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Report for CCDS65726.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
65726.1 Public Homo sapiens 1 SUCO 24 110 108 CCDS HistoryNCBI Gene:51430Re-query CCDS DB by CCDS ID:65726.1Re-query CCDS DB by GeneID:51430See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 15, NCBI annotation release 105, Ensembl annotation release 74

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 65726.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367723.8 ENSP00000356696.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367723.8Link to Ensembl Protein Viewer:ENSP00000356696.4Re-query CCDS DB by Nucleotide ID:ENST00000367723Re-query CCDS DB by Protein ID:ENSP00000356696
Original member Current member NCBI NM_016227.4 NP_057311.3 Accepted alive Link to Nucleotide Sequence:NM_016227.4Link to Protein Sequence:NP_057311.3Re-query CCDS DB by Nucleotide ID:NM_016227Re-query CCDS DB by Protein ID:NP_057311Link to BLAST:NP_057311.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057311.3 1405 Q9UBS9-2 1405 100% 0 0

Chromosomal Locations for CCDS 65726.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 172532473 172532798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172533177 172533497 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172551512 172551626 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172555869 172556023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172557280 172557417 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172557644 172557794 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172569019 172569142 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172570047 172570171 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172570663 172570730 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172573891 172573998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172575518 172575623 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172577764 172577819 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172578298 172578389 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172579202 172579267 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172585018 172585086 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172585858 172585948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172588760 172589926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172590984 172591071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172600064 172600168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602064 172602218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172602696 172602787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172608747 172608802 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 172609816 172610259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4218 nt):
ATGAGAGGATTCTTGGCACGCCCCTTTCTATCTACCAATCAACATCTAGCTCAATGGGGCAGTCCATTGC
CACAGGGAAAGGGCTTGGTGCAGCTTCCCTCACAACACACACGTCATTCTAGGCCATTCCACGAACTGTG
CTCAAAAGAGGAAAACAGTGCAACAGTTCCAAAGCTGATCAGTCTCGTGGTGAGCAGCGAAACTATAGAC
TTCTCTAACAAAACCATGGATTCTAGGAGGGACTGGGAAAGAGAAAAACGAATTCTGGAAGGCAAACTAC
AACTCCCAAAGGCCCTTGCGCGGACTCAGCGCGCGAGGGACGAAGGGCGGGCGTGGACGAGCCGGTGGCT
GCAGCGGCGGCGGTCCCCGGAGTCCTGTGAAGCGCCCCTGTCCGCGCCTCTGTGGGGCCCTCAGAGAGGG
CTGCCAGGACGCGAGCCACTGAGGAGCCGCTCAGCCAGCGCCATAGCCCTTAGGACTATCGGTCACATTC
TCGCGCTCCTGCTCCGGCTCCTCCATCTTGGCCTCGGCAGTGGCGGCTGCCGGGAGGATGTGCCGCCTTC
TGGCAGGGGGAAGAAGGAGGAGAAGATGAAGAAGCACCGGCGGGCCTTGGCCCTGGTCTCCTGCCTCTTT
CTGTGCTCTCTGGTCTGGCTTCCCAGCTGGCGTGTATGTTGTAAAGAGAGTTCTTCAGCTTCAGCGTCAT
CATATTACTCTCAAGATGACAACTGCGCACTAGAAAATGAAGATGTACAATTCCAGAAAAAGAATACAGA
GTCAAAAAAGTTAAGTCCACCGGTGGTGGAGACACTCCCTACAGTTGATTTGCATGAAGAGTCTTCCAAT
GCAGTTGTGGACAGTGAAACTGTTGAAAATATTTCCAGCTCATCTACCTCAGAAATCACTCCAATCTCAA
AGCTTGATGAAATAGAAAAATCTGGTACTATTCCGATAGCCAAACCAAGTGAAACTGAGCAGTCTGAAAC
TGATTGTGATGTTGGTGAGGCCCTTGATGCTAGTGCTCCAATTGAACAACCTTCCTTTGTCAGTCCACCT
GACAGCCTTGTTGGCCAGCATATAGAAAATGTATCATCTTCACATGGTAAAGGAAAGATAACAAAATCAG
AATTTGAATCAAAAGTTTCAGCAAGTGAACAGGGCGGTGGTGATCCAAAATCTGCATTGAATGCTTCAGA
TAATTTAAAAAATGAGAGCTCTGATTATACAAAACCAGGAGACATTGACCCTACATCAGTAGCAAGTCCC
AAAGATCCAGAAGATATACCAACATTTGATGAATGGAAGAAGAAAGTTATGGAAGTAGAAAAAGAAAAAA
GTCAGTCGATGCATGCATCTTCTAATGGAGGTTCACATGCCACCAAAAAGGTCCAGAAAAATCGAAATAA
TTATGCCTCAGTAGAATGTGGTGCCAAAATTCTAGCAGCTAATCCAGAAGCCAAGAGCACATCTGCTATT
CTTATAGAAAATATGGATCTTTACATGTTGAATCCTTGCAGCACTAAAATTTGGTTTGTTATTGAACTTT
GTGAACCAATTCAAGTAAAACAGCTTGATATTGCAAATTATGAATTATTTTCTTCTACTCCTAAAGATTT
TCTGGTTTCTATCAGTGACAGATATCCAACAAATAAGTGGATTAAGCTGGGTACTTTTCATGGTAGAGAT
GAGCGGAATGTACAGAGTTTCCCTTTAGATGAACAGATGTATGCAAAATATGTCAAGGTTGAGTTGCTAT
CACATTTTGGATCAGAGCACTTTTGTCCATTAAGCCTTATAAGGGTATTTGGCACTAGCATGGTGGAAGA
ATATGAAGAAATTGCTGATTCCCAGTATCACTCAGAACGCCAGGAACTATTTGATGAGGACTATGATTAT
CCACTGGATTATAATACTGGAGAGGATAAATCCTCAAAAAATCTTCTTGGTTCTGCTACAAATGCCATTC
TAAATATGGTGAATATTGCTGCTAATATTCTGGGAGCAAAAACTGAAGACCTGACAGAAGGAAATAAAAG
TATATCTGAGAATGCCACTGCCACAGCTGCACCTAAAATGCCTGAATCAACTCCTGTTTCAACTCCTGTT
CCATCTCCTGAGTATGTAACCACTGAAGTACACACACATGACATGGAGCCGTCAACACCAGATACTCCAA
AAGAGAGTCCCATTGTACAGTTAGTTCAAGAGGAGGAAGAGGAGGCAAGTCCATCTACAGTGACCCTTCT
GGGCAGCGGTGAACAGGAAGATGAATCATCACCCTGGTTTGAGTCAGAGACACAAATATTTTGCAGTGAA
CTGACCACAATTTGTTGTATTTCTAGTTTTTCAGAATACATATATAAATGGTGTTCAGTTAGAGTTGCTC
TTTATCGGCAGCGCAGCCGAACTGCTTTGAGTAAAGGAAAAGATTATCTTGTGTTAGCTCAACCACCCTT
ACTACTTCCTGCGGAATCAGTAGATGTTTCAGTATTGCAACCTCTGAGTGGAGAATTGGAAAATACGAAT
ATAGAAAGGGAAGCTGAAACTGTTGTTCTGGGTGATTTAAGTAGTAGTATGCACCAGGATGACTTGGTGA
ATCACACTGTAGATGCAGTTGAACTTGAACCAAGCCATTCTCAAACTCTTTCTCAGTCTCTTCTTTTAGA
TATTACCCCAGAAATCAATCCCTTGCCTAAAATAGAAGTATCTGAGTCTGTTGAATATGAGGCAGGACAT
ATACCATCACCAGTGATTCCCCAAGAGAGTTCTGTTGAGATCGATAATGAAACAGAACAAAAGTCTGAGA
GCTTTAGTTCTATAGAGAAACCATCTATTACCTATGAAACAAATAAAGTTAATGAGTTAATGGATAATAT
TATAAAAGAAGATGTGAACTCCATGCAAATTTTCACAAAGCTGTCTGAAACAATAGTGCCACCAATAAAT
ACAGCCACTGTACCCGACAATGAAGATGGGGAAGCCAAAATGAATATAGCTGACACAGCAAAGCAAACTT
TGATTTCTGTTGTGGATTCTTCTTCATTACCTGAAGTAAAAGAAGAAGAACAGTCTCCAGAAGATGCCCT
TTTGAGAGGGTTACAGAGGACAGCTACAGATTTTTATGCTGAATTGCAAAATTCTACAGATCTAGGATAT
GCTAATGGAAATCTTGTACATGGATCAAACCAAAAGGAGTCAGTATTTATGAGACTTAATAATCGTATTA
AAGCCTTAGAAGTTAACATGTCTCTCAGTGGTCGCTATCTGGAGGAGCTTAGCCAAAGGTACCGAAAACA
AATGGAAGAAATGCAAAAGGCTTTCAATAAAACAATCGTGAAACTTCAGAATACTTCAAGAATAGCAGAG
GAGCAGGATCAGCGGCAAACTGAAGCCATCCAGTTGCTACAGGCACAGCTGACCAACATGACACAGCTTG
TTTCAAATTTATCAGCAACAGTAGCAGAATTGAAACGGGAGGTTTCAGATCGACAAAGCTATCTTGTCAT
ATCTTTGGTTCTTTGTGTTGTCTTGGGACTGATGCTTTGTATGCAGCGTTGTCGAAATACTTCTCAATTT
GATGGAGATTATATTTCAAAACTTCCTAAAAGTAATCAGTATCCAAGCCCTAAAAGGTGTTTCTCTTCCT
ATGATGATATGAATTTGAAAAGAAGAACTTCATTCCCACTCATGAGATCCAAGTCTCTACAGTTAACTGG
CAAAGAAGTAGACCCAAATGATTTGTACATTGTAGAACCCCTCAAGTTTTCTCCAGAAAAGAAGAAGAAG
CGCTGCAAGTACAAAATTGAAAAAATTGAGACCATAAAGCCTGAAGAACCATTGCACCCCATAGCCAATG
GCGACATAAAAGGAAGAAAGCCCTTTACGAACCAGAGAGATTTTTCTAATATGGGAGAAGTTTATCACTC
TTCTTATAAAGGTCCTCCATCTGAAGGAAGCTCAGAAACTTCATCACAGTCAGAAGAGTCCTATTTTTGT
GGCATTTCAGCTTGCACAAGTCTGTGCAATGGACAGTCTCAAAAGACAAAAACTGAGAAGAGGGCTTTAA
AACGAAGACGATCTAAAGTCCAAGACCAAGGAAAATTGATAAAAACTCTAATACAGACTAAGTCGGGATC
ATTGCCGAGCCTGCATGACATAATCAAAGGAAACAAAGAGATCACCGTGGGAACATTTGGTGTTACAGCA
GTCTCGGGACATATCTAA

Translation (1405 aa):
MRGFLARPFLSTNQHLAQWGSPLPQGKGLVQLPSQHTRHSRPFHELCSKEENSATVPKLISLVVSSETID
FSNKTMDSRRDWEREKRILEGKLQLPKALARTQRARDEGRAWTSRWLQRRRSPESCEAPLSAPLWGPQRG
LPGREPLRSRSASAIALRTIGHILALLLRLLHLGLGSGGCREDVPPSGRGKKEEKMKKHRRALALVSCLF
LCSLVWLPSWRVCCKESSSASASSYYSQDDNCALENEDVQFQKKNTESKKLSPPVVETLPTVDLHEESSN
AVVDSETVENISSSSTSEITPISKLDEIEKSGTIPIAKPSETEQSETDCDVGEALDASAPIEQPSFVSPP
DSLVGQHIENVSSSHGKGKITKSEFESKVSASEQGGGDPKSALNASDNLKNESSDYTKPGDIDPTSVASP
KDPEDIPTFDEWKKKVMEVEKEKSQSMHASSNGGSHATKKVQKNRNNYASVECGAKILAANPEAKSTSAI
LIENMDLYMLNPCSTKIWFVIELCEPIQVKQLDIANYELFSSTPKDFLVSISDRYPTNKWIKLGTFHGRD
ERNVQSFPLDEQMYAKYVKVELLSHFGSEHFCPLSLIRVFGTSMVEEYEEIADSQYHSERQELFDEDYDY
PLDYNTGEDKSSKNLLGSATNAILNMVNIAANILGAKTEDLTEGNKSISENATATAAPKMPESTPVSTPV
PSPEYVTTEVHTHDMEPSTPDTPKESPIVQLVQEEEEEASPSTVTLLGSGEQEDESSPWFESETQIFCSE
LTTICCISSFSEYIYKWCSVRVALYRQRSRTALSKGKDYLVLAQPPLLLPAESVDVSVLQPLSGELENTN
IEREAETVVLGDLSSSMHQDDLVNHTVDAVELEPSHSQTLSQSLLLDITPEINPLPKIEVSESVEYEAGH
IPSPVIPQESSVEIDNETEQKSESFSSIEKPSITYETNKVNELMDNIIKEDVNSMQIFTKLSETIVPPIN
TATVPDNEDGEAKMNIADTAKQTLISVVDSSSLPEVKEEEQSPEDALLRGLQRTATDFYAELQNSTDLGY
ANGNLVHGSNQKESVFMRLNNRIKALEVNMSLSGRYLEELSQRYRKQMEEMQKAFNKTIVKLQNTSRIAE
EQDQRQTEAIQLLQAQLTNMTQLVSNLSATVAELKREVSDRQSYLVISLVLCVVLGLMLCMQRCRNTSQF
DGDYISKLPKSNQYPSPKRCFSSYDDMNLKRRTSFPLMRSKSLQLTGKEVDPNDLYIVEPLKFSPEKKKK
RCKYKIEKIETIKPEEPLHPIANGDIKGRKPFTNQRDFSNMGEVYHSSYKGPPSEGSSETSSQSEESYFC
GISACTSLCNGQSQKTKTEKRALKRRRSKVQDQGKLIKTLIQTKSGSLPSLHDIIKGNKEITVGTFGVTA
VSGHI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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