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Report for CCDS28463.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
28463.1 Public Mus musculus 17 Flywch1 23 108 98 CCDS HistoryNCBI Gene:224613Re-query CCDS DB by CCDS ID:28463.1Re-query CCDS DB by GeneID:224613See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 28463.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000045517.9 ENSMUSP00000040022.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000045517.9Link to Ensembl Protein Viewer:ENSMUSP00000040022.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000045517Re-query CCDS DB by Protein ID:ENSMUSP00000040022
Original member Current member EBI ENSMUST00000086325.12 ENSMUSP00000083505.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000086325.12Link to Ensembl Protein Viewer:ENSMUSP00000083505.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000086325Re-query CCDS DB by Protein ID:ENSMUSP00000083505
Original member Current member NCBI NM_153791.2 NP_722486.2 Accepted alive Link to Nucleotide Sequence:NM_153791.2Link to Protein Sequence:NP_722486.2Re-query CCDS DB by Nucleotide ID:NM_153791Re-query CCDS DB by Protein ID:NP_722486Link to BLAST:NP_722486.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_722486.2 673 Q8CI03-1 673 100% 0 0

Chromosomal Locations for CCDS 28463.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 23755643 23755944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23756547 23756810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23760204 23760467 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23760607 23761116 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23762166 23762594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 23762976 23763228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2022 nt):
ATGCCCCTGCCTGAGCCCAGTGAGCAGGACTGTGAGAGCCTGAGAGCTGGCCAGGAGCCATCTGTTGGAG
CCAGGAAGCCTCAAGAGTCCTCCAATCTGGTCCCGGCCAGGGATAAAGAGAGACCCAAGCCGACAGATGT
CGCGTCCCAGGAGACGTCTAGCACTGCAACCCTACCGAACAATACTCTCCAGGTTGCACCAGTCAAGAAG
CAAGGACGGATAATTCACCGGAAACGTAGTAGGGTAGATGCAGTTCCTCCCCAGCCTCTGGAGTTCCTGA
AGACCCCATTTGGGGGCCGCCTTCTGGTGCACAAGTCATTCCTGTACAAGCAAGAGAAGGCTGTGGGGGA
CAAGGTGTACTGGAAATGCCGCCAGCACTCAGAGCTAAGCTGCCGGGGACGGGCCATCACCCGTGGCTTT
CGAGTCACAGAGATGCGGGACCACTGTCACCCACCTGAGAAGGAGGGCCTGGACAGGAAAAAGCGCCACA
GGGGAAGGCCGCCCAGCTCAGCCCTGCCTGAGGGCGCTGAAGTCCAAGAAGATGAAGTGAGCCTATGGTT
GTACCCTGTGGAGCCAGAACCTACTCCTCAGCCAAGCATTGAAACCCCAGAGGAGGAGCAGGGGTACCGG
TCCCTGGCACTGCAGAGCCTGCCTCCCAAGAAACGCCCTACACCAGGAGTGGTACGGTATCGGCCTCTTG
AGTTCCTGAAGACTTGCTATGGGGGTACCTTCCTGGTTCACCAGTCCTTCCTCTACAAGCGGGAAAAGAC
GGTAGGAGGCAAGGTGTACTGGACCTGCCGGGAACATGCAGTCCATGGCTGCCGTAGCCGAGCCATCACC
CAGGGCCAGCGTGTGACAGTGATGCGCAGCCATTGCCACTCACCTGACATAGAAGGCTTGCAGGCCCGGC
GACAGCAGGAGAAGACCATAAAGAAGATACAGGCAAGGCGAATTGGGGCTGGGGACTTGGAGGATTGCGA
TGACATAGAGGACTCACTGCTGCAAGGAGTGGACAGCCTGTTCTACCGAAGAGGGCAGGGCACACTGACT
CTCAGTAGGTCCAAGTCCAAGTCCAAGTCCAAATCCAGGTCCAAGTCCAAGTCCAAGTCCAGGTCCAGGT
CTAGAAAACGAGCAAAGAAGCAGCAGGAATCCTCGCAGGAGCCCCCCGAGGAGGACCAGGATGTAGACCC
CAGAGGCCCAGAGTTCCTAAAAACCCCTCTAGGGGGCAACTTCCTGGTGTATGAGTCCTTCCTCTACAGA
CGGGAGAAAGTGGCTGGTGAGAAGGTGTACTGGACCTGCCGGGACCAGGCACGCATGGGTTGTCGCAGCC
GCGCCATCACTCAGGGCAGGCAGGTGACTGTGATGCGAAGCCACTGTCATCCACCAGACCTGTTAGGATT
GGAGACTCTGAGGCAGCGGGAGAAACGCCCAGGCCCCTCTCAGTGGGATGGCCCAGAAGGGCCTGAGTTC
CTAAAGACCCCTCTAGGAGGCAGCTTCCTGGTATATGAGTCCTTCCTCTACAGACGGGAAAAAGCAACTG
GTGATAAGGTGTACTGGACCTGCCGGGACCAGGCACGCATGGGCTGTCGCAGCCGAGCTATCACACAGGG
CCAGCGGGTGATGGTCATGCGCAGGCACTGCCACCCACCGGACATGGGTGGCCTGGAAGCCCTTCGGCAG
AGGGAGAACTTCCCTAACCTGACCCACTGGGAAGGCCCAGAGCCCCTGCAGCCACTGGAGTTCCTGCGGA
CATCCCTTGGAGGCCGCTTCCTGGTGTATGAGTCCTTCCTGTACAGGAAGGAGAAGGCTGCTGGTGAGAA
AGTGTACTGGATGTGTCGAGACCAGGCTCGGCTGGGCTGCCGCAGCCGAGCCATCACCCAGGGCCGGCGG
GTCATGGTGATGCGGAGCCACTGCCACCCACCTGACCTGGCTGGCCTGGAGGCCCTGCGGCAGCGGGAGA
AGGCCCCCAGTGCAGCCAAGAAGAAAAAGAAGAAGAAGAAGAAGAAGAAAGGTATACACTGA

Translation (673 aa):
MPLPEPSEQDCESLRAGQEPSVGARKPQESSNLVPARDKERPKPTDVASQETSSTATLPNNTLQVAPVKK
QGRIIHRKRSRVDAVPPQPLEFLKTPFGGRLLVHKSFLYKQEKAVGDKVYWKCRQHSELSCRGRAITRGF
RVTEMRDHCHPPEKEGLDRKKRHRGRPPSSALPEGAEVQEDEVSLWLYPVEPEPTPQPSIETPEEEQGYR
SLALQSLPPKKRPTPGVVRYRPLEFLKTCYGGTFLVHQSFLYKREKTVGGKVYWTCREHAVHGCRSRAIT
QGQRVTVMRSHCHSPDIEGLQARRQQEKTIKKIQARRIGAGDLEDCDDIEDSLLQGVDSLFYRRGQGTLT
LSRSKSKSKSKSRSKSKSKSRSRSRKRAKKQQESSQEPPEEDQDVDPRGPEFLKTPLGGNFLVYESFLYR
REKVAGEKVYWTCRDQARMGCRSRAITQGRQVTVMRSHCHPPDLLGLETLRQREKRPGPSQWDGPEGPEF
LKTPLGGSFLVYESFLYRREKATGDKVYWTCRDQARMGCRSRAITQGQRVMVMRRHCHPPDMGGLEALRQ
RENFPNLTHWEGPEPLQPLEFLRTSLGGRFLVYESFLYRKEKAAGEKVYWMCRDQARLGCRSRAITQGRR
VMVMRSHCHPPDLAGLEALRQREKAPSAAKKKKKKKKKKKGIH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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