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Report for CCDS5722.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5722.1 Public Homo sapiens 7 ORAI2 24 110 108 CCDS HistoryNCBI Gene:80228Re-query CCDS DB by CCDS ID:5722.1Re-query CCDS DB by GeneID:80228See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)


Attributes
CDS uses downstream AUG

Sequence IDs included in CCDS 5722.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000356387.6 ENSP00000348752.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000356387.6Link to Ensembl Protein Viewer:ENSP00000348752.2Re-query CCDS DB by Nucleotide ID:ENST00000356387Re-query CCDS DB by Protein ID:ENSP00000348752
Original member Current member EBI ENST00000403646.8 ENSP00000385489.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000403646.8Link to Ensembl Protein Viewer:ENSP00000385489.3Re-query CCDS DB by Nucleotide ID:ENST00000403646Re-query CCDS DB by Protein ID:ENSP00000385489
Original member Current member EBI ENST00000473939.2 ENSP00000417928.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000473939.2Link to Ensembl Protein Viewer:ENSP00000417928.1Re-query CCDS DB by Nucleotide ID:ENST00000473939Re-query CCDS DB by Protein ID:ENSP00000417928
Original member Current member EBI ENST00000478730.7 ENSP00000418140.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000478730.7Link to Ensembl Protein Viewer:ENSP00000418140.1Re-query CCDS DB by Nucleotide ID:ENST00000478730Re-query CCDS DB by Protein ID:ENSP00000418140
Original member Current member EBI ENST00000498661.6 ENSP00000418464.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000498661.6Link to Ensembl Protein Viewer:ENSP00000418464.2Re-query CCDS DB by Nucleotide ID:ENST00000498661Re-query CCDS DB by Protein ID:ENSP00000418464
Original member Current member EBI ENST00000495936.7 ENSP00000420178.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000495936.7Link to Ensembl Protein Viewer:ENSP00000420178.2Re-query CCDS DB by Nucleotide ID:ENST00000495936Re-query CCDS DB by Protein ID:ENSP00000420178
Original member Current member EBI ENST00000611770.5 ENSP00000478113.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000611770.5Link to Ensembl Protein Viewer:ENSP00000478113.1Re-query CCDS DB by Nucleotide ID:ENST00000611770Re-query CCDS DB by Protein ID:ENSP00000478113
Original member Current member NCBI NM_001126340.3 NP_001119812.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001126340.3Link to Protein Sequence:NP_001119812.1Re-query CCDS DB by Nucleotide ID:NM_001126340Re-query CCDS DB by Protein ID:NP_001119812Link to BLAST:NP_001119812.1
Original member Current member NCBI NM_001271818.2 NP_001258747.1 Accepted alive Link to Nucleotide Sequence:NM_001271818.2Link to Protein Sequence:NP_001258747.1Re-query CCDS DB by Nucleotide ID:NM_001271818Re-query CCDS DB by Protein ID:NP_001258747Link to BLAST:NP_001258747.1
Original member Current member NCBI NM_032831.4 NP_116220.1 Accepted alive Link to Nucleotide Sequence:NM_032831.4Link to Protein Sequence:NP_116220.1Re-query CCDS DB by Nucleotide ID:NM_032831Re-query CCDS DB by Protein ID:NP_116220Link to BLAST:NP_116220.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001119812.1 254 Q96SN7 254 100% 0 0
NP_001258747.1 254 Q96SN7 254 100% 0 0
NP_116220.1 254 Q96SN7 254 100% 0 0

Chromosomal Locations for CCDS 5722.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 102438957 102439181 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 102446513 102447052 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (765 nt):
ATGAGTGCTGAGCTTAACGTGCCTATCGACCCCTCTGCTCCTGCCTGCCCTGAGCCCGGCCATAAGGGCA
TGGATTACCGGGACTGGGTCCGCCGCAGCTACCTGGAACTGGTCACCTCTAACCACCACTCGGTACAGGC
CCTGTCGTGGCGGAAGCTCTACCTGAGCAGGGCCAAGCTGAAGGCCTCCAGCAGGACCTCCGCCCTCCTC
TCCGGCTTTGCCATGGTGGCCATGGTGGAGGTGCAGCTGGAGACGCAGTACCAGTACCCGCGGCCGCTGC
TGATTGCCTTCAGCGCCTGCACCACGGTGCTGGTGGCCGTGCACCTGTTCGCCCTCCTCATCAGCACCTG
CATCCTGCCCAATGTGGAGGCCGTGAGCAACATCCACAACCTGAACTCCATCAGCGAGTCCCCGCATGAG
CGCATGCACCCCTACATCGAGCTGGCCTGGGGCTTCTCCACCGTGCTTGGCATCCTACTCTTCCTGGCCG
AGGTGGTGCTGCTCTGCTGGATCAAGTTCCTCCCCGTGGATGCCCGGCGCCAGCCTGGCCCCCCACCTGG
CCCTGGGAGTCACACGGGCTGGCAGGCCGCCCTGGTGTCCACCATCATCATGGTGCCCGTGGGCCTCATC
TTCGTGGTCTTCACCATCCACTTCTACCGCTCCCTGGTGCGCCACAAAACGGAGCGCCACAACCGCGAGA
TCGAGGAGCTCCACAAGCTCAAGGTCCAGCTGGACGGGCATGAGCGCAGCCTGCAGGTCTTGTGA

Translation (254 aa):
MSAELNVPIDPSAPACPEPGHKGMDYRDWVRRSYLELVTSNHHSVQALSWRKLYLSRAKLKASSRTSALL
SGFAMVAMVEVQLETQYQYPRPLLIAFSACTTVLVAVHLFALLISTCILPNVEAVSNIHNLNSISESPHE
RMHPYIELAWGFSTVLGILLFLAEVVLLCWIKFLPVDARRQPGPPPGPGSHTGWQAALVSTIIMVPVGLI
FVVFTIHFYRSLVRHKTERHNREIEELHKLKVQLDGHERSLQVL


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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