGKAFSQKSVLTTHRRIHTGERPYTCNHCGKLFVYASD
LKKHSRFHTGEKPYECRDCGKLFNNKSHLPVHYRIHTGEKPYRCCDCGKSFRRKSHLKVHSRTHTGEKPY
ECPDCGRAFSHSSVLSTHQRIHTGERPYLCSDCGKAMSSKAQLNEHRRIHTGEKPYVCSECGKAFSCRSS
LQAHRRTHSREKPFVCHTCGKGFLHKSQLSSHQQTHTGENP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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