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Report for CCDS30652.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30652.1 Public Homo sapiens 1 AHDC1 24 110 108 CCDS HistoryNCBI Gene:27245Re-query CCDS DB by CCDS ID:30652.1Re-query CCDS DB by GeneID:27245See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30652.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000247087.10 ENSP00000247087.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000247087.10Link to Ensembl Protein Viewer:ENSP00000247087.4Re-query CCDS DB by Nucleotide ID:ENST00000247087Re-query CCDS DB by Protein ID:ENSP00000247087
Original member Current member EBI ENST00000374011.6 ENSP00000363123.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000374011.6Link to Ensembl Protein Viewer:ENSP00000363123.2Re-query CCDS DB by Nucleotide ID:ENST00000374011Re-query CCDS DB by Protein ID:ENSP00000363123
Original member Current member EBI ENST00000642416.1 ENSP00000494394.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642416.1Link to Ensembl Protein Viewer:ENSP00000494394.1Re-query CCDS DB by Nucleotide ID:ENST00000642416Re-query CCDS DB by Protein ID:ENSP00000494394
Original member Current member EBI ENST00000642245.1 ENSP00000495072.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000642245.1Link to Ensembl Protein Viewer:ENSP00000495072.1Re-query CCDS DB by Nucleotide ID:ENST00000642245Re-query CCDS DB by Protein ID:ENSP00000495072
Original member Current member EBI ENST00000644989.1 ENSP00000495665.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000644989.1Link to Ensembl Protein Viewer:ENSP00000495665.1Re-query CCDS DB by Nucleotide ID:ENST00000644989Re-query CCDS DB by Protein ID:ENSP00000495665
Original member Current member EBI ENST00000673934.1 ENSP00000501218.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000673934.1Link to Ensembl Protein Viewer:ENSP00000501218.1Re-query CCDS DB by Nucleotide ID:ENST00000673934Re-query CCDS DB by Protein ID:ENSP00000501218
Original member Current member NCBI NM_001029882.3 NP_001025053.1 Accepted alive Link to Nucleotide Sequence:NM_001029882.3Link to Protein Sequence:NP_001025053.1Re-query CCDS DB by Nucleotide ID:NM_001029882Re-query CCDS DB by Protein ID:NP_001025053Link to BLAST:NP_001025053.1
Original member Current member NCBI NM_001371928.1 NP_001358857.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001371928.1Link to Protein Sequence:NP_001358857.1Re-query CCDS DB by Nucleotide ID:NM_001371928Re-query CCDS DB by Protein ID:NP_001358857Link to BLAST:NP_001358857.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001025053.1 1603 Q5TGY3 1603 100% 0 0
NP_001358857.1 1603 Q5TGY3 1603 100% 0 0

Chromosomal Locations for CCDS 30652.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 27547304 27552115 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4812 nt):
ATGCGTGTGAAGCCCCAGGGCCTGGTGGTGACTTCCAGTGCCGTGTGCAGCTCTCCTGACTACCTCCGGG
AACCCAAGTACTACCCCGGCGGCCCCCCCACCCCCCGGCCCCTGCTTCCCACCCGGCCCCCTGCCAGCCC
ACCTGACAAGGCCTTCTCCACCCACGCCTTCTCCGAGAACCCACGCCCACCCCCACGCCGGGACCCCAGC
ACCCGGCGCCCACCAGTCCTTGCCAAGGGGGACGACCCGCTGCCCCCACGGGCAGCCCGTCCTGTCTCAC
AGGCCCGCTGCCCCACACCGGTCGGAGACGGCAGCAGCTCCCGACGCTGCTGGGACAACGGGCGGGTGAA
CCTGCGACCAGTGGTGCAGCTGATTGACATCATGAAGGACCTGACACGCCTCTCCCAGGACCTGCAGCAC
AGTGGTGTACACCTGGACTGTGGTGGGCTCCGACTGAGCCGCCCGCCTGCACCGCCACCCGGCGACCTAC
AGTACAGCTTCTTCTCCTCACCCAGTTTGGCCAACAGCATCCGTAGCCCTGAGGAGCGGGCCACCCCACA
CGCCAAGTCGGAGCGGCCCAGCCATCCCCTCTACGAGCCTGAGCCTGAGCCTAGGGACAGTCCCCAGCCT
GGCCAAGGCCATAGTCCCGGAGCCACGGCTGCGGCCACGGGTCTGCCCCCAGAGCCTGAGCCAGACAGCA
CTGATTACTCAGAACTTGCTGACGCCGACATCCTTAGTGAGCTGGCCTCCCTCACTTGCCCAGAGGCCCA
GCTGCTAGAGGCCCAGGCCCTCGAGCCACCATCGCCCGAGCCGGAGCCTCAGCTCCTGGACCCCCAGCCC
CGCTTCCTGGACCCGCAGGCACTAGAGCCGCTCGGGGAAGCTCTGGAGCTGCCACCCCTGCAACCTCTTG
CTGATCCTCTGGGGCTGCCGGGCCTGGCTCTCCAGGCCCTGGACACCCTGCCTGACTCCTTGGAGTCGCA
GCTGCTTGACCCCCAGGCACTCGACCCCCTGCCCAAGCTGCTTGACGTCCCAGGTCGCCGTCTGGAGCCC
CAGCAGCCCCTGGGGCACTGCCCACTGGCCGAGCCCTTGCGCCTGGACTTGTGCTCACCGCACGGCCCCC
CCGGGCCTGAGGGTCACCCCAAGTACGCCTTGCGGCGCACTGATAGGCCAAAGATCCTGTGTCGCCGGCG
GAAAGCCGGACGGGGACGCAAGGCAGACGCCGGACCCGAGGGCCGCCTACTGCCCCTGCCTATGCCCACG
GGGCTGGTGGCTGCCCTGGCCGAACCCCCACCACCACCGCCTCCTCCACCCCCTGCCCTGCCAGGCCCAG
GCCCGGTCTCAGTCCCAGAGTTGAAGCCGGAATCTTCCCAGACCCCAGTGGTCTCTACCCGCAAAGGCAA
GTGCCGGGGCGTGCGGCGCATGGTGGTGAAGATGGCCAAGATCCCCGTATCGCTGGGGCGGCGGAACAAG
ACCACATACAAAGTGTCTTCCTTGAGCAGCAGCCTGAGCGTGGAGGGCAAGGAGCTGGGCCTGCGCGTGT
CGGCTGAGCCCACCCCGCTGCTGAAGATGAAGAACAATGGGCGGAACGTGGTAGTGGTCTTCCCACCCGG
TGAGATGCCCATTATTCTCAAACGTAAGCGCGGCCGCCCTCCTAAGAACCTGCTGCTGGGTCCCGGCAAG
CCCAAGGAGCCAGCTGTGGTGGCGGCCGAGGCAGCCACTGTGGCAGCGGCCACCATGGCCATGCCAGAGG
TAAAAAAACGACGGCGGCGGAAGCAGAAGCTGGCATCTCCCCAGCCATCCTATGCAGCAGACGCCAACGA
CAGCAAGGCCGAGTACTCAGACGTCCTGGCCAAGCTGGCCTTCCTGAACCGCCAGAGCCAGTGCGCTGGA
CGGTGCTCACCGCCCCGCTGCTGGACACCCAGTGAGCCGGAGTCGGTGCACCAGGCCCCCGACACCCAGA
GCATCTCCCACTTCCTGCATCGTGTGCAGGGCTTCCGGCGGCGTGGGGGCAAAGCAGGCGGTTTTGGTGG
CCGGGGTGGGGGCCATGCGGCCAAGTCAGCCCGATGCTCCTTCAGTGACTTCTTTGAGGGCATCGGCAAG
AAAAAGAAGGTGGTGGCCGTGGCAGCCGCTGGGGTCGGGGGCCCGGGCCTTACTGAGTTGGGGCACCCAC
GCAAACGGGGCCGGGGGGAGGTAGACGCTGTGACTGGGAAGCCAAAGCGCAAGAGACGGTCCCGGAAGAA
TGGGACTCTGTTCCCAGAGCAGGTGCCCAGTGGCCCAGGCTTTGGGGAGGCAGGTGCTGAGTGGGCCGGG
GATAAGGGTGGTGGCTGGGCCCCTCACCATGGGCACCCAGGCGGACAAGCTGGCCGAAACTGTGGGTTTC
AGGGGACCGAGGCCCGGGCCTTTGCCTCCACTGGGCTGGAGAGTGGAGCCTCAGGCCGTGGCAGCTACTA
CAGCACGGGTGCACCCTCAGGCCAGACCGAGCTCAGCCAGGAGCGCCAAAACCTCTTCACCGGCTACTTT
CGCTCGCTGCTCGATTCGGATGACTCCTCCGATCTCTTGGACTTTGCCCTCTCAGCCTCTCGCCCAGAGT
CCCGGAAGGCATCGGGCACCTATGCAGGGCCACCCACCAGTGCCCTGCCTGCCCAGCGGGGCCTGGCCAC
CTTCCCTAGCCGGGGAGCCAAGGCCAGCCCAGTGGCAGTGGGTAGCAGCGGGGCTGGGGCGGACCCCTCC
TTTCAGCCTGTCCTGTCCGCGCGCCAGACCTTCCCACCAGGACGAGCAGCAAGCTATGGGCTAACTCCAG
CCGCTTCAGACTGCCGGGCAGCCGAGACCTTCCCCAAGCTGGTGCCCCCGCCCTCAGCCATGGCCCGCTC
ACCTACCACCCACCCGCCTGCCAACACCTACCTGCCCCAGTACGGCGGCTATGGGGCCGGACAAAGCGTA
TTCGCCCCAACTAAGCCCTTTACAGGCCAGGACTGCGCTAACAGCAAGGACTGCAGCTTCGCCTATGGCA
GTGGCAACAGCCTCCCTGCCTCACCCAGCAGCGCCCACAGCGCCGGCTATGCCCCACCGCCTACCGGGGG
CCCCTGCCTGCCACCAAGCAAGGCCTCCTTCTTCAGCAGCTCTGAGGGGGCCCCCTTCTCTGGTTCAGCC
CCCACGCCCCTGCGCTGTGACAGCCGGGCCAGCACAGTCTCGCCCGGTGGCTACATGGTACCCAAGGGCA
CCACAGCCTCTGCCACCTCTGCAGCCTCTGCCGCCTCCTCCTCCTCCTCCTCCTTCCAGCCCTCGCCCGA
GAACTGTCGGCAGTTTGCGGGGGCTTCTCAGTGGCCTTTCCGGCAGGGCTATGGAGGCCTGGACTGGGCC
TCAGAGGCCTTTAGTCAGCTCTACAATCCCAGTTTTGACTGCCACGTCAGCGAGCCCAACGTGATCCTGG
ACATCTCCAACTACACACCGCAGAAGGTGAAGCAGCAGACGGCTGTGTCGGAGACCTTCTCTGAGTCATC
CTCCGACAGCACCCAGTTCAATCAGCCGGTTGGTGGCGGGGGGTTTCGGCGTGCCAACAGCGAGGCCTCA
AGTAGTGAGGGCCAGTCGAGCCTGTCCAGCCTGGAGAAACTGATGATGGACTGGAACGAGGCATCATCTG
CCCCCGGCTACAACTGGAACCAGAGTGTCCTCTTTCAGAGTAGCTCCAAGCCGGGCCGTGGACGGCGGAA
GAAGGTGGACCTGTTCGAGGCCTCACATCTGGGCTTCCCGACATCCGCCTCTGCCGCTGCCTCAGGCTAC
CCATCCAAACGGAGCACTGGGCCCCGGCAGCCGCGAGGTGGACGGGGCGGTGGGGCCTGCTCAGCCAAGA
AGGAGCGGGGTGGCGCAGCGGCCAAAGCCAAGTTCATCCCCAAGCCACAGCCAGTCAACCCACTGTTCCA
GGACAGTCCTGACCTCGGCCTGGACTACTATAGCGGGGACAGCAGCATGTCACCACTGCCCTCACAGTCG
AGGGCCTTCGGCGTGGGAGAGCGAGACCCCTGTGACTTCATAGGACCCTACTCCATGAACCCGTCCACGC
CTTCCGATGGCACCTTTGGCCAAGGCTTCCACTGCGACTCGCCCAGCCTGGGTGCTCCCGAGCTTGATGG
CAAGCATTTCCCACCGCTGGCCCACCCACCCACGGTGTTTGACGCCGGCCTGCAGAAGGCATACTCGCCC
ACCTGCTCGCCTACACTGGGCTTCAAGGAAGAGCTGCGGCCACCGCCCACAAAGCTGGCTGCCTGCGAGC
CCCTCAAGCATGGACTCCAGGGGGCCAGCCTGGGCCACGCAGCTGCAGCCCAGGCCCACCTGAGCTGCCG
GGACCTGCCGCTGGGCCAGCCCCACTACGATTCCCCCAGCTGCAAGGGCACAGCCTATTGGTACCCTCCA
GGCTCAGCTGCCCGCAGCCCGCCCTATGAAGGCAAGGTGGGTACAGGGCTGCTGGCTGACTTCCTGGGCA
GGACGGAGGCCGCGTGCCTCAGTGCCCCTCACCTGGCTAGCCCACCAGCCACGCCCAAGGCCGACAAGGA
GCCACTGGAAATGGCCCGGCCCCCTGGCCCACCCCGTGGCCCTGCTGCAGCCGCTGCTGGCTATGGCTGC
CCACTCCTTAGTGACTTGACCCTGTCCCCCGTGCCGAGGGACTCGCTGCTGCCCCTGCAGGACACCGCCT
ACAGGTACCCAGGCTTTATGCCCCAGGCGCATCCTGGCCTGGGTGGGGGCCCCAAGAGCGGCTTCCTGGG
GCCCATGGCGGAACCTCACCCCGAGGACACATTCACCGTCACATCCCTGTAG

Translation (1603 aa):
MRVKPQGLVVTSSAVCSSPDYLREPKYYPGGPPTPRPLLPTRPPASPPDKAFSTHAFSENPRPPPRRDPS
TRRPPVLAKGDDPLPPRAARPVSQARCPTPVGDGSSSRRCWDNGRVNLRPVVQLIDIMKDLTRLSQDLQH
SGVHLDCGGLRLSRPPAPPPGDLQYSFFSSPSLANSIRSPEERATPHAKSERPSHPLYEPEPEPRDSPQP
GQGHSPGATAAATGLPPEPEPDSTDYSELADADILSELASLTCPEAQLLEAQALEPPSPEPEPQLLDPQP
RFLDPQALEPLGEALELPPLQPLADPLGLPGLALQALDTLPDSLESQLLDPQALDPLPKLLDVPGRRLEP
QQPLGHCPLAEPLRLDLCSPHGPPGPEGHPKYALRRTDRPKILCRRRKAGRGRKADAGPEGRLLPLPMPT
GLVAALAEPPPPPPPPPPALPGPGPVSVPELKPESSQTPVVSTRKGKCRGVRRMVVKMAKIPVSLGRRNK
TTYKVSSLSSSLSVEGKELGLRVSAEPTPLLKMKNNGRNVVVVFPPGEMPIILKRKRGRPPKNLLLGPGK
PKEPAVVAAEAATVAAATMAMPEVKKRRRRKQKLASPQPSYAADANDSKAEYSDVLAKLAFLNRQSQCAG
RCSPPRCWTPSEPESVHQAPDTQSISHFLHRVQGFRRRGGKAGGFGGRGGGHAAKSARCSFSDFFEGIGK
KKKVVAVAAAGVGGPGLTELGHPRKRGRGEVDAVTGKPKRKRRSRKNGTLFPEQVPSGPGFGEAGAEWAG
DKGGGWAPHHGHPGGQAGRNCGFQGTEARAFASTGLESGASGRGSYYSTGAPSGQTELSQERQNLFTGYF
RSLLDSDDSSDLLDFALSASRPESRKASGTYAGPPTSALPAQRGLATFPSRGAKASPVAVGSSGAGADPS
FQPVLSARQTFPPGRAASYGLTPAASDCRAAETFPKLVPPPSAMARSPTTHPPANTYLPQYGGYGAGQSV
FAPTKPFTGQDCANSKDCSFAYGSGNSLPASPSSAHSAGYAPPPTGGPCLPPSKASFFSSSEGAPFSGSA
PTPLRCDSRASTVSPGGYMVPKGTTASATSAASAASSSSSSFQPSPENCRQFAGASQWPFRQGYGGLDWA
SEAFSQLYNPSFDCHVSEPNVILDISNYTPQKVKQQTAVSETFSESSSDSTQFNQPVGGGGFRRANSEAS
SSEGQSSLSSLEKLMMDWNEASSAPGYNWNQSVLFQSSSKPGRGRRKKVDLFEASHLGFPTSASAAASGY
PSKRSTGPRQPRGGRGGGACSAKKERGGAAAKAKFIPKPQPVNPLFQDSPDLGLDYYSGDSSMSPLPSQS
RAFGVGERDPCDFIGPYSMNPSTPSDGTFGQGFHCDSPSLGAPELDGKHFPPLAHPPTVFDAGLQKAYSP
TCSPTLGFKEELRPPPTKLAACEPLKHGLQGASLGHAAAAQAHLSCRDLPLGQPHYDSPSCKGTAYWYPP
GSAARSPPYEGKVGTGLLADFLGRTEAACLSAPHLASPPATPKADKEPLEMARPPGPPRGPAAAAAGYGC
PLLSDLTLSPVPRDSLLPLQDTAYRYPGFMPQAHPGLGGGPKSGFLGPMAEPHPEDTFTVTSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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