NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq

Report for CCDS26749.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26749.1 Public Mus musculus 13 Cenpk 23 108 98 CCDS HistoryNCBI Gene:60411Re-query CCDS DB by CCDS ID:26749.1Re-query CCDS DB by GeneID:60411See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26749.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022227.7 ENSMUSP00000022227.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022227.7Link to Ensembl Protein Viewer:ENSMUSP00000022227.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000022227Re-query CCDS DB by Protein ID:ENSMUSP00000022227
Original member Current member NCBI NM_021790.2 NP_068562.1 Accepted alive Link to Nucleotide Sequence:NM_021790.2Link to Protein Sequence:NP_068562.1Re-query CCDS DB by Nucleotide ID:NM_021790Re-query CCDS DB by Protein ID:NP_068562Link to BLAST:NP_068562.1

Chromosomal Locations for CCDS 26749.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 104229586 104229656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104230729 104230879 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104232658 104232714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104234147 104234219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104236179 104236225 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104242189 104242271 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104242355 104242453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104242746 104242872 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104245278 104245331 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 104249361 104249519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (921 nt):
ATGCTACCGTGTTCTGTCTATTCCAACAACAAAGCTGCATCCTGTACCACTTCTCCGTTGGTAATTTACA
GTAGTTGCAGTAAGGTGAAGAAAACTATAAAGGATATGTCAGAGAATAAACAAGAAGTACATCCAGATAC
TATTACAGATGTGGAAGCTGTTATAGATACAGAGGAAGAACTTATTAAAGAATGTGAAGAAATGTGGAAA
GACATGGAAGATTGTCAGAATAAATTATCACTTATTGGAACTGAGACACTCACGAATGCAGATGCTCAGC
TCTCATTACTTATTATGCAAATGAAATGTTTGACTGCTGAACTTGGTCAATGGAAGAAAAGAAAACCCGA
AATAATTCCCCTAAATGAAGACGTTTTGTTAACATTAGGAAAAGAAGAGTTCCAAAAATTGAGATGTGAT
CTTGAAATGGTACTATCTACCATTCAATCAAAGAATGAAAAGTTAAAAGAAGACTTAGAAAGGGAGCAAC
AGTGGTTGGATGAACAGCAGCAAATACTGGACACTCTTAACGTATTAAACAGTGATGTGGAAAATCAGGT
GGTAACATTAACTGAGTCAAGAATCTTTAATGAACTGACAACTAAGATCCGTGGGATAAAGGAATTCAAG
GAGAAGCTCTTGCTTACCTTGGGTGCTTTTTTAGACAATCATTTTCCTCTGCCTGAAGCAAGTACTCCAA
AGAAAAGGAAAAACATTCAAGACTCGAATGCACAGCTGATAACACTGAATGAAATATTAGAGATGCTTAT
AAATAGAATGTTTGATGTTCCACATGATCCATATGTTAAAATTCGTGATTCCTTTTGGCCACCATATATT
GAGCTACTTCTGCGTTACGGAATTGCTTTGAGACATCCAGAAGATCCATCCCAAATAAGGTTAGAAGCTT
TCCATCAGTAA

Translation (306 aa):
MLPCSVYSNNKAASCTTSPLVIYSSCSKVKKTIKDMSENKQEVHPDTITDVEAVIDTEEELIKECEEMWK
DMEDCQNKLSLIGTETLTNADAQLSLLIMQMKCLTAELGQWKKRKPEIIPLNEDVLLTLGKEEFQKLRCD
LEMVLSTIQSKNEKLKEDLEREQQWLDEQQQILDTLNVLNSDVENQVVTLTESRIFNELTTKIRGIKEFK
EKLLLTLGAFLDNHFPLPEASTPKKRKNIQDSNAQLITLNEILEMLINRMFDVPHDPYVKIRDSFWPPYI
ELLLRYGIALRHPEDPSQIRLEAFHQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH