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Report for CCDS21152.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21152.1 Public Mus musculus 7 Nudt19 23 108 98 CCDS HistoryNCBI Gene:110959Re-query CCDS DB by CCDS ID:21152.1Re-query CCDS DB by GeneID:110959See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 21152.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000040962.5 ENSMUSP00000047778.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000040962.5Link to Ensembl Protein Viewer:ENSMUSP00000047778.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000040962Re-query CCDS DB by Protein ID:ENSMUSP00000047778
Original member Current member NCBI NM_033080.2 NP_149071.2 Accepted alive Link to Nucleotide Sequence:NM_033080.2Link to Protein Sequence:NP_149071.2Re-query CCDS DB by Nucleotide ID:NM_033080Re-query CCDS DB by Protein ID:NP_149071Link to BLAST:NP_149071.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_149071.2 357 P11930 357 100% 0 0

Chromosomal Locations for CCDS 21152.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 35547909 35548123 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35551454 35551661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 35555154 35555804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1074 nt):
ATGAGCAGCTCGAGCAGCTGGCGGCGGGCAGCCACCGTGATGTTGGCAGCAGGCTGGACCCACTCGAGCC
CGGCCGGCTTCCGGCTGCTGCTTCTCCAGCGAGCACAAAACCAGCGCTTCTTGCCCGGCGCGCACGTCTT
CCCGGGCGGCGTGCTGGACGCGGCCGACAGCTCACCCGACTGGGTGCGTCTGTTCGCGCCTCGGCACACG
CCGCCGCGCTTCGGCCTAGGCCCGGAGCCCCCTCGGCAACCCCCCTTCCCCGGGCTGTCCCACGGCGACG
CGGACCCCGCGGCGCTGCCCGATGACGTAGCGCTGCGCATCTGTGCCATCCGCGAAGCCTTCGAGGAGGC
GGGGGTGCTGCTCCTGCGGCCGCGGGACGCGGCTCCAGCTTCTCAGGAGCCCAGTCAGGCGCTGTCGCCT
CCGGCCGGCCTGGCCGAATGGCGCTCGCGCGTGCGCAGTGACCCGCGCTGCTTCCTCCAGCTGTGTGCGC
ACCTAGACTGCACGCCTGACATCTGGGCGCTGCACGACTGGGGCGGATGGCTCACCCCGTATGGGCGAAC
CATCCGCCGTTTCGACACCACCTTCTTCCTGTGCTGCCTGCGCGACATTCCGCGCGTGGAGCCCGACGTG
GCCGAGGTGGTGGGCTACCAGTGGTTGTCCCCATCAGAGGCAACTGAATGTTTCCTATCAAAAGAAATCT
GGCTGGCACCACCACAGTTCTATGAAATGAGAAGACTTGAAAACTTTGCCTCTCTCTCTGCTCTGTATAG
ATTTTGTTCGGATCGCCCATCAGAAGTACCTGAGAAATGGCTGCCAATAATACTTTTAACTTCTGATGGC
ACCATCCATCTTCTCCCAGGAGATGAGCTGTATGTGAAAGACTCAGACTTCTTGGAAAAGAATATGTCTA
CTGACAAAAAGACTGAAGAAATCGTGAAGGAAGGCAAAGTCCTTAACCGAGTTGTGATCCACAGTCCCTA
TGTGTACGAAATCTACATGACTCTTCCGTCAGAGAATAAGCACGTGTACCCTAGGAACTACATAGTGAAT
AAGAGATGTACTGCCCACCTGTAA

Translation (357 aa):
MSSSSSWRRAATVMLAAGWTHSSPAGFRLLLLQRAQNQRFLPGAHVFPGGVLDAADSSPDWVRLFAPRHT
PPRFGLGPEPPRQPPFPGLSHGDADPAALPDDVALRICAIREAFEEAGVLLLRPRDAAPASQEPSQALSP
PAGLAEWRSRVRSDPRCFLQLCAHLDCTPDIWALHDWGGWLTPYGRTIRRFDTTFFLCCLRDIPRVEPDV
AEVVGYQWLSPSEATECFLSKEIWLAPPQFYEMRRLENFASLSALYRFCSDRPSEVPEKWLPIILLTSDG
TIHLLPGDELYVKDSDFLEKNMSTDKKTEEIVKEGKVLNRVVIHSPYVYEIYMTLPSENKHVYPRNYIVN
KRCTAHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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