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Report for CCDS26899.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26899.1 Public Mus musculus 14 Stimate 23 108 98 CCDS HistoryNCBI Gene:69179Re-query CCDS DB by CCDS ID:26899.1Re-query CCDS DB by GeneID:69179See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26899.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000006701.7 ENSMUSP00000006701.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000006701.7Link to Ensembl Protein Viewer:ENSMUSP00000006701.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000006701Re-query CCDS DB by Protein ID:ENSMUSP00000006701
Original member Current member NCBI NM_028839.4 NP_083115.3 Accepted alive Link to Nucleotide Sequence:NM_028839.4Link to Protein Sequence:NP_083115.3Re-query CCDS DB by Nucleotide ID:NM_028839Re-query CCDS DB by Protein ID:NP_083115Link to BLAST:NP_083115.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_083115.3 288 Q3UF25 288 100% 0 0

Chromosomal Locations for CCDS 26899.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 30825731 30825890 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30862880 30862928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30864429 30864524 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30866623 30866744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30870751 30870863 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30871481 30871558 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30872550 30872699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 30874378 30874476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (867 nt):
ATGCAAGGCCCGGGAGGGAACGTGAGCCGCGGATTGCCGAGCGGGCCGGCCTCCACGGTCGCGTCCGGGG
CGGGCCGCTGTGAGAGCGGCGCGCTCATGCACAGTTTCGGCATCTTCCTGCAGGGGCTGCTCGGCGTCGT
GGCCTTCAGCACATTGATGCTTAAACGCTTCAGAGAACCAAAGCATGAAAGACGGCCGTGGAGGATATGG
TTTTTAGACACTTCCAAACAAGCCATAGGGATGCTCTTCATCCACTTTGCAAATGTGTACCTAGCAGATC
TCACTGAAGAGGACCCTTGTTCACTGTACCTCATCAACTTTCTTCTGGACGCCACTGTAGGCATGCTGCT
CATTTATGTGGGCGTACGCGCCGTCGGTGTCTTGGTGGAGTGGCAGCAGTGGGAATCCCTGCGTTTTGGA
GAATATGGAGACCCTCTGCAGTGCGGGGCCTGGGTAGGACAGTGCGCCCTCTACATCGTGATCATGATCT
TTGAAAAGTCCGTGGTCTTCATCGTCCTCCTCATACTCCAGTGGAAAAAGGTGGCCCTATTGAATCCAAT
TGAAAACCCCGACCTGAAGCTGGCCATCGTCATGCTGATAGTCCCCTTCTTTGTCAATGCTTTCATGTTC
TGGGTAGTGGACAATTTCCTCATGAGAAAGGGGAAGACGAAAGCTAAACTAGAAGAAAGAGGAGCCAACC
AGGACTCAAGGAATGGGAGCAAGGTTCGCTACCGAAGGGCAGCATCCCATGAGGAGTCTGAGTCTGAGAT
CCTGATCTCAGCTGACGACGAGATGGAGGAGTCTGACGCCGAGGAGGACCTCCGGAGACCTGTGAAAAAG
AAGCACCGCTTCGGGCTGCCTGTATGA

Translation (288 aa):
MQGPGGNVSRGLPSGPASTVASGAGRCESGALMHSFGIFLQGLLGVVAFSTLMLKRFREPKHERRPWRIW
FLDTSKQAIGMLFIHFANVYLADLTEEDPCSLYLINFLLDATVGMLLIYVGVRAVGVLVEWQQWESLRFG
EYGDPLQCGAWVGQCALYIVIMIFEKSVVFIVLLILQWKKVALLNPIENPDLKLAIVMLIVPFFVNAFMF
WVVDNFLMRKGKTKAKLEERGANQDSRNGSKVRYRRAASHEESESEILISADDEMEESDAEEDLRRPVKK
KHRFGLPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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