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Report for CCDS38849.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
38849.1 Public Mus musculus 4 Mast2 23 108 98 CCDS HistoryNCBI Gene:17776Re-query CCDS DB by CCDS ID:38849.1Re-query CCDS DB by GeneID:17776See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Provisional (this record has not been manually reviewed by the collaboration)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 38849.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000106485.7 ENSMUSP00000102094.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106485.7Link to Ensembl Protein Viewer:ENSMUSP00000102094.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106485Re-query CCDS DB by Protein ID:ENSMUSP00000102094
Original member Current member NCBI NM_008641.3 NP_032667.2 Accepted alive Link to Nucleotide Sequence:NM_008641.3Link to Protein Sequence:NP_032667.2Re-query CCDS DB by Nucleotide ID:NM_008641Re-query CCDS DB by Protein ID:NP_032667Link to BLAST:NP_032667.2

Chromosomal Locations for CCDS 38849.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 116306815 116308337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116308647 116308840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116308925 116309061 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116309504 116309626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116309816 116310042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116310457 116310651 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116310748 116311022 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116311214 116311368 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116311679 116311788 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116311928 116312050 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116312291 116312392 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116312853 116313018 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116313693 116313825 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116314807 116314945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116315823 116316031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116316463 116316548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116316977 116317038 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116317709 116317841 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116319759 116319860 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116322264 116322473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116326073 116326148 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116327609 116327763 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116330391 116330469 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116337422 116337497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116352973 116353064 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116391603 116391634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116430406 116430548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116435444 116435591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 116463736 116463915 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5385 nt):
ATGAAGCGGAGCCGCTGCCGCGAGCGGCCGCAGCCGCCACCCGCCCGCCGGGAGGATGCGGCTCCGCGGA
CGGCCGAGTTGCCCCAGCCGCAGTCTTTGCCCCCGCGCCGGCGAGCGCCGCCCGGGAGGCAGCTACTGGA
GGAGCGGAGCGGGCCTTTGGGGCACGACAGCAGGGAGCAGGATATGGTTACTGGACTTAGTCCTCTGCTC
TTCAGGAAGCTTAGTAATCCTGACATATTTGCACCCACTGGAAAAGTTAAACTCCAGCGACAACTTAGTC
AGGATGACTGTAAGTTACGGAGAGGAAGCCTGGCAAGTTCTCTGTCGGGTAAGCAGCTGCTCCCTTTGTC
CAGCAGTGTACACAGCAGTGTGGGACAGGTAACTTGGCAGTCTACAGGAGAAGCATCAAACCTGGTTCGA
ATGAGAAACCAATCCCTTGGACAGTCTGCACCTTCCCTTACGGCTGGCTTGAAGGAATTGAGCCTTCCAA
GGAGAGGCAGCTTTTGTCGGACAAGTAACCGCAAGAGCTTGATTGTAACCTCCAGCACATCACCTACGCT
ACCAAGGCCACACTCCCCACTCCATGGCCACACAGGTAACAGTCCCTTGGACAGCCCCCGGAATTTCTCT
CCAAATGCTCCTGCTCACTTTTCCTTCGTTCCTGCCCGTAGGACTGATGGACGGCGCTGGTCTTTGGCCT
CGTTGCCTTCTTCAGGCTATGGAACCAACACTCCTAGCTCTACAGTCTCTTCATCATGTTCCTCACAAGA
AAAGCTTCATCAGTTACCTTTCCAGCCAACAGCTGATGAACTACACTTTCTGACGAAGCATTTTAGCACA
GAAAACGTACCAGATGAGGAGGGACGTCGGTCCCCAGCCATGCGGCCCCGTTCCCGCAGCCTCAGTCCTG
GACGGTCCCCAGTTTCCTTTGACAGTGAAATAATAATGATGAATCATGTGTACAAAGAAAGATTCCCCAA
GGCCACTGCACAGATGGAAGAGCGACTAGCTGACTTCATTTCCTCTAACACTCCAGATAGTGTGTTGCCC
TTGGCAGATGGAGCACTAAGCTTTATTCATCATCAGGTGATTGAGATGGCCCGAGACTGCCTGGATAAAT
CTCGGAGTGGCCTCATTACGTCACACTATTTCTATGAACTTCAAGAGAATTTGGAAAAGCTTCTGCAAGA
TGCTCACGAACGCTCAGAAAGCTCAGATGTAGCCTTTGTGATACAGCTGGTAAAAAAGTTGATGATCATC
ATTGCTCGCCCAGCTCGCCTCCTGGAATGCCTGGAGTTTGACCCTGAAGAATTTTACCACCTGTTAGAAG
CAGCTGAAGGTCATGCCAAAGAGGGACATGGAATTAAATGTGACATTCCCCGCTACATCGTTAGCCAGCT
GGGCCTAACTCGGGATCCCTTGGAGGAAATGGCCCAGTTGAGCAGCTATGACAGTCCAGATACTCCAGAG
ACAGATGATTCAGTTGAGGGTCGTGGGGTATCTCAGCCATCTCAGAAGACCCCCTCTGAAGAGGACTTTG
AAACCATTAAGCTCATCAGCAATGGCGCCTATGGGGCTGTCTTTCTGGTGCGGCACAAGTCCACGCGGCA
GCGCTTTGCAATGAAGAAGATTAATAAGCAAAACCTAATCCTACGGAACCAGATCCAGCAAGCATTTGTG
GAACGCGACATACTGACTTTCGCTGAAAACCCCTTTGTGGTCAGCATGTTCTGCTCCTTTGAGACCAAGC
GTCACTTATGCATGGTGATGGAATACGTAGAAGGGGGAGACTGTGCCACTCTGCTCAAGAACATCGGGGC
CCTACCTGTGGACATGGTACGCCTGTACTTTGCGGAAACTGTGCTGGCTTTGGAATACTTACACAACTAC
GGCATCGTGCACCGTGACCTCAAGCCTGACAACCTTCTGATTACATCCATGGGACACATCAAACTCACTG
ACTTTGGACTTTCTAAAATCGGCCTCATGAGTTTGACAACCAACTTGTATGAGGGTCATATTGAAAAGGA
TGCCCGGGAGTTCCTAGACAAGCAGGTATGCGGGACCCCGGAATACATAGCACCTGAGGTGATCCTGCGT
CAGGGATATGGGAAGCCAGTGGACTGGTGGGCCATGGGCATAATCCTGTATGAGTTCCTGGTGGGTTGCG
TCCCTTTCTTTGGAGACACTCCGGAGGAGCTCTTTGGGCAAGTGATCAGTGATGAGATCGTGTGGCCCGA
AGGTGATGACGCGCTTCCCCCAGATGCCCAAGACCTCACTTCCAAACTGCTTCATCAGAATCCACTAGAA
AGACTGGGCACAAGTAGTGCCTATGAAGTGAAGCAGCACCCATTCTTCATGGGTCTGGACTGGACAGGAC
TTCTACGGCAGAAGGCTGAATTTATACCTCAGCTGGAGTCAGAGGATGACACCAGCTACTTTGATACCCG
TTCAGAACGATACCACCATGTGGACTCTGAGGATGAGGAGGAAGTGAGTGAGGATGGCTGCCTTGAGATT
CGCCAGTTTTCTTCCTGCTCTCCAAGGTTCAGCAAGGTTTACAGTAGCATGGAACGGCTTTCCCTGCTTG
AGGAACGCCGGACACCACCTCCAACCAAGCGCAGCCTCAGTGAGGAAAAGGAAGATCACTCAGACGGCTT
GGCAGGACTGAAGGGCCGAGATCGCAGCTGGGTGATTGGGTCCCCTGAGATATTACGGAAGCGGTTATCT
GTGTCCGAGTCATCCCACACAGAGAGTGATTCGAGTCCTCCAATGACAGTGCGACATCGGTGTTCAGGCC
TCCCAGATGGGCCTCATTGCCCTGAGGAGACTAGTAGCACCCCTCGGAAGCAACAACAGGAAGGTATATG
GGTCCTCATTCCCCCATCTGGAGAGGGGTCATCTAGGCCTGTTCCTGAACGACCGTTGGAGAGGCAACTG
AAGCTGGATGAGGAGCCTCCTGGCCAAAGCAGTCGGTGTTGCCCAGCCCTGGAGACACGAGGCCGTGGGA
CCCCTCAGCTAGCTGAGGAAGCTACAGCCAAAGCCATCAGCGACCTAGCTGTGCGTAGGGCCCGTCACCG
GCTGCTCTCTGGGGACTCTATAGAGAAGCGCACCACTCGCCCTGTCAACAAAGTAATCAAGTCAGCCTCA
GCTACGGCCCTTTCCCTCCTCATTCCTTCAGAACACCATGCCTGCTCACCATTGGCCAGCCCTATGTCCC
CACATTCCCAGTCATCCAATCCATCATCCAGGGACTCTTCTCCAAGCAGGGACTTCTTGCCAGCCCTTGG
CAGCTTGAGGCCTCCCATCATCATCCACCGAGCTGGCAAGAAGTATGGCTTCACCCTGCGGGCCATTCGA
GTCTACATGGGTGACACTGATGTCTACACCGTACACCACATGGTGTGGCATGTGGAGGATGGTGGTCCAG
CCAGTGAAGCAGGGCTTCGTCAGGGTGACCTCATCACCCATGTCAATGGTGAGCCTGTGCATGGGCTAGT
CCACACAGAAGTGGTGGAGCTGGTTCTGAAGAGTGGAAACAAGGTATCAATTTCAACAACTCCCTTGGAG
AACACGTCAATCAAAGTGGGGCCAGCTAGGAAAGGCAGCTATAAAGCCAAGATGGCCCGAAGGAGCAAAC
GGAGCAAAGGCAAGGATGGGCAAGAAAGCCGAAAAAGAAGCTCCCTATTCCGGAAAATCACAAAGCAGGC
CTCCTTGCTCCACACCAGCCGCAGCCTTTCTTCCCTTAACCGCTCCTTGTCATCAGGGGAGAGTGGTCCA
GGCTCTCCCACACACAGCCACAGCCTCTCTCCCAGATCTCCTCCTCAGGGATACCGGGTAGCCCCAGATG
CTGTGCACTCAGTAGGAGGGAATTCCTCGCAGAGCAGCTCTCCCAGCTCCAGTGTGCCCAGTTCTCCTGC
TGGCTCTGGACATACACGGCCCAGCTCTCTTCACGGTCTGGCACCCAAGCTCCAACGCCAATACCGCTCA
CCACGGCGCAAGTCAGCAGGCAGCATCCCACTGTCACCGTTGGCCCACACCCCTTCCCCACCAGCAACGG
CAGCTTCACCTCAGCGTTCCCCATCACCCTTGTCTGGCCATGGGTCTCAGTCCTTTCCTACCAAACTTCA
CTTGTCTCCTCCGCTAGGTAGGCAGCTCTCACGGCCCAAGAGTGCAGAGCCACCCCGCTCTCCCCTACTT
AAGAGGGTGCAGTCTGCTGAGAAGCTGGCGGCTGCACTGGCAGCTGCTGAGAAGAAGTTAGCACCTTCCC
GCAAACATAGTCTTGACCTGCCCCATGGTGAACTAAAGAAGGAACTGACACCCAGGGAAGCCAGCCCTCT
GGAGGTAGTTGGAACCAGAAGTGTGCTATCCGGGAAAGGGCCACTTCCAGGAAAGGGGGTACTGCAGCCT
GCTCCTTCACGGGCCCTTGGGACCCTACGGCAGGATCGAGCTGAACGCCGTGAGTCACTGCAAAAACAAG
AAGCAATCCGGGAAGTAGACTCCTCAGAAGATGACACTGATGAGGAGCCTGAGAACAGCCAGGCCACACA
GGAGCCAAGATTGTCCCCCCACCCAGAAGCAAGCCACAATCTACTCCCTAAAGGTTCAGGAGAGGGTACA
GAAGAGGACACTTTCTTGCACAGGGATCTAAAGAAGCAGGGCCCTGTACTCTCAGGTCTAGTGACAGGGG
CCACACTAGGCTCCCCCCGAGTAGACGTTCCTGGGCTCTCCCCAAGGAAGCTCAGCAGGCCACAAGCCTT
TGAGGAAGCTACCAACCCCTTACAAGTCCCTAGCCTGAGCAGGTCTGGACCCACAAGCCCCACCCCCTCT
GAAGGCTGCTGGAAGGCCCAGCACCTCCACACACAGGCACTAACTGCACTTTGTCCCAGCTTTTCAGAAC
TTACCCCTACCGGTTGTTCTGCTGCCACCTCCACCTCTGGAAAGCCAGGGACATGGTCCTGGAAATTCCT
TATTGAGGGTCCAGACAGAGCATCCACGAACAAGACCATAACAAGGAAAGGTGAACCAGCTAACTCCCAA
GATACGAATACCACGGTCCCAAATCTTCTGAAGAACCTGTCTCCTGAGGAGGAGAAGCCACAGCCACCAA
GTGTGCCTGGGCTGACCCATCCGCTTCTTGAGGTCCCCAGCCAGAACTGGCCATGGGAGTCTGAATGTGA
ACAAATGGAGAAAGAAGAACCATCCCTGAGCATCACCGAAGTGCCTGATTCCTCAGGCGACAGGAGGCAG
GACATTCCATGCAGAGCCCACCCCCTGAGCCCAGAAACCCGGCCCAGCCTGCTCTGGAAAAGCCAAGAAC
TTGGGGGCCAGCAAGATCATCAGGACTTAGCACTGACATCAGATGAGCTCTTAAAGCAAACCTAG

Translation (1794 aa):
MKRSRCRERPQPPPARREDAAPRTAELPQPQSLPPRRRAPPGRQLLEERSGPLGHDSREQDMVTGLSPLL
FRKLSNPDIFAPTGKVKLQRQLSQDDCKLRRGSLASSLSGKQLLPLSSSVHSSVGQVTWQSTGEASNLVR
MRNQSLGQSAPSLTAGLKELSLPRRGSFCRTSNRKSLIVTSSTSPTLPRPHSPLHGHTGNSPLDSPRNFS
PNAPAHFSFVPARRTDGRRWSLASLPSSGYGTNTPSSTVSSSCSSQEKLHQLPFQPTADELHFLTKHFST
ENVPDEEGRRSPAMRPRSRSLSPGRSPVSFDSEIIMMNHVYKERFPKATAQMEERLADFISSNTPDSVLP
LADGALSFIHHQVIEMARDCLDKSRSGLITSHYFYELQENLEKLLQDAHERSESSDVAFVIQLVKKLMII
IARPARLLECLEFDPEEFYHLLEAAEGHAKEGHGIKCDIPRYIVSQLGLTRDPLEEMAQLSSYDSPDTPE
TDDSVEGRGVSQPSQKTPSEEDFETIKLISNGAYGAVFLVRHKSTRQRFAMKKINKQNLILRNQIQQAFV
ERDILTFAENPFVVSMFCSFETKRHLCMVMEYVEGGDCATLLKNIGALPVDMVRLYFAETVLALEYLHNY
GIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHIEKDAREFLDKQVCGTPEYIAPEVILR
QGYGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDEIVWPEGDDALPPDAQDLTSKLLHQNPLE
RLGTSSAYEVKQHPFFMGLDWTGLLRQKAEFIPQLESEDDTSYFDTRSERYHHVDSEDEEEVSEDGCLEI
RQFSSCSPRFSKVYSSMERLSLLEERRTPPPTKRSLSEEKEDHSDGLAGLKGRDRSWVIGSPEILRKRLS
VSESSHTESDSSPPMTVRHRCSGLPDGPHCPEETSSTPRKQQQEGIWVLIPPSGEGSSRPVPERPLERQL
KLDEEPPGQSSRCCPALETRGRGTPQLAEEATAKAISDLAVRRARHRLLSGDSIEKRTTRPVNKVIKSAS
ATALSLLIPSEHHACSPLASPMSPHSQSSNPSSRDSSPSRDFLPALGSLRPPIIIHRAGKKYGFTLRAIR
VYMGDTDVYTVHHMVWHVEDGGPASEAGLRQGDLITHVNGEPVHGLVHTEVVELVLKSGNKVSISTTPLE
NTSIKVGPARKGSYKAKMARRSKRSKGKDGQESRKRSSLFRKITKQASLLHTSRSLSSLNRSLSSGESGP
GSPTHSHSLSPRSPPQGYRVAPDAVHSVGGNSSQSSSPSSSVPSSPAGSGHTRPSSLHGLAPKLQRQYRS
PRRKSAGSIPLSPLAHTPSPPATAASPQRSPSPLSGHGSQSFPTKLHLSPPLGRQLSRPKSAEPPRSPLL
KRVQSAEKLAAALAAAEKKLAPSRKHSLDLPHGELKKELTPREASPLEVVGTRSVLSGKGPLPGKGVLQP
APSRALGTLRQDRAERRESLQKQEAIREVDSSEDDTDEEPENSQATQEPRLSPHPEASHNLLPKGSGEGT
EEDTFLHRDLKKQGPVLSGLVTGATLGSPRVDVPGLSPRKLSRPQAFEEATNPLQVPSLSRSGPTSPTPS
EGCWKAQHLHTQALTALCPSFSELTPTGCSAATSTSGKPGTWSWKFLIEGPDRASTNKTITRKGEPANSQ
DTNTTVPNLLKNLSPEEEKPQPPSVPGLTHPLLEVPSQNWPWESECEQMEKEEPSLSITEVPDSSGDRRQ
DIPCRAHPLSPETRPSLLWKSQELGGQQDHQDLALTSDELLKQT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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