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Report for CCDS15691.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
15691.1 Public Mus musculus 2 Pter 23 108 98 CCDS HistoryNCBI Gene:19212Re-query CCDS DB by CCDS ID:15691.1Re-query CCDS DB by GeneID:19212See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 15691.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000134794.7 ENSMUSP00000117009.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000134794.7Link to Ensembl Protein Viewer:ENSMUSP00000117009.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000134794Re-query CCDS DB by Protein ID:ENSMUSP00000117009
Original member Current member NCBI NM_008961.3 NP_032987.1 Accepted alive Link to Nucleotide Sequence:NM_008961.3Link to Protein Sequence:NP_032987.1Re-query CCDS DB by Nucleotide ID:NM_008961Re-query CCDS DB by Protein ID:NP_032987Link to BLAST:NP_032987.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_032987.1 349 Q60866-1 349 100% 0 0

Chromosomal Locations for CCDS 15691.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 12978186 12978617 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12980293 12980558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 12994750 12994890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 13000857 13001067 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1050 nt):
ATGTCTTCCTTAAGTGGGAAAGTACAAACAGTTCTGGGCCTTGTAGAACCCAGCCAACTGGGACGCACCC
TGACCCACGAGCATCTGACAATGACCTTTGACAGTTTTTACTGCCCACCTCCTCCATGCCACGAAGTCAC
CTCCAAGGAACCTATCATGATGAAAAATCTATTTTGGATTCAGAAAAACCCCTATTCCCATCGAGAGAAC
CTTCAGTTGAATCAGGAGGTAGGAGCCATAAGAGAAGAGCTGTTGTATTTCAAGGCTAAGGGCGGAGGAG
CCTTGGTGGAGAATACGACAACTGGGCTCAGCAGGGACGTGCATACGCTGAAGTGGCTGGCAGAGCAGAC
TGGAGTCCACATCATAGCTGGAGCTGGGTTTTATGTTGATGCAACTCACTCTGCAGCAACCAGAGCCATG
TCAGTGGAGCAGCTTACAGATGTCCTTATTAATGAAATTCTCCATGGAGCTGATGGCACCAGCATCAAGT
GTGGAGTTATTGGAGAAATTGGCTGCTCCTGGCCTTTGACTGACAGCGAGAGAAAGATACTTGAGGCTAC
AGCTCACGCCCAGGCTCAGCTTGGCTGTCCTGTCATCATCCATCCTGGACGGAACCCAGGTGCACCATTC
CAGATAATCCGTATACTGCAAGAAGCAGGAGCAGACATCTCCAAAACAGTCATGTCCCACCTTGACAGGA
CTATATTTGATAAGAAAGAGCTGCTGGAGTTTGCTCAACTTGGCTGCTACTTGGAATACGATCTCTTTGG
TACGGAACTCCTTAATTACCAGTTGAGCCCAGATATTGATATGCCTGATGATAACAAAAGAATTAGAAGG
GTCCATTTTCTAGTGGATGAGGGCTATGAAGATCGGATTCTCATGGCACATGACATACACACAAAGCATC
GGTTGATGAAGTACGGAGGTCACGGCTACTCACACATCCTTACCAACATTGTTCCTAAGATGCTCCTTAG
AGGTCTGACTGAGAGGGTGCTTGACAAGATACTCATAGAAAACCCTAAACAATGGCTGACTTTTAAATAG

Translation (349 aa):
MSSLSGKVQTVLGLVEPSQLGRTLTHEHLTMTFDSFYCPPPPCHEVTSKEPIMMKNLFWIQKNPYSHREN
LQLNQEVGAIREELLYFKAKGGGALVENTTTGLSRDVHTLKWLAEQTGVHIIAGAGFYVDATHSAATRAM
SVEQLTDVLINEILHGADGTSIKCGVIGEIGCSWPLTDSERKILEATAHAQAQLGCPVIIHPGRNPGAPF
QIIRILQEAGADISKTVMSHLDRTIFDKKELLEFAQLGCYLEYDLFGTELLNYQLSPDIDMPDDNKRIRR
VHFLVDEGYEDRILMAHDIHTKHRLMKYGGHGYSHILTNIVPKMLLRGLTERVLDKILIENPKQWLTFK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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