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Report for CCDS28583.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28583.1 Public Mus musculus 17 Mapk14 23 108 98 CCDS HistoryNCBI Gene:26416Re-query CCDS DB by CCDS ID:28583.1Re-query CCDS DB by GeneID:26416See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28583.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000062694.15 ENSMUSP00000061958.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000062694.15Link to Ensembl Protein Viewer:ENSMUSP00000061958.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000062694Re-query CCDS DB by Protein ID:ENSMUSP00000061958
Original member Current member NCBI NM_011951.3 NP_036081.1 Accepted alive Link to Nucleotide Sequence:NM_011951.3Link to Protein Sequence:NP_036081.1Re-query CCDS DB by Nucleotide ID:NM_011951Re-query CCDS DB by Protein ID:NP_036081Link to BLAST:NP_036081.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_036081.1 360 P47811-1 360 100% 0 0

Chromosomal Locations for CCDS 28583.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 28691740 28691855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28713774 28713903 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28715383 28715441 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28724744 28724855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28725493 28725522 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28725797 28725844 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28728357 28728471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28728904 28728975 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28737011 28737090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28741788 28741866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28744983 28745156 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 28746271 28746338 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1083 nt):
ATGTCGCAGGAGAGGCCCACGTTCTACCGGCAGGAGCTGAACAAGACCATCTGGGAGGTGCCCGAACGAT
ACCAGAACCTGTCCCCGGTGGGCTCGGGCGCCTATGGCTCGGTGTGTGCTGCTTTTGATACAAAGACGGG
GCATCGTGTGGCAGTTAAGAAGCTGTCGAGACCGTTTCAGTCCATCATTCACGCCAAAAGGACCTACCGA
GAGTTGCGTCTGCTGAAGCACATGAAACACGAAAATGTGATTGGTCTGTTGGATGTGTTCACACCCGCAA
GGTCACTGGAGGAATTCAATGACGTGTACCTGGTGACCCATCTCATGGGGGCGGACCTGAACAACATCGT
GAAGTGCCAGAAGCTGACCGACGACCACGTTCAGTTTCTCATCTACCAGATCCTCCGAGGGCTGAAGTAT
ATACATTCGGCTGACATAATTCACAGGGACCTAAAGCCCAGCAACCTAGCTGTGAACGAAGACTGTGAGC
TCAAGATTCTGGATTTTGGGCTGGCTCGGCACACTGATGATGAGATGACAGGCTACGTGGCTACCAGGTG
GTACCGAGCCCCAGAGATCATGCTGAATTGGATGCACTATAACCAGACAGTGGATATTTGGTCCGTGGGC
TGCATCATGGCTGAGCTGTTGACCGGAAGAACGTTGTTTCCTGGTACAGACCATATTGATCAGTTGAAGC
TCATTTTAAGACTCGTTGGAACCCCAGGGGCTGAGCTTCTGAAGAAAATCTCCTCAGAGTCTGCAAGAAA
CTACATTCAGTCTCTGGCCCAGATGCCGAAGATGAACTTCGCAAATGTATTTATTGGTGCCAATCCCCTG
GCTGTCGACCTACTGGAGAAGATGCTCGTTTTGGACTCAGATAAGAGGATCACAGCAGCCCAAGCTCTTG
CGCATGCCTACTTTGCTCAGTACCACGACCCTGATGATGAGCCTGTTGCTGACCCTTATGACCAGTCCTT
TGAAAGCAGGGACCTTCTCATAGATGAGTGGAAGAGCCTGACCTATGATGAAGTCATCAGCTTTGTGCCA
CCACCCCTTGACCAAGAAGAAATGGAGTCCTGA

Translation (360 aa):
MSQERPTFYRQELNKTIWEVPERYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYR
ELRLLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKY
IHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVG
CIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAELLKKISSESARNYIQSLAQMPKMNFANVFIGANPL
AVDLLEKMLVLDSDKRITAAQALAHAYFAQYHDPDDEPVADPYDQSFESRDLLIDEWKSLTYDEVISFVP
PPLDQEEMES


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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