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Report for CCDS1121.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1121.1 Public Homo sapiens 1 GON4L 24 110 108 CCDS HistoryNCBI Gene:54856Re-query CCDS DB by CCDS ID:1121.1Re-query CCDS DB by GeneID:54856See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1121.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000361040.9 ENSP00000354322.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000361040.9Link to Ensembl Protein Viewer:ENSP00000354322.5Re-query CCDS DB by Nucleotide ID:ENST00000361040Re-query CCDS DB by Protein ID:ENSP00000354322
Original member Current member EBI ENST00000622608.2 ENSP00000478593.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000622608.2Link to Ensembl Protein Viewer:ENSP00000478593.2Re-query CCDS DB by Nucleotide ID:ENST00000622608Re-query CCDS DB by Protein ID:ENSP00000478593
Original member Current member NCBI NM_001282861.2 NP_001269790.1 Accepted alive Link to Nucleotide Sequence:NM_001282861.2Link to Protein Sequence:NP_001269790.1Re-query CCDS DB by Nucleotide ID:NM_001282861Re-query CCDS DB by Protein ID:NP_001269790Link to BLAST:NP_001269790.1
Original member Current member NCBI NM_032292.6 NP_115668.4 Accepted alive Link to Nucleotide Sequence:NM_032292.6Link to Protein Sequence:NP_115668.4Re-query CCDS DB by Nucleotide ID:NM_032292Re-query CCDS DB by Protein ID:NP_115668Link to BLAST:NP_115668.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001269790.1 1529 Q3T8J9-2 1529 100% 0 0
NP_115668.4 1529 Q3T8J9-2 1529 100% 0 0

Chromosomal Locations for CCDS 1121.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 155764883 155766709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155767425 155767541 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155771067 155771217 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155773066 155773210 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155775002 155775173 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155776395 155776481 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155777622 155777820 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155783986 155784089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155785334 155785374 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155795050 155795151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155804949 155805141 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155813634 155813804 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155814330 155814449 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155815805 155815900 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155816212 155816262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155820606 155820656 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155821474 155821548 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155822286 155822476 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155826837 155827028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 155853276 155853780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4590 nt):
ATGTTGCCCTGTAAGAAGAGAAGAACTACAGTGACAGAGTCCCTACAGCATAAAGGCAATCAAGAGGAAA
ACAACGTAGACCTAGAATCAGCCGTTAAACCAGAATCTGACCAGGTTAAGGACTTGAGTTCGGTGTCACT
ATCCTGGGATCCAAGTCATGGCAGAGTAGCTGGCTTCGAAGTACAGTCTTTGCAGGATGCAGGAAATCAG
CTTGGTATGGAGGATACATCTCTGAGCTCTGGAATGCTCACCCAGAACACAAATGTACCAATTCTAGAAG
GTGTTGATGTGGCCATCTCTCAGGGAATCACCCTACCTTCCTTGGAGTCTTTTCACCCCCTTAATATACA
CATTGGTAAAGGAAAACTCCACGCTACTGGCTCAAAGAGAGGGAAAAAAATGACACTCAGGCCTGGGCCA
GTTACCCAAGAAGACAGATGTGATCATCTTACCCTAAAGGAGCCTTTTTCAGGAGAGCCTAGTGAAGAAG
TCAAGGAAGAAGGAGGGAAACCTCAAATGAATTCTGAAGGGGAGATACCTTCCCTGCCATCAGGCAGCCA
ATCTGCAAAACCAGTAAGCCAGCCCAGGAAATCAACCCAGCCAGATGTTTGTGCCTCTCCTCAAGAAAAG
CCACTCAGGACTCTGTTTCACCAACCTGAGGAAGAGATAGAAGATGGTGGACTCTTCATTCCAATGGAAG
AACAAGACAATGAAGAAAGTGAGAAAAGGAGAAAAAAGAAAAAGGGTACCAAGAGGAAACGAGATGGAAG
GGGTCAAGAAGGGACCTTGGCATATGACCTGAAACTGGATGACATGCTTGACCGTACCTTGGAGGATGGT
GCCAAGCAGCACAATCTAACAGCAGTCAATGTCCGAAACATCCTTCATGAAGTAATCACAAATGAACACG
TGGTAGCTATGATGAAAGCAGCCATCAGTGAGACGGAAGATATGCCAATGTTTGAGCCTAAAATGACACG
CTCTAAACTGAAGGAAGTAGTGGAAAAAGGAGTGGTAATTCCAACATGGAATATTTCACCAATTAAGAAG
GCCAATGAAATTAAGCCTCCTCAGTTTGTGGATATCCACCTTGAAGAAGATGATTCCTCAGATGAAGAAT
ACCAGCCGGATGATGAAGAAGAAGATGAAACTGCTGAAGAGAGCTTATTGGAAAGTGATGTTGAAAGCAC
TGCTTCATCTCCACGTGGGGCAAAGAAATCCAGATTGAGGCAGTCTTCTGAGATGACTGAAACAGATGAG
GAGAGTGGCATATTATCAGAGGCTGAGAAAGTCACCACACCAGCCATCAGGCACATCAGTGCTGAGGTAG
TGCCCATGGGGCCCCCGCCCCCTCCAAAGCCGAAACAGACCAGAGATAGTACTTTCATGGAGAAGTTACA
TGCGGTAGATGAGGAGCTGGCTTCCAGTCCAGTCTGCATGGATTCTTTCCAGCCCATGGATGACAGTCTC
ATTGCATTTCGAACGCGTTCTAAGATGCCCCTGAAAGATGTTCCCCTGGGCCAATTAGAGGCAGAGCTCC
AAGCTCCAGACATCACTCCAGATATGTATGACCCCAATACGGCAGATGATGAGGACTGGAAGATGTGGCT
GGGGGGACTTATGAATGATGATGTGGGGAATGAAGATGAAGCAGATGATGATGATGATCCAGAATATAAT
TTCCTGGAAGACCTCGATGAACCAGACACAGAGGATTTCCGGACTGACCGGGCAGTGAGAATCACCAAAA
AGGAAGTAAATGAGCTGATGGAAGAGCTGTTTGAAACTTTCCAAGATGAGATGGGATTCTCCAACATGGA
AGATGATGGCCCAGAAGAGGAGGAGTGTGTAGCTGAGCCTCGTCCTAACTTTAACACCCCTCAAGCTCTA
CGGTTTGAGGAACCACTGGCCAACCTGTTAAATGAACAACATCGGACAGTGAAGGAGCTATTTGAACAGC
TGAAGATGAAGAAATCTTCAGCCAAACAGCTGCAGGAAGTAGAGAAGGTTAAACCCCAGAGTGAGAAAGT
TCATCAGACTCTGATTCTGGACCCAGCACAGAGGAAGAGACTCCAGCAGCAGATGCAGCAGCACGTTCAG
CTCTTGACCCAAATCCACCTTCTTGCCACCTGCAACCCCAACCTCAATCCGGAGGCCACTACCACCAGGA
TATTTCTTAAAGAGCTGGGAACCTTTGCTCAAAGCTCCATCGCCCTTCACCATCAGTACAACCCCAAGTT
TCAGACCCTGTTCCAACCCTGTAACTTGATGGGAGCTATGCAGCTGATTGAAGACTTCAGCACACATGTC
AGCATTGACTGCAGCCCTCATAAAACTGTCAAGAAGACTGCGAATGAATTTCCCTGTTTGCCAAAGCAAG
TGGCTTGGATTCTGGCCACAAGCAAGGTTTTCATGTATCCAGAGTTACTTCCAGTGTGTTCCCTGAAGGC
AAAGAATCCCCAGGATAAGATCGTCTTCACCAAGGCTGAGGACAATTTGTTAGCTTTAGGACTGAAGCAT
TTTGAAGGAACTGAGTTTCCTAATCCTCTAATCAGCAAGTACCTTCTAACCTGCAAAACTGCCCACCAAC
TGACAGTGAGAATCAAGAACCTCAACATGAACAGAGCTCCTGACAACATCATTAAATTTTATAAGAAGAC
CAAACAGCTGCCAGTCCTAGGAAAATGCTGTGAAGAGATCCAGCCACATCAGTGGAAGCCACCTATAGAG
AGAGAAGAACACCGGCTCCCATTCTGGTTAAAGGCCAGTCTGCCATCCATCCAGGAAGAACTGCGGCACA
TGGCTGATGGTGCTAGAGAGGTAGGAAATATGACTGGAACCACTGAGATCAACTCAGATCGAAGCCTAGA
AAAAGACAATTTGGAGTTGGGGAGTGAATCTCGGTACCCACTGCTATTGCCTAAGGGTGTAGTCCTGAAA
CTGAAGCCAGTTGCCACCCGTTTCCCCAGGAAGGCTTGGAGACAGAAGCGTTCATCAGTCCTGAAGCCCC
TCCTTATCCAACCCAGCCCCTCTCTCCAGCCCAGCTTCAACCCTGGGAAAACACCAGCCCGATCAACTCA
TTCAGAAGCCCCTCCGAGCAAAATGGTGCTCCGGATTCCTCACCCAATACAGCCAGCCACTGTTTTACAG
ACAGTTCCAGGTGTCCCTCCACTGGGGGTCAGTGGAGGTGAGAGTTTTGAGTCTCCTGCAGCACTGCCTG
CTGTGCCCCCTGAGGCCAGGACAAGCTTCCCTCTGTCTGAGTCCCAGACTTTGCTCTCTTCTGCCCCTGT
GCCCAAGGTAATGCTGCCCTCCCTTGCCCCTTCTAAGTTTCGAAAGCCATATGTGAGACGGAGACCCTCA
AAGAGAAGAGGAGTCAAGGCCTCTCCCTGTATGAAACCTGCCCCTGTTATCCACCACCCTGCATCTGTTA
TCTTCACTGTTCCTGCTACCACTGTGAAGATTGTGAGCCTTGGCGGTGGCTGTAACATGATCCAGCCTGT
CAATGCGGCTGTGGCCCAGAGTCCCCAGACTATTCCCATCACTACCCTCTTGGTTAACCCTACTTCCTTC
CCCTGTCCATTGAACCAGTCCCTTGTGGCCTCCTCTGTCTCACCCTTAATTGTTTCTGGCAATTCTGTGA
ATCTTCCTATACCATCCACCCCTGAAGATAAGGCCCACGTGAATGTGGACATTGCTTGTGCTGTGGCTGA
TGGGGAAAATGCCTTTCAGGGCCTAGAACCCAAATTAGAGCCCCAGGAACTATCTCCTCTCTCTGCTACT
GTTTTCCCGAAAGTGGAACATAGCCCAGGGCCTCCACTAGCAGATGCAGAGTGCCAAGAAGGATTGTCAG
AGAATAGTGCCTGTCGCTGGACCGTTGTGAAAACAGAGGAGGGGAGGCAAGCTCTGGAGCCGCTCCCTCA
GGGCATCCAGGAGTCTCTAAACAACCCTACCCCTGGGGATTTAGAGGAAATTGTCAAGATGGAACCTGAA
GAAGCTAGAGAGGAAATCAGTGGATCCCCTGAGCGTGATATTTGTGATGACATCAAAGTGGAACATGCTG
TGGAATTGGACACTGGTGCCCCAAGCGAGGAGTTGAGCAGTGCTGGAGAAGTAACGAAACAGACAGTCTT
ACAGAAGGAAGAGGAGAGGAGTCAGCCAACTAAAACCCCTTCATCTTCTCAAGAGCCCCCTGATGAAGGA
ACCTCAGGGACAGATGTGAACAAAGGATCATCAAAGAATGCTTTGTCCTCAATGGATCCTGAAGTGAGGC
TTAGTAGCCCCCCAGGGAAGCCAGAAGATTCATCCAGTGTTGATGGTCAGTCAGTGGGGACTCCAGTTGG
GCCAGAAACTGGAGGAGAGAAGAATGGGCCAGAAGAAGAGGAAGAAGAGGACTTTGATGACCTCACCCAA
GATGAGGAAGATGAAATGTCATCAGCTTCTGAGGAATCTGTGCTTTCTGTCCCAGAACTCCAGGTGAGAG
CTGGAGAATATTCTCAAGTATTTCGTGGACTCAGTAATATGTATCACTTATTGATATGCCACCTGCTTGC
TTGCTGCACTATGGATAGTCCTAAAATCATTTGTATTTGA

Translation (1529 aa):
MLPCKKRRTTVTESLQHKGNQEENNVDLESAVKPESDQVKDLSSVSLSWDPSHGRVAGFEVQSLQDAGNQ
LGMEDTSLSSGMLTQNTNVPILEGVDVAISQGITLPSLESFHPLNIHIGKGKLHATGSKRGKKMTLRPGP
VTQEDRCDHLTLKEPFSGEPSEEVKEEGGKPQMNSEGEIPSLPSGSQSAKPVSQPRKSTQPDVCASPQEK
PLRTLFHQPEEEIEDGGLFIPMEEQDNEESEKRRKKKKGTKRKRDGRGQEGTLAYDLKLDDMLDRTLEDG
AKQHNLTAVNVRNILHEVITNEHVVAMMKAAISETEDMPMFEPKMTRSKLKEVVEKGVVIPTWNISPIKK
ANEIKPPQFVDIHLEEDDSSDEEYQPDDEEEDETAEESLLESDVESTASSPRGAKKSRLRQSSEMTETDE
ESGILSEAEKVTTPAIRHISAEVVPMGPPPPPKPKQTRDSTFMEKLHAVDEELASSPVCMDSFQPMDDSL
IAFRTRSKMPLKDVPLGQLEAELQAPDITPDMYDPNTADDEDWKMWLGGLMNDDVGNEDEADDDDDPEYN
FLEDLDEPDTEDFRTDRAVRITKKEVNELMEELFETFQDEMGFSNMEDDGPEEEECVAEPRPNFNTPQAL
RFEEPLANLLNEQHRTVKELFEQLKMKKSSAKQLQEVEKVKPQSEKVHQTLILDPAQRKRLQQQMQQHVQ
LLTQIHLLATCNPNLNPEATTTRIFLKELGTFAQSSIALHHQYNPKFQTLFQPCNLMGAMQLIEDFSTHV
SIDCSPHKTVKKTANEFPCLPKQVAWILATSKVFMYPELLPVCSLKAKNPQDKIVFTKAEDNLLALGLKH
FEGTEFPNPLISKYLLTCKTAHQLTVRIKNLNMNRAPDNIIKFYKKTKQLPVLGKCCEEIQPHQWKPPIE
REEHRLPFWLKASLPSIQEELRHMADGAREVGNMTGTTEINSDRSLEKDNLELGSESRYPLLLPKGVVLK
LKPVATRFPRKAWRQKRSSVLKPLLIQPSPSLQPSFNPGKTPARSTHSEAPPSKMVLRIPHPIQPATVLQ
TVPGVPPLGVSGGESFESPAALPAVPPEARTSFPLSESQTLLSSAPVPKVMLPSLAPSKFRKPYVRRRPS
KRRGVKASPCMKPAPVIHHPASVIFTVPATTVKIVSLGGGCNMIQPVNAAVAQSPQTIPITTLLVNPTSF
PCPLNQSLVASSVSPLIVSGNSVNLPIPSTPEDKAHVNVDIACAVADGENAFQGLEPKLEPQELSPLSAT
VFPKVEHSPGPPLADAECQEGLSENSACRWTVVKTEEGRQALEPLPQGIQESLNNPTPGDLEEIVKMEPE
EAREEISGSPERDICDDIKVEHAVELDTGAPSEELSSAGEVTKQTVLQKEEERSQPTKTPSSSQEPPDEG
TSGTDVNKGSSKNALSSMDPEVRLSSPPGKPEDSSSVDGQSVGTPVGPETGGEKNGPEEEEEEDFDDLTQ
DEEDEMSSASEESVLSVPELQVRAGEYSQVFRGLSNMYHLLICHLLACCTMDSPKIICI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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