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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS17260.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
17260.1 |
Public |
Mus musculus |
3 |
Hps3 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 17260.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000012580.12 |
ENSMUSP00000012580.6 |
Accepted |
alive |
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NCBI |
NM_080634.4 |
NP_542365.3 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_542365.3 |
1002 |
Q91VB4 |
1002 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 17260.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (3009 nt): ATGGTGCGTCTGTACAACCTGCACCCGTTTGGGTCGCAGCAGGTAGTCCCCTGCCAGTGGGAGCCGGAGC AGGTCTGCTGCGGCGGGAGCGACGCGCTGTTCGTGGCTGCCGGCTGCAAGGTGGAGGCGTTCGCTGTTCA GGGCGAAGAGCTGTGCCGGCAGCGCTGCGCCTTCTCCACGCTAGGCAGGGTGCTGCGCATGGCCTACAGC GAAGCCGGAGACTATCTGGTAGCAATTGAGGAGAAAAACAAAACTATATTCCTGCGTGCTTACGTGAATT GGAGGAGTAAGAGGAGCGACAACTCCCGTGTGTGCATTCGAATGGTTGGCCACAATGTGGAGGCATCCTT CTGTGAAAGCTTTAGAGACCAGATGTCTATAATTGAGATGCCAATGTCTGAGGCCCCTTTGTGCTTTTCG TGTTGTCCTGTGAAAGGAGATCTTCTTGTTGGATGTACAAATAAGTTAGTGTTATTTACTTTGAAGTATG ATATCATTAATGAGGAATTCTCAATATTGAACTTTGAACGTTCATTAATTATACACATAGATAATATCAC TCCTGTTGAAATCTCTTTTTGTGTTGGATATGTTGCTGTCATGTCTGATTTAGAAGTCTTACTCCTAAAA CTGGAGTCAGACCCTATACATGGAGAGAGTGTTGACCACCACCCACAAGAAACCAGCAATCCATTGAAAG AGGCGGAAGGTGTCAGTAATGAAACTTCACAACTTGAGTCAGAAGATTTTGTTATCTGTCTAAAACCCAT GGAACTCATTGGTGAAAAATGTGAACAGTCTGGGATATCTGTTAAACTGGAGTCCACAGGATTAGAAGAT GAAAAAGTAAAATATTTACGTGTTCGGCATCTATTGTATAGACGTTTTGCTCCAGATATTTCGTCCTATG TCTTGTCTGATAACATCAAGTTACATTCCCTTCAGCTGCTACCCATTCACCAAAGTGGTTTTCATCCTGA TGAAAATGATTTATCGCCGAAAAAAGAGATGCCAAATCTCTTCTGTTTCTTCTCGTTACCTCATGTGGGC TATCTGTACATGGTTGTGAAGTCTGTTGAATTAATGTCAGTCTATTGGTATCCTGAGAAGTCTCAACAAG CCGTGCTCACACCACAGTTCTTGCATGTCATCACAAGCCAAAGCCTGCAGTGTTTCACGGTGCGATGCAG TGCAGCGGTGGCACATGAGGAAGACCTATACATGGATACTACGCTAAAGGCTTGCCCACCTGTCAGTATG GACGTTTGTGCTCTAAGGATACAGCTTTTCATAGGCTTGAAAGCCATCTGTCACTTTAAAAACCACATTA TACTTCTGACGAAGGCAGAGCCTGAGGCCATTCCAGAGAGAAGAGAGTCACCCAAGAAACTTATTTCTAG AAAAGATGCCAGTGTTAGGAGCGGAACCCCTCACGTGGCTGAAGCGGCATGGAATCTGTATCTCGTGAAC ACCACGGCACCAGTGCAGCTGTACAAAGAAATGGTAGACTATAGTAACAGCTACAAGACCGTGAAAACCG AGAGCTGTCTCCACCTGCTCAGTGAGGCTCATCTGCTAGTGAGAGCTGCCCTGATGGATGGCAGTCAGCT GGAGCCTGCAGAGAAAGCAGAACTCCTGGAAGCTTTTAAAGAAAGCTGTGGACACCTTGGAGACTGTTAC AGCAGGCTTACCACTGAGCAATCCCATCTCGCCTTGCCGTACTATAAGATGTCTGGTTTGTCTCTGGCTG AAGTCTTGGCCCGTGTGGACTGGACAGAAGAGAGTGAATCACAGAAATATGAGAGAGGACTAGTATTTTA TATTAATCATTCTCTTTATGAAAACCTGGATGAAGAATTAAGTAAAGAATTAGCAGCAAAAGTGGCTCAG ATATTCCACATGGCTGAGCCGAAGCAGCTGCCTCATGTTCTCTCTAGCCCTTCTATGAAGAATATTGATC CCTTAACTGCCTTGCATTATTTAAGGAAGCTGGATAGTTGTGGAGTTTCACCCGTCTTAGTGACCTTGAC CAAGGCTGCAGTGGCCTTGAAAATGGGAGATCTTGACATGTACAGAAATGAGATGAAAAGCCATTCGGAG ATGAAGCTGGTGTATGGCTTCATTCTGGAACCCCGGCTGTTAATTCAACAGTGGAAAGGACAGATTGTTC CTACAGAACTTGCGATTGACTTGAAGGAAACTCAGCCTGGATTGCTTGTGGCTTCAGTCCTGGGCTTACA GAAGAATGATAAAATTGGAATTGTAGAAACAGATTCTTTCTTTAAGGTGCTGTGTGGAAAGGATGAAGAC GCAGTTCCGCAGCTTTTGATAGACTTCTGGGAAGCTCAGCTCGTAGCTTGTCTCCCAAATGTGGTACTTG AGGAACTCTTTTTCAAGCTCATCTCTCAGTACGTTTGGAGGTTATCTGAGAGGCGGTGTCCTGACACCGT ACCACTGAGAACAGCGGAGGATTTGATAAATGCCTGCAGTCATTATGGCCTAGTAAATCCATGGGTTCAT GTGTTAACGACATCTGATTCCTTAGCTGATAAAAATTACACAGACGACCTTCTGAAATTACAGTCTCTCA TCTGTAGCCCTTCATTGGACGTAGCCTCCATTATTCCGTTTTTGGAGCCACTCTCAGAAGACACTGTTGC CGGCCTCAGTACTCATGCTCTCTGCCATACACGCTTACAAGAGTATGAACAGTGCATAGACACGTTGCTA GAGAGATGCCCAGAGGCCGTCATTGCGTATGCTAATCAGGAACTGAAGGAAGATCACTGGATTCTGTGGT GGAAAAAGCTGCTGCCTGAGCTCTGCCAGAGAGTCAAGAGTGGTGGCGAGAGGTCCCACCTTCACCTGTC ATTGTTAAAAGAAACCTTGTCGGTTATTGCTGTGGGACTGGACCTGAGGGATTTCTTGAATGTTCTCCCA GAAGATGGGGCAGCAGCATTTTTCCTGCCCTACCTCCTTTTCTGCAGCCGGAAGAAATCACTAACTTGA
Translation (1002 aa): MVRLYNLHPFGSQQVVPCQWEPEQVCCGGSDALFVAAGCKVEAFAVQGEELCRQRCAFSTLGRVLRMAYS EAGDYLVAIEEKNKTIFLRAYVNWRSKRSDNSRVCIRMVGHNVEASFCESFRDQMSIIEMPMSEAPLCFS CCPVKGDLLVGCTNKLVLFTLKYDIINEEFSILNFERSLIIHIDNITPVEISFCVGYVAVMSDLEVLLLK LESDPIHGESVDHHPQETSNPLKEAEGVSNETSQLESEDFVICLKPMELIGEKCEQSGISVKLESTGLED EKVKYLRVRHLLYRRFAPDISSYVLSDNIKLHSLQLLPIHQSGFHPDENDLSPKKEMPNLFCFFSLPHVG YLYMVVKSVELMSVYWYPEKSQQAVLTPQFLHVITSQSLQCFTVRCSAAVAHEEDLYMDTTLKACPPVSM DVCALRIQLFIGLKAICHFKNHIILLTKAEPEAIPERRESPKKLISRKDASVRSGTPHVAEAAWNLYLVN TTAPVQLYKEMVDYSNSYKTVKTESCLHLLSEAHLLVRAALMDGSQLEPAEKAELLEAFKESCGHLGDCY SRLTTEQSHLALPYYKMSGLSLAEVLARVDWTEESESQKYERGLVFYINHSLYENLDEELSKELAAKVAQ IFHMAEPKQLPHVLSSPSMKNIDPLTALHYLRKLDSCGVSPVLVTLTKAAVALKMGDLDMYRNEMKSHSE MKLVYGFILEPRLLIQQWKGQIVPTELAIDLKETQPGLLVASVLGLQKNDKIGIVETDSFFKVLCGKDED AVPQLLIDFWEAQLVACLPNVVLEELFFKLISQYVWRLSERRCPDTVPLRTAEDLINACSHYGLVNPWVH VLTTSDSLADKNYTDDLLKLQSLICSPSLDVASIIPFLEPLSEDTVAGLSTHALCHTRLQEYEQCIDTLL ERCPEAVIAYANQELKEDHWILWWKKLLPELCQRVKSGGERSHLHLSLLKETLSVIAVGLDLRDFLNVLP EDGAAAFFLPYLLFCSRKKSLT
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