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Report for CCDS36674.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36674.1 Public Mus musculus 13 Rgs14 23 108 98 CCDS HistoryNCBI Gene:51791Re-query CCDS DB by CCDS ID:36674.1Re-query CCDS DB by GeneID:51791See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36674.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000063771.13 ENSMUSP00000068731.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000063771.13Link to Ensembl Protein Viewer:ENSMUSP00000068731.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000063771Re-query CCDS DB by Protein ID:ENSMUSP00000068731
Original member Current member NCBI NM_016758.3 NP_058038.2 Accepted alive Link to Nucleotide Sequence:NM_016758.3Link to Protein Sequence:NP_058038.2Re-query CCDS DB by Nucleotide ID:NM_016758Re-query CCDS DB by Protein ID:NP_058038Link to BLAST:NP_058038.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_058038.2 547 P97492 547 100% 0 0

Chromosomal Locations for CCDS 36674.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 55369892 55369936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55378007 55378028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55378220 55378398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55378702 55378794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55378876 55379019 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55379303 55379446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55379580 55379691 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55380005 55380117 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55380900 55381103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55382845 55382921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55383118 55383244 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55383335 55383416 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55383525 55383571 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55383654 55383768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 55383996 55384135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1644 nt):
ATGCCAGGGAAGCCCAAGCACTTGGGTGTCCCCAACGGGCGCATGGTTCTGGCTGTCTCAGATGGAGAAC
TGACCAGCACTGCAGGTTCCCAGGCCCAGGGTGAGGGCAGAGGCAGCTCTCTCAGCATCCACAGCCTCCC
TAGTGGCCCCAGCAGCCCCTTCTCCACCGAGGAGCAGCCTGTGGCCAGCTGGGCCCAGTCCTTTGAGCGG
CTGCTGCAAGACCCACGGGGTCTGGCTTACTTCACTGAGTTCCTGAAGAAGGAATTCAGCGCAGAGAACG
TAACTTTCTGGAAAGCCTGCGAACGTTTCCAGCAGATCCCAGCCAGCGACACCAAGCAGCTAGCTCAGGA
GGCCCACAACATCTACCACGAGTTCCTATCCAGCCAGGCGCTGAGCCCAGTGAACATCGACCGACAGGCC
TGGCTTAGTGAGGAGGTGCTGGCCCAGCCCCGGCCAGATATGTTCCGAGCACAGCAGCTTCAGATCTTCA
ATTTGATGAAGTTCGACAGCTATGCGCGCTTCGTCAAATCCCCGCTGTACCAAGAGTGCCTGCTGGCGGA
GGCCGAGGGACGCCCCCTGCGGGAACCTGGCTCCTCACACCTCGGGAGCCCGGACACAGCGAGGAAGAAG
CCAAAGCTGAAGCCTGGGAAGTCACTGCCGCTGGGCGTGGAAGAGTTGGGGCAGCTGCCACTCGCTGAGG
GCCCTTGTGGCCGCCCTCTCCGCAAGTCCTTTCGTAGAGAGATGACAGGTGGAGCCATGAATTCGGCCCT
GCGACGAGAGTCTCAAGGGTCCCTGAATTCTTCTGCCAGTCTGGACCTGGGTTTCCTTGCCTTTGTGAGC
AGCAAATCTGAGAGTCACCGGAAGAGCCTTGGAAGTGGAGAGAGTGAGAGCGAGAGTCGGCCGGGGAAGT
ATTGCTGCGTGTATCTACCTGACGGCACGGCTTCCTTGGCCCTGGCTCGACCTGGCCTCACCATCCGAGA
CATGCTGGCAGGCATCTGTGAGAAGAGAGGCCTCTCTCTGCCTGACATTAAGGTCTACCTGGTGGGCAAT
GAACAGAAGGCCCTGGTCCTGGATCAGGATTGCACCGTGCTGGCAGACCAGGAAGTGCGACTGGAAAACA
GGATCACCTTCCAGCTGGAGTTGGTCGGCCTGGAGCGAGTGGTCCGGATCTCAGCTAAGCCCACCAAGCG
TCTGCAAGAGGCGCTGCAGCCCATCCTGGCTAAGCATGGCCTGAGCCTGGACCAGGTGGTACTGCACAGG
CCAGGAGAGAAGCAGCCCATGGATTTGGAGAATCCAGTGAGCTCAGTGGCCTCACAGACACTGGTTTTGG
ACACTCCTCCGGATGCAAAGATGAGTGAAGCCAGAAGCATATCCCCCTGCCGCAGTCAGGGATGCCTCCC
AAGAACCCAGACCAAGGACAGTCACCTTCCCCCATCGTCCTCCAGTTTGCTGGTAGAAGATGCCAGTAGT
TCTACTGGGAACCGGCAGACCTGTGACATTGAAGGCCTGGTGGAGCTGCTGAATCGGGTGCAGAGCAGCG
GGGCCCACGATCAGAGAGGACTTCTTCGCAAAGAGGACCTGGTCCTTCCAGAATTTCTGCAGCTTCCTTC
CCAAAGACCAGGCTCTCGGGAGGCTCCACCATAG

Translation (547 aa):
MPGKPKHLGVPNGRMVLAVSDGELTSTAGSQAQGEGRGSSLSIHSLPSGPSSPFSTEEQPVASWAQSFER
LLQDPRGLAYFTEFLKKEFSAENVTFWKACERFQQIPASDTKQLAQEAHNIYHEFLSSQALSPVNIDRQA
WLSEEVLAQPRPDMFRAQQLQIFNLMKFDSYARFVKSPLYQECLLAEAEGRPLREPGSSHLGSPDTARKK
PKLKPGKSLPLGVEELGQLPLAEGPCGRPLRKSFRREMTGGAMNSALRRESQGSLNSSASLDLGFLAFVS
SKSESHRKSLGSGESESESRPGKYCCVYLPDGTASLALARPGLTIRDMLAGICEKRGLSLPDIKVYLVGN
EQKALVLDQDCTVLADQEVRLENRITFQLELVGLERVVRISAKPTKRLQEALQPILAKHGLSLDQVVLHR
PGEKQPMDLENPVSSVASQTLVLDTPPDAKMSEARSISPCRSQGCLPRTQTKDSHLPPSSSSLLVEDASS
STGNRQTCDIEGLVELLNRVQSSGAHDQRGLLRKEDLVLPEFLQLPSQRPGSREAPP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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