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Report for CCDS18608.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
18608.1 Public Mus musculus 4 Bmp8b 23 108 98 CCDS HistoryNCBI Gene:12164Re-query CCDS DB by CCDS ID:18608.1Re-query CCDS DB by GeneID:12164See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 18608.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000002457.1 ENSMUSP00000002457.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000002457.1Link to Ensembl Protein Viewer:ENSMUSP00000002457.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000002457Re-query CCDS DB by Protein ID:ENSMUSP00000002457
Original member Current member NCBI NM_007559.5 NP_031585.2 Accepted alive Link to Nucleotide Sequence:NM_007559.5Link to Protein Sequence:NP_031585.2Re-query CCDS DB by Nucleotide ID:NM_007559Re-query CCDS DB by Protein ID:NP_031585Link to BLAST:NP_031585.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031585.2 399 P55105 399 100% 0 0

Chromosomal Locations for CCDS 18608.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 123105351 123105675 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123114568 123114757 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123115146 123115294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123121886 123122080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123122516 123122595 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123122947 123123057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 123124388 123124537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1200 nt):
ATGGCTGCGCGTCCGGGACTCCTATGGCTACTGGGCCTGGCTCTGTGCGTGTTGGGCGGCGGTCACCTCT
CGCATCCCCCGCACGTCTTTCCCCAGCGTCGACTAGGAGTACGCGAGCCCCGCGACATGCAGCGCGAGAT
TCGGGAGGTGCTGGGGCTGCCGGGGCGGCCCCGATCCCGAGCACCGGTCGGGGCTGCCCAGCAGCCAGCG
TCTGCGCCCCTCTTTATGTTGGACCTGTACCGTGCCATGACGGATGACAGTGGCGGTGGGACCCCGCAGC
CTCACTTGGACCGTGCTGACCTGATTATGAGCTTTGTCAACATAGTGGAACGCGACCGTACCCTGGGCTA
CCAGGAGCCACACTGGAAGGAATTCCACTTTGACCTAACCCAGATCCCTGCTGGGGAGGCTGTCACAGCT
GCTGAGTTCCGGATCTACAAAGAACCCAGTACCCACCCGCTCAACACAACCCTCCACATCAGCATGTTCG
AAGTGGTCCAAGAGCACTCCAACAGGGAGTCTGACTTGTTCTTTTTGGATCTTCAGACGCTCCGATCTGG
GGACGAGGGCTGGCTGGTGCTGGACATCACAGCAGCCAGTGACCGATGGCTGCTGAACCATCACAAGGAC
CTAGGACTCCGCCTCTATGTGGAAACCGAGGATGGGCACAGCATAGATCCTGGCCTAGCTGGTCTGCTTG
GACGACAAGCACCACGCTCCAGACAGCCTTTCATGGTTGGTTTCTTCAGGGCCAACCAGAGTCCTGTGCG
GGCCCCTCGAACAGCAAGACCACTGAAGAAGAAGCAGCTAAATCAAATCAACCAGCTGCCGCACTCCAAC
AAACACCTAGGAATCCTTGATGATGGCCACGGTTCTCACGGCAGAGAAGTTTGCCGCAGGCATGAGCTCT
ATGTCAGCTTCCGTGACCTTGGCTGGCTGGACTCTGTCATTGCCCCCCAGGGCTACTCCGCCTATTACTG
TGCTGGGGAGTGCATCTACCCACTGAACTCCTGTATGAACTCCACCAACCACGCCACTATGCAGGCCCTG
GTACATCTGATGAAGCCAGATATCATCCCCAAGGTGTGCTGTGTGCCTACTGAGCTGAGTGCCATTTCTC
TGCTCTACTATGATAGAAACAATAATGTCATCCTGCGCAGGGAGCGCAACATGGTAGTCCAGGCCTGTGG
CTGCCACTGA

Translation (399 aa):
MAARPGLLWLLGLALCVLGGGHLSHPPHVFPQRRLGVREPRDMQREIREVLGLPGRPRSRAPVGAAQQPA
SAPLFMLDLYRAMTDDSGGGTPQPHLDRADLIMSFVNIVERDRTLGYQEPHWKEFHFDLTQIPAGEAVTA
AEFRIYKEPSTHPLNTTLHISMFEVVQEHSNRESDLFFLDLQTLRSGDEGWLVLDITAASDRWLLNHHKD
LGLRLYVETEDGHSIDPGLAGLLGRQAPRSRQPFMVGFFRANQSPVRAPRTARPLKKKQLNQINQLPHSN
KHLGILDDGHGSHGREVCRRHELYVSFRDLGWLDSVIAPQGYSAYYCAGECIYPLNSCMNSTNHATMQAL
VHLMKPDIIPKVCCVPTELSAISLLYYDRNNNVILRRERNMVVQACGCH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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