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Report for CCDS8682.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8682.1 Public Homo sapiens 12 PLEKHA5 24 110 108 CCDS HistoryNCBI Gene:54477Re-query CCDS DB by CCDS ID:8682.1Re-query CCDS DB by GeneID:54477See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8682.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000299275.10 ENSP00000299275.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000299275.10Link to Ensembl Protein Viewer:ENSP00000299275.6Re-query CCDS DB by Nucleotide ID:ENST00000299275Re-query CCDS DB by Protein ID:ENSP00000299275
Original member Current member NCBI NM_019012.6 NP_061885.2 Accepted alive Link to Nucleotide Sequence:NM_019012.6Link to Protein Sequence:NP_061885.2Re-query CCDS DB by Nucleotide ID:NM_019012Re-query CCDS DB by Protein ID:NP_061885Link to BLAST:NP_061885.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_061885.2 1116 Q9HAU0-1 1116 100% 0 0

Chromosomal Locations for CCDS 8682.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 19129800 19129888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19130051 19130130 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19132393 19132450 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19253940 19254023 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19255045 19255165 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19257433 19257537 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19260949 19261021 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19265750 19265850 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19269770 19269885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19274516 19274983 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19283280 19283745 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19287473 19287556 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19320562 19320624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19322310 19322390 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19322518 19322667 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19336515 19336616 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19343323 19343434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19345842 19345888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19348399 19348519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19353884 19354002 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19358228 19358437 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19359412 19359546 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19361582 19361706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19365964 19366109 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 19369693 19369787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3351 nt):
ATGGCGGCGGATCTGAACCTGGAGTGGATCTCCCTGCCCCGGTCCTGGACTTACGGGATCACCAGGGGCG
GCCGAGTCTTCTTCATCAACGAGGAGGCCAAGAGCACCACCTGGCTGCACCCCGTCACCGGCGAGGCGGT
GGTCACCGGACACCGGCGGCAGAGCACAGATTTGCCTACTGGCTGGGAAGAAGCATATACTTTTGAAGGT
GCAAGATACTATATAAACCATAATGAAAGGAAAGTGACCTGCAAACATCCAGTCACAGGACAACCATCAC
AGGACAATTGTATTTTTGTAGTGAATGAACAGACTGTTGCAACCATGACATCTGAAGAAAAGAAGGAACG
GCCAATAAGTATGATAAATGAAGCTTCTAACTATAACGTGACTTCAGATTATGCAGTGCATCCAATGAGC
CCTGTAGGCAGAACTTCACGAGCTTCAAAAAAAGTTCATAATTTTGGAAAGAGGTCAAATTCAATTAAAA
GGAATCCTAATGCACCGGTTGTCAGACGAGGTTGGCTTTATAAACAGGACAGTACTGGCATGAAATTGTG
GAAGAAACGCTGGTTTGTGCTTTCTGACCTTTGCCTCTTTTATTATAGAGATGAGAAAGAAGAGGGTATC
CTGGGAAGCATACTGTTACCTAGTTTTCAGATAGCTTTGCTTACCTCTGAAGATCACATTAATCGCAAAT
ATGCTTTTAAGGCAGCCCATCCAAACATGCGGACCTATTATTTCTGCACTGATACAGGAAAGGAAATGGA
GTTGTGGATGAAAGCCATGTTAGATGCTGCCCTAGTACAGACAGAACCTGTGAAAAGAGTGGACAAGATT
ACATCTGAAAATGCACCAACTAAAGAAACCAATAACATTCCCAACCATAGAGTGCTAATTAAACCAGAGA
TCCAAAACAATCAAAAAAACAAGGAAATGAGCAAAATTGAAGAAAAAAAGGCATTAGAAGCTGAAAAATA
TGGATTTCAGAAGGATGGTCAAGATAGACCCTTAACAAAAATTAATAGTGTAAAGCTGAATTCTCTGCCA
TCTGAATATGAGAGTGGGTCAGCATGCCCTGCTCAGACTGTGCACTACAGACCAATCAACTTGAGCAGTT
CAGAGAACAAAATAGTCAATGTTAGCCTGGCAGATCTTAGAGGTGGAAATCGCCCCAATACAGGGCCCTT
ATACACAGAGGCCGATCGAGTCATACAGAGAACAAATTCAATGCAGCAGTTGGAACAGTGGATTAAAATC
CAGAAGGGGAGGGGTCATGAAGAAGAAACCAGGGGAGTAATTTCTTACCAAACATTACCAAGAAATATGC
CAAGTCACAGAGCCCAGATTATGGCCCGCTACCCTGAAGGTTATAGAACACTCCCAAGAAACAGCAAGAC
AAGGCCTGAAAGTATCTGCAGTGTAACCCCTTCCACTCATGACAAGACATTAGGACCCGGAGCGGAGGAG
AAACGGAGGTCCATGAGAGATGACACAATGTGGCAGCTCTACGAATGGCAGCAGCGTCAGTTTTATAACA
AACAGAGCACCCTCCCTCGACACAGTACTTTGAGTAGTCCCAAAACCATGGTAAATATTTCTGACCAGAC
AATGCACTCTATTCCCACATCACCTTCCCACGGGTCAATAGCTGCTTATCAGGGATACTCCCCTCAACGA
ACTTACAGATCGGAAGTGTCTTCACCAATTCAGAGAGGAGATGTGACAATAGACCGCAGACACAGGGCCC
ATCACCCTAAGCATGTCTATGTGCCTGACAGAAGGTCAGTGCCAGCTGGCCTGACTTTACAGTCTGTTAG
TCCCCAGAGCCTCCAAGGGAAAACGCTGTCACAAGATGAAGGTAGAGGCACATTATACAAATACAGACCT
GAAGAAGTAGATATTGATGCCAAGTTAAGCCGATTATGTGAACAAGATAAAGTGGTGCATGCTCTGGAAG
AGAAACTTCAGCAACTCCACAAGGAGAAATACACGCTTGAGCAAGCTTTGCTATCAGCCAGCCAAGAGAT
AGAAATGCATGCAGATAACCCAGCAGCCATTCAGACAGTGGTGTTACAAAGGGATGATTTACAAAATGGA
CTGCTTAGTACGTGTCGAGAACTTTCTCGAGCCACTGCCGAATTGGAACGAGCATGGAGAGAATATGATA
AGTTAGAATACGATGTAACTGTTACCAGGAACCAGATGCAAGAGCAGCTGGATCACCTTGGTGAAGTTCA
GACGGAATCAGCAGGAATTCAGCGTGCACAGATTCAGAAAGAACTTTGGCGAATTCAGGATGTCATGGAA
GGGCTGAGTAAACATAAGCAGCAAAGAGGTACTACAGAAATAGGTATGATAGGATCAAAGCCTTTCTCAA
CAGTTAAGTACAAAAATGAGGGTCCAGATTATAGACTCTACAAGAGTGAACCAGAGTTAACAACAGTGGC
AGAAGTTGATGAATCTAATGGAGAAGAAAAATCAGAACCTGTTTCAGAGATAGAAACTTCAGTTGTTAAA
GGTTCCCACTTTCCTGTTGGAGTAGTCCCTCCAAGAGCAAAATCACCAACACCCGAATCTTCGACAATAG
CTTCCTATGTAACCTTGAGGAAAACTAAGAAGATGATGGATCTAAGAACGGAAAGACCAAGAAGTGCAGT
GGAACAGCTCTGTTTGGCTGAAAGTACTCGACCAAGGATGACTGTGGAAGAGCAAATGGAAAGAATAAGA
AGACATCAACAAGCGTGCCTGAGGGAGAAGAAAAAAGGGTTAAATGTTATCGGTGCTTCAGACCAGTCAC
CCTTACAAAGCCCTTCAAATTTAAGGGATAATCCATTTAGGACTACTCAGACTCGAAGGAGGGATGATAA
GGAACTGGACACTGCCATTAGAGAAAATGATGTAAAGCCAGACCATGAAACTCCTGCAACAGAAATTGTT
CAACTAAAAGAAACCGAACCCCAAAATGTGGACTTCAGCAAAGAGTTAAAAAAAACTGAAAACATTTCAT
ATGAAATGCTTTTTGAACCTGAGCCAAATGGAGTAAATTCTGTGGAAATGATGGATAAAGAAAGAAACAA
AGACAAAATGCCTGAGGATGTTACATTCAGCCCTCAAGATGAAACACAGACCGCAAATCATAAACCAGAA
GAGCATCCTGAAGAAAATACAAAGAACAGTGTTGACGAACAGGAAGAAACTGTTATTTCTTACGAATCAA
CTCCTGAGGTTTCTAGAGGAAATCAAACAATGGCAGTGAAAAGTCTGTCCCCATCTCCTGAGTCCTCGGC
ATCGCCAGTTCCATCCACTCAGCCGCAGCTCACAGAAGGATCACATTTCATGTGTGTGTAG

Translation (1116 aa):
MAADLNLEWISLPRSWTYGITRGGRVFFINEEAKSTTWLHPVTGEAVVTGHRRQSTDLPTGWEEAYTFEG
ARYYINHNERKVTCKHPVTGQPSQDNCIFVVNEQTVATMTSEEKKERPISMINEASNYNVTSDYAVHPMS
PVGRTSRASKKVHNFGKRSNSIKRNPNAPVVRRGWLYKQDSTGMKLWKKRWFVLSDLCLFYYRDEKEEGI
LGSILLPSFQIALLTSEDHINRKYAFKAAHPNMRTYYFCTDTGKEMELWMKAMLDAALVQTEPVKRVDKI
TSENAPTKETNNIPNHRVLIKPEIQNNQKNKEMSKIEEKKALEAEKYGFQKDGQDRPLTKINSVKLNSLP
SEYESGSACPAQTVHYRPINLSSSENKIVNVSLADLRGGNRPNTGPLYTEADRVIQRTNSMQQLEQWIKI
QKGRGHEEETRGVISYQTLPRNMPSHRAQIMARYPEGYRTLPRNSKTRPESICSVTPSTHDKTLGPGAEE
KRRSMRDDTMWQLYEWQQRQFYNKQSTLPRHSTLSSPKTMVNISDQTMHSIPTSPSHGSIAAYQGYSPQR
TYRSEVSSPIQRGDVTIDRRHRAHHPKHVYVPDRRSVPAGLTLQSVSPQSLQGKTLSQDEGRGTLYKYRP
EEVDIDAKLSRLCEQDKVVHALEEKLQQLHKEKYTLEQALLSASQEIEMHADNPAAIQTVVLQRDDLQNG
LLSTCRELSRATAELERAWREYDKLEYDVTVTRNQMQEQLDHLGEVQTESAGIQRAQIQKELWRIQDVME
GLSKHKQQRGTTEIGMIGSKPFSTVKYKNEGPDYRLYKSEPELTTVAEVDESNGEEKSEPVSEIETSVVK
GSHFPVGVVPPRAKSPTPESSTIASYVTLRKTKKMMDLRTERPRSAVEQLCLAESTRPRMTVEEQMERIR
RHQQACLREKKKGLNVIGASDQSPLQSPSNLRDNPFRTTQTRRRDDKELDTAIRENDVKPDHETPATEIV
QLKETEPQNVDFSKELKKTENISYEMLFEPEPNGVNSVEMMDKERNKDKMPEDVTFSPQDETQTANHKPE
EHPEENTKNSVDEQEETVISYESTPEVSRGNQTMAVKSLSPSPESSASPVPSTQPQLTEGSHFMCV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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