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Report for CCDS30590.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30590.1 Public Homo sapiens 1 AADACL4 24 110 108 CCDS HistoryNCBI Gene:343066Re-query CCDS DB by CCDS ID:30590.1Re-query CCDS DB by GeneID:343066See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30590.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376221.2 ENSP00000365395.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376221.2Link to Ensembl Protein Viewer:ENSP00000365395.1Re-query CCDS DB by Nucleotide ID:ENST00000376221Re-query CCDS DB by Protein ID:ENSP00000365395
Original member Current member NCBI NM_001013630.2 NP_001013652.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001013630.2Link to Protein Sequence:NP_001013652.1Re-query CCDS DB by Nucleotide ID:NM_001013630Re-query CCDS DB by Protein ID:NP_001013652Link to BLAST:NP_001013652.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001013652.1 407 Q5VUY2 407 100% 0 0

Chromosomal Locations for CCDS 30590.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 12644547 12644714 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12651123 12651339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12661791 12661854 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 12665961 12666735 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1224 nt):
ATGGCTGTCCCCTGGCTAGTGCTACTCTTGGCATTGCCCATCTTTTTCCTGGGGGTCTTTGTCTGGGCTG
TCTTTGAGCACTTCCTCACCACGGATATCCCTGCTACCTTGCAGCATCCTGCCAAGTTGAGATTCCTGCA
TTGCATATTCCTCTACCTGGTCACTTTGGGGAATATATTTGAGAAGCTGGGAATTTGCTCCATGCCCAAA
TTTATTCGTTTTTTACATGATAGCGTGAGAATTAAAAAGGACCCTGAACTTGTGGTGACCGACCTGCGTT
TTGGGACGATACCCGTGAGGCTGTTCCAGCCGAAGGCAGCATCCTCCAGACCCCGGCGAGGCATCATCTT
CTACCATGGAGGGGCCACAGTATTTGGGAGCCTGGATTGTTACCATGGCCTGTGCAATTATCTGGCCCGG
GAGACTGAATCTGTACTTCTGATGATTGGGTACCGCAAGCTTCCTGACCACCATTCCCCTGCCCTTTTCC
AAGACTGCATGAATGCCTCCATTCACTTCCTGAAGGCCCTGGAAACCTATGGGGTGGACCCCTCCAGGGT
TGTGGTCTGTGGAGAAAGCGTCGGAGGTGCAGCGGTGGCCGCCATCACCCAGGCCTTGGTGGGCAGATCA
GATCTTCCCCGGATCCGGGCTCAGGTTCTGATTTATCCAGTTGTCCAGGCATTCTGTTTGCAGTTGCCAT
CCTTTCAGCAGAACCAAAATGTCCCATTACTTTCCCGGAAGTTCATGGTGACTTCTCTGTGTAACTATCT
GGCCATTGACCTCTCCTGGCGTGACGCCATCTTGAACGGCACTTGTGTACCCCCAGACGTCTGGAGGAAG
TACGAGAAGTGGCTCAGCCCTGACAACATCCCCAAGAAATTTAAGAACAGAGGCTACCAACCCTGGTCTC
CCGGCCCTTTTAATGAAGCTGCCTATCTAGAAGCCAAACATATGCTGGATGTAGAAAATTCACCCCTGAT
AGCAGATGATGAGGTCATCGCTCAGCTTCCTGAGGCCTTCCTGGTGAGCTGTGAGAATGACATACTCCGT
GATGACAGCTTGCTCTATAAGAAGCGCTTGGAGGACCAGGGGGTCCGCGTGACATGGTACCACCTGTATG
ATGGTTTTCACGGATCCATTATCTTTTTTGATAAGAAGGCTCTCTCTTTCCCATGTTCCCTGAAGATTGT
GAATGCTGTAGTCAGTTATATAAAGGGCATATGA

Translation (407 aa):
MAVPWLVLLLALPIFFLGVFVWAVFEHFLTTDIPATLQHPAKLRFLHCIFLYLVTLGNIFEKLGICSMPK
FIRFLHDSVRIKKDPELVVTDLRFGTIPVRLFQPKAASSRPRRGIIFYHGGATVFGSLDCYHGLCNYLAR
ETESVLLMIGYRKLPDHHSPALFQDCMNASIHFLKALETYGVDPSRVVVCGESVGGAAVAAITQALVGRS
DLPRIRAQVLIYPVVQAFCLQLPSFQQNQNVPLLSRKFMVTSLCNYLAIDLSWRDAILNGTCVPPDVWRK
YEKWLSPDNIPKKFKNRGYQPWSPGPFNEAAYLEAKHMLDVENSPLIADDEVIAQLPEAFLVSCENDILR
DDSLLYKKRLEDQGVRVTWYHLYDGFHGSIIFFDKKALSFPCSLKIVNAVVSYIKGI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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