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Report for CCDS46222.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
46222.1 Public Homo sapiens 2 MYT1L 24 110 108 CCDS HistoryNCBI Gene:23040Re-query CCDS DB by CCDS ID:46222.1Re-query CCDS DB by GeneID:23040See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 46222.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000399161.8 ENSP00000382114.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000399161.8Link to Ensembl Protein Viewer:ENSP00000382114.3Re-query CCDS DB by Nucleotide ID:ENST00000399161Re-query CCDS DB by Protein ID:ENSP00000382114
Original member Current member EBI ENST00000649207.1 ENSP00000496986.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000649207.1Link to Ensembl Protein Viewer:ENSP00000496986.1Re-query CCDS DB by Nucleotide ID:ENST00000649207Re-query CCDS DB by Protein ID:ENSP00000496986
Original member Current member EBI ENST00000648928.1 ENSP00000497017.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648928.1Link to Ensembl Protein Viewer:ENSP00000497017.1Re-query CCDS DB by Nucleotide ID:ENST00000648928Re-query CCDS DB by Protein ID:ENSP00000497017
Original member Current member EBI ENST00000648316.1 ENSP00000497870.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000648316.1Link to Ensembl Protein Viewer:ENSP00000497870.1Re-query CCDS DB by Nucleotide ID:ENST00000648316Re-query CCDS DB by Protein ID:ENSP00000497870
Original member Current member NCBI NM_001329847.2 NP_001316776.1 Accepted alive Link to Nucleotide Sequence:NM_001329847.2Link to Protein Sequence:NP_001316776.1Re-query CCDS DB by Nucleotide ID:NM_001329847Re-query CCDS DB by Protein ID:NP_001316776Link to BLAST:NP_001316776.1
Original member Current member NCBI NM_001329848.1 NP_001316777.1 Accepted alive Link to Nucleotide Sequence:NM_001329848.1Link to Protein Sequence:NP_001316777.1Re-query CCDS DB by Nucleotide ID:NM_001329848Re-query CCDS DB by Protein ID:NP_001316777Link to BLAST:NP_001316777.1
Original member Current member NCBI NM_015025.4 NP_055840.2 Accepted alive Link to Nucleotide Sequence:NM_015025.4Link to Protein Sequence:NP_055840.2Re-query CCDS DB by Nucleotide ID:NM_015025Re-query CCDS DB by Protein ID:NP_055840Link to BLAST:NP_055840.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001316776.1 1184 Q9UL68-4 1184 100% 0 0
NP_001316777.1 1184 Q9UL68-4 1184 100% 0 0
NP_055840.2 1184 Q9UL68-4 1184 100% 0 0

Chromosomal Locations for CCDS 46222.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 1791867 1792007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1792321 1792464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1801696 1801799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1809076 1809167 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1839149 1839370 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1840760 1840843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1851641 1851703 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1886539 1886607 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1887488 1887609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1889241 1889477 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1892037 1892287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1903080 1903294 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1910240 1910347 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1912020 1912110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1917205 1917339 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1922292 1923263 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1942982 1943334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1979165 1979227 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1979521 1979554 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 1979723 1979777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3555 nt):
ATGGAGGTGGACACCGAGGAGAAGCGGCATCGCACGCGGTCCAAAGGGGTTCGAGTTCCCGTGGAACCAG
CCATACAAGAGCTGTTCAGCTGTCCCACCCCTGGCTGTGACGGCAGTGGTCATGTCAGTGGCAAATATGC
AAGACACAGAAGTGTATATGGTTGTCCCTTGGCGAAAAAAAGAAAAACACAAGATAAACAGCCCCAGGAA
CCTGCTCCTAAACGAAAGCCATTTGCCGTGAAAGCAGACAGCTCCTCAGTGGATGAGTGTGACGACAGTG
ATGGGACTGAGGACATGGATGAGAAGGAGGAGGATGAGGGGGAGGAGTACTCCGAGGACAATGATGAGCC
AGGGGATGAGGACGAGGAGGACGAGGAGGGGGACCGGGAGGAGGAGGAGGAGATCGAGGAGGAGGATGAG
GACGATGACGAGGATGGAGAAGATGTGGAGGATGAAGAAGAGGAAGAGGAGGAGGAGGAGGAGGAGGAAG
AGGAAGAAGAAAACGAAGACCATCAAATGAATTGTCACAATACTCGAATAATGCAAGACACAGAAAAGGA
TGATAACAATAATGACGAATATGACAATTACGATGAACTGGTGGCCAAGTCATTGTTAAACCTCGGCAAA
ATCGCTGAGGATGCAGCCTACCGGGCCAGGACTGAGTCAGAAATGAACAGCAATACCTCCAATAGTCTGG
AAGACGATAGTGACAAAAACGAAAACCTGGGTCGGAAAAGTGAGTTGAGTTTAGACTTAGACAGTGATGT
TGTTAGAGAAACAGTGGACTCCCTTAAACTATTAGCCCAAGGACACGGTGTTGTGCTCTCAGAAAACATG
AATGACAGAAATTATGCAGACAGCATGTCGCAGCAAGACAGTAGAAATATGAATTACGTCATGTTGGGGA
AGCCCATGAACAACGGACTCATGGAAAAGATGGTGGAGGAGAGCGATGAGGAGGTGTGTCTGAGCAGTCT
GGAGTGTTTGAGGAATCAGTGCTTCGACCTGGCCAGGAAGCTCAGTGAGACCAACCCGCAGGAGAGGAAT
CCGCAGCAGAACATGAACATCCGTCAGCATGTCCGGCCAGAAGAGGACTTCCCCGGAAGGACGCCGGACA
GAAACTACTCGGACATGCTGAACCTCATGCGGCTGGAGGAGCAGTTGAGCCCCCGGTCGAGAGTGTTTGC
CAGCTGTGCGAAGGAGGATGGGTGTCATGAGCGGGACGACGATACCACCTCTGTGAACTCGGACAGGTCT
GAAGAGGTGTTCGACATGACCAAGGGGAACCTGACCCTGCTGGAGAAAGCCATCGCTTTGGAAACGGAAA
GAGCAAAGGCCATGAGGGAGAAGATGGCCATGGAAGCTGGGAGGAGGGACAATATGAGGTCATATGAGGA
CCAGTCTCCGAGACAACTTCCCGGGGAGGACAGAAAGCCTAAATCCAGTGACAGCCATGTCAAAAAGCCA
TACTATGATCCCTCAAGAACAGAAAAGAAAGAGAGCAAGTGTCCAACCCCCGGGTGTGATGGAACCGGCC
ACGTAACTGGGCTGTACCCACATCACCGCAGCCTGTCCGGATGCCCGCACAAAGATAGGGTCCCTCCAGA
AATCCTTGCCATGCATGAAAGTGTCCTCAAGTGCCCCACTCCGGGCTGCACGGGGCGCGGGCATGTCAAC
AGCAACAGGAACTCCCACCGAAGCCTCTCCGGATGCCCGATCGCTGCAGCAGAGAAACTGGCCAAGGCAC
AGGAAAAGCACCAGAGCTGCGACGTGTCCAAGTCCAGCCAGGCCTCGGACCGCGTGCTCAGGCCAATGTG
CTTTGTGAAGCAGCTGGAGATTCCTCAGTATGGCTACAGAAACAATGTCCCCACAACTACGCCGCGTTCC
AACCTGGCCAAGGAGCTCGAGAAATATTCCAAGACCTCGTTTGAATACAACAGTTACGACAACCATACTT
ATGGCAAGCGAGCCATAGCTCCCAAGGTGCAAACCAGGGATATATCCCCCAAAGGATATGATGATGCGAA
GCGGTACTGCAAGGACCCCAGCCCCAGCAGCAGCAGCACCAGCAGCTACGCGCCCAGCAGCAGCAGCAAC
CTGAGCTGCGGCGGGGGCAGCAGCGCCAGCAGCACGTGCAGCAAGAGCAGCTTCGACTACACGCACGACA
TGGAGGCGGCCCACATGGCGGCCACCGCCATCCTCAACCTGTCCACGCGCTGCCGCGAGATGCCGCAGAA
CCTGAGCACCAAGCCGCAGGACCTGTGCGCCACGCGGAACCCTGACATGGAGGTGGATGAGAACGGGACC
CTGGACCTCAGCATGAACAAGCAGAGGCCGCGGGACAGCTGCTGCCCCATCCTGACCCCTCTGGAGCCCA
TGTCCCCCCAGCAGCAGGCAGTGATGAACAACCGGTGTTTCCAGCTGGGCGAGGGCGACTGCTGGGACTT
GCCCGTAGACTACACCAAAATGAAACCCCGGAGGATAGACGAGGACGAGTCCAAAGACATTACTCCAGAA
GACTTGGACCCATTCCAGGAGGCTCTAGAAGAAAGACGGTATCCCGGGGAGGTGACCATCCCAAGTCCCA
AACCCAAGTACCCTCAGTGCAAGGAGAGCAAAAAGGACTTAATAACTCTGTCTGGCTGCCCCCTGGCGGA
CAAAAGCATTCGAAGTATGCTGGCCACCAGCTCCCAAGAACTCAAGTGCCCCACGCCTGGCTGTGATGGT
TCTGGACATATCACCGGCAATTATGCTTCTCATCGGAGCCTTTCAGGTTGCCCAAGAGCAAAGAAAAGTG
GTATCAGGATAGCACAGAGCAAAGAAGATAAAGAAGATCAAGAACCCATCAGGTGTCCGGTCCCCGGGTG
CGACGGCCAGGGCCACATCACTGGGAAGTACGCGTCCCATCGCAGCGCCTCCGGGTGCCCCTTGGCGGCC
AAGAGGCAGAAAGACGGGTACCTGAATGGCTCCCAGTTCTCCTGGAAGTCGGTCAAGACGGAAGGCATGT
CCTGCCCCACGCCAGGATGCGACGGCTCAGGCCACGTCAGCGGCAGCTTCCTCACACACCGCAGCTTGTC
AGGATGCCCGAGAGCCACGTCAGCGATGAAGAAGGCAAAGCTTTCTGGAGAGCAGATGCTGACCATCAAA
CAGCGGGCCAGCAACGGTATAGAAAATGATGAAGAAATCAAACAGTTAGATGAAGAAATCAAGGAGCTAA
ATGAATCCAATTCCCAGATGGAAGCCGATATGATTAAACTCAGAACTCAGATTACCACGATGGAGAGCAA
CCTGAAGACCATCGAAGAGGAGAACAAAGTGATTGAGCAGCAGAACGAGTCTCTCCTCCACGAGCTGGCG
AACCTGAGCCAGTCTCTGATCCACAGCCTGGCTAACATCCAGCTGCCGCACATGGATCCAATCAATGAAC
AAAATTTTGATGCTTACGTGACTACTTTGACGGAAATGTATACAAATCAAGATCGTTATCAGAGTCCAGA
AAATAAAGCCCTACTGGAAAATATAAAGCAGGCTGTGAGAGGAATTCAGGTCTGA

Translation (1184 aa):
MEVDTEEKRHRTRSKGVRVPVEPAIQELFSCPTPGCDGSGHVSGKYARHRSVYGCPLAKKRKTQDKQPQE
PAPKRKPFAVKADSSSVDECDDSDGTEDMDEKEEDEGEEYSEDNDEPGDEDEEDEEGDREEEEEIEEEDE
DDDEDGEDVEDEEEEEEEEEEEEEEEENEDHQMNCHNTRIMQDTEKDDNNNDEYDNYDELVAKSLLNLGK
IAEDAAYRARTESEMNSNTSNSLEDDSDKNENLGRKSELSLDLDSDVVRETVDSLKLLAQGHGVVLSENM
NDRNYADSMSQQDSRNMNYVMLGKPMNNGLMEKMVEESDEEVCLSSLECLRNQCFDLARKLSETNPQERN
PQQNMNIRQHVRPEEDFPGRTPDRNYSDMLNLMRLEEQLSPRSRVFASCAKEDGCHERDDDTTSVNSDRS
EEVFDMTKGNLTLLEKAIALETERAKAMREKMAMEAGRRDNMRSYEDQSPRQLPGEDRKPKSSDSHVKKP
YYDPSRTEKKESKCPTPGCDGTGHVTGLYPHHRSLSGCPHKDRVPPEILAMHESVLKCPTPGCTGRGHVN
SNRNSHRSLSGCPIAAAEKLAKAQEKHQSCDVSKSSQASDRVLRPMCFVKQLEIPQYGYRNNVPTTTPRS
NLAKELEKYSKTSFEYNSYDNHTYGKRAIAPKVQTRDISPKGYDDAKRYCKDPSPSSSSTSSYAPSSSSN
LSCGGGSSASSTCSKSSFDYTHDMEAAHMAATAILNLSTRCREMPQNLSTKPQDLCATRNPDMEVDENGT
LDLSMNKQRPRDSCCPILTPLEPMSPQQQAVMNNRCFQLGEGDCWDLPVDYTKMKPRRIDEDESKDITPE
DLDPFQEALEERRYPGEVTIPSPKPKYPQCKESKKDLITLSGCPLADKSIRSMLATSSQELKCPTPGCDG
SGHITGNYASHRSLSGCPRAKKSGIRIAQSKEDKEDQEPIRCPVPGCDGQGHITGKYASHRSASGCPLAA
KRQKDGYLNGSQFSWKSVKTEGMSCPTPGCDGSGHVSGSFLTHRSLSGCPRATSAMKKAKLSGEQMLTIK
QRASNGIENDEEIKQLDEEIKELNESNSQMEADMIKLRTQITTMESNLKTIEEENKVIEQQNESLLHELA
NLSQSLIHSLANIQLPHMDPINEQNFDAYVTTLTEMYTNQDRYQSPENKALLENIKQAVRGIQV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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