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Report for CCDS56438.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56438.1 Public Homo sapiens 6 SNAP91 24 110 108 CCDS HistoryNCBI Gene:9892Re-query CCDS DB by CCDS ID:56438.1Re-query CCDS DB by GeneID:9892See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 56438.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000520302.5 ENSP00000428511.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520302.5Link to Ensembl Protein Viewer:ENSP00000428511.1Re-query CCDS DB by Nucleotide ID:ENST00000520302Re-query CCDS DB by Protein ID:ENSP00000428511
Original member Current member NCBI NM_001242793.2 NP_001229722.1 Accepted alive Link to Nucleotide Sequence:NM_001242793.2Link to Protein Sequence:NP_001229722.1Re-query CCDS DB by Nucleotide ID:NM_001242793Re-query CCDS DB by Protein ID:NP_001229722Link to BLAST:NP_001229722.1
Original member Current member NCBI NM_001376708.1 NP_001363637.1 Accepted alive Link to Nucleotide Sequence:NM_001376708.1Link to Protein Sequence:NP_001363637.1Re-query CCDS DB by Nucleotide ID:NM_001376708Re-query CCDS DB by Protein ID:NP_001363637Link to BLAST:NP_001363637.1
Original member Current member NCBI NM_001376709.1 NP_001363638.1 Accepted alive Link to Nucleotide Sequence:NM_001376709.1Link to Protein Sequence:NP_001363638.1Re-query CCDS DB by Nucleotide ID:NM_001376709Re-query CCDS DB by Protein ID:NP_001363638Link to BLAST:NP_001363638.1
Original member Current member NCBI NM_001376710.1 NP_001363639.1 Accepted alive Link to Nucleotide Sequence:NM_001376710.1Link to Protein Sequence:NP_001363639.1Re-query CCDS DB by Nucleotide ID:NM_001376710Re-query CCDS DB by Protein ID:NP_001363639Link to BLAST:NP_001363639.1
Original member Current member NCBI NM_001376711.1 NP_001363640.1 Accepted alive Link to Nucleotide Sequence:NM_001376711.1Link to Protein Sequence:NP_001363640.1Re-query CCDS DB by Nucleotide ID:NM_001376711Re-query CCDS DB by Protein ID:NP_001363640Link to BLAST:NP_001363640.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001229722.1 877 O60641-4 877 100% 0 0
NP_001363637.1 877 O60641-4 877 100% 0 0
NP_001363638.1 877 O60641-4 877 100% 0 0
NP_001363639.1 877 O60641-4 877 100% 0 0
NP_001363640.1 877 O60641-4 877 100% 0 0

Chromosomal Locations for CCDS 56438.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 83556153 83556245 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83560104 83560208 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83560864 83560947 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83575010 83575121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83576023 83576053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83580450 83580599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83582222 83582356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83591211 83591294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83592946 83593017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83593182 83593259 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83593478 83593741 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83594374 83594481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83601271 83601438 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83601585 83601599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83605685 83605803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83607699 83607808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83610650 83610677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83616969 83617039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83623301 83623342 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83641096 83641202 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83656754 83656865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83658999 83659092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83661502 83661604 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83662347 83662422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83665439 83665581 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 83707798 83707927 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2634 nt):
ATGTCGGGCCAAACGCTCACGGATCGGATCGCCGCCGCTCAGTACAGCGTTACAGGCTCTGCTGTAGCAA
GAGCGGTCTGCAAAGCCACTACTCATGAAGTAATGGGCCCCAAGAAAAAGCACCTGGACTATTTGATCCA
GGCTACCAACGAGACCAATGTTAATATTCCTCAGATGGCCGACACTCTCTTTGAGCGGGCAACAAACAGT
AGCTGGGTGGTTGTGTTTAAGGCTTTAGTGACAACACATCATCTCATGGTGCATGGAAATGAGAGATTTA
TTCAATATTTGGCTTCTAGAAATACACTATTCAATCTCAGCAATTTTTTGGACAAAAGTGGATCCCATGG
TTATGATATGTCTACCTTCATAAGGCGCTATAGTAGATATTTGAATGAAAAGGCTTTTTCTTACAGACAG
ATGGCCTTTGATTTTGCCAGGGTGAAGAAAGGGGCCGATGGTGTAATGAGGACAATGGCTCCCGAAAAGC
TGCTAAAGAGTATGCCAATACTACAGGGACAAATTGATGCACTGCTTGAATTTGATGTGCATCCAAATGA
ACTAACAAATGGTGTCATAAATGCAGCATTTATGCTTCTTTTCAAAGATCTTATCAAACTTTTTGCTTGC
TACAATGATGGTGTTATTAACTTACTCGAAAAGTTTTTTGAAATGAAGAAAGGACAATGTAAAGATGCTC
TAGAAATTTACAAACGATTTCTAACTAGAATGACACGAGTGTCTGAATTTCTCAAGGTTGCAGAGCAAGT
TGGTATTGATAAAGGTGACATTCCTGACCTCACACAGGCTCCCAGCAGTCTTATGGAGACGCTTGAACAG
CATCTAAATACATTAGAAGGAAAGAAACCTGGAAACAAATCTGGTGCTCCCTCTCCATTAAGTAAGTCTT
CTCCAGCCACAACTGTTACGTCTCCTAATTCTACACCAGCTAAAACTATTGACACATCCCCACCGGTTGA
TTTATTTGCAACTGCATCTGCGGCTGTCCCAGTCAGCACTTCTAAACCATCTAGTGATCTCCTGGACCTC
CAGCCAGACTTTTCCTCTGGAGGGGCAGCAGCAGCCGCAGCACCAGCACCACCACCACCTGCTGGAGGAG
CCACTGCATGGGGAGACCTTTTGGGAGAGGATTCTTTGGCTGCACTTTCCTCTGTTCCCTCTGAAGCACA
GATTTCAGATCCATTTGCACCAGAACCTACCCCTCCTACTACAACTGCTGAAATTGCAACTGCCTCAGCT
TCTGCCTCCACTACTACAACTGTTACTGCTGTCACTGCTGAAGTGGATCTCTTTGGAGATGCCTTTGCAG
CTTCTCCTGGGGAGGCCCCTGCAGCATCCGAAGGGGCCGCCGCACCAGCTACCCCAACCCCTGTAGCAGC
AGCACTTGATGCATGTTCAGGAAATGACCCCTTTGCCCCGTCTGAAGGTAGTGCAGAGGCTGCACCTGAG
CTGGACCTCTTTGCAATGAAGCCACCTGAGACCAGTGTTCCTGTAGTTACCCCTACAGCTAGCACAGCCC
CTCCAGTTCCCGCAACTGCTCCTTCTCCTGCTCCTGCCGTTGCAGCTGCTGCTGCTGCCACTACTGCTGC
CACCGCCGCTGCCACCACCACTACCACCACCTCCGCTGCCACCGCCACCACTGCTCCTCCTGCTCTAGAT
ATCTTTGGTGATTTATTTGAGTCCACTCCTGAAGTTGCTGCAGCGCCTAAGCCAGATGCTGCTCCTAGCA
TAGACCTGTTTAGTACAGATGCTTTCTCCTCTCCACCACAAGGGGCCTCTCCTGTGCCTGAGAGTTCTCT
CACTGCTGACCTCTTATCTGATGCATTTGGAAGTAGTGCTTCTGAACCCCAACCTGCATCTCAGGCTGCT
TCTAGTTCATCAGCATCGGCAGACCTACTAGCTGGATTTGGGGGTTCTTTCATGGCGCCTTCCCCATCTC
CAGTGACTCCAGCTCAGAATAACCTGCTACAGCCCAATTTTGAGGCAGCTTTTGGGACAACGCCTTCAAC
TTCCAGCAGCAGCTCCTTTGATCCATCAGTGTTTGATGGTCTAGGTGATCTTTTGATGCCAACCATGGCA
CCAGCTGGGCAGCCTGCACCTGTCTCAATGGTACCACCCAGTCCTGCAATGGCAGCCAGCAAAGCCCTTG
GAAGTGATCTTGATTCATCTCTTGCCAGCTTAGTAGGCAATCTTGGAATTTCTGGTACCACAACAAAAAA
GGGAGATCTTCAGTGGAATGCTGGAGAGAAAAAGTTGACTGGTGGAGCCAACTGGCAGCCTAAAGTAGCT
CCAGCAACCTGGTCAGCAGGCGTTCCACCAAGTGCACCTTTGCAAGGAGCTGTACCTCCAACCAGTTCAG
TTCCTCCTGTTGCCGGGGCCCCATCGGTTGGACAACCTGGAGCAGGATTTGGAATGCCTCCTGCTGGGAC
AGGCATGCCCATGATGCCTCAGCAGCCGGTCATGTTTGCACAGCCCATGATGAGGCCCCCCTTTGGAGCT
GCCGCTGTACCTGGCACGCAGCTTTCTCCAAGCCCTACACCTGCCAGTCAGAGTCCCAAGAAACCTCCAG
CAAAGGACCCATTAGCGGATCTTAACATCAAGGATTTCTTGTAA

Translation (877 aa):
MSGQTLTDRIAAAQYSVTGSAVARAVCKATTHEVMGPKKKHLDYLIQATNETNVNIPQMADTLFERATNS
SWVVVFKALVTTHHLMVHGNERFIQYLASRNTLFNLSNFLDKSGSHGYDMSTFIRRYSRYLNEKAFSYRQ
MAFDFARVKKGADGVMRTMAPEKLLKSMPILQGQIDALLEFDVHPNELTNGVINAAFMLLFKDLIKLFAC
YNDGVINLLEKFFEMKKGQCKDALEIYKRFLTRMTRVSEFLKVAEQVGIDKGDIPDLTQAPSSLMETLEQ
HLNTLEGKKPGNKSGAPSPLSKSSPATTVTSPNSTPAKTIDTSPPVDLFATASAAVPVSTSKPSSDLLDL
QPDFSSGGAAAAAAPAPPPPAGGATAWGDLLGEDSLAALSSVPSEAQISDPFAPEPTPPTTTAEIATASA
SASTTTTVTAVTAEVDLFGDAFAASPGEAPAASEGAAAPATPTPVAAALDACSGNDPFAPSEGSAEAAPE
LDLFAMKPPETSVPVVTPTASTAPPVPATAPSPAPAVAAAAAATTAATAAATTTTTTSAATATTAPPALD
IFGDLFESTPEVAAAPKPDAAPSIDLFSTDAFSSPPQGASPVPESSLTADLLSDAFGSSASEPQPASQAA
SSSSASADLLAGFGGSFMAPSPSPVTPAQNNLLQPNFEAAFGTTPSTSSSSSFDPSVFDGLGDLLMPTMA
PAGQPAPVSMVPPSPAMAASKALGSDLDSSLASLVGNLGISGTTTKKGDLQWNAGEKKLTGGANWQPKVA
PATWSAGVPPSAPLQGAVPPTSSVPPVAGAPSVGQPGAGFGMPPAGTGMPMMPQQPVMFAQPMMRPPFGA
AAVPGTQLSPSPTPASQSPKKPPAKDPLADLNIKDFL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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