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Report for CCDS7590.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7590.1 Public Homo sapiens 10 ABLIM1 24 110 108 CCDS HistoryNCBI Gene:3983Re-query CCDS DB by CCDS ID:7590.1Re-query CCDS DB by GeneID:3983See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7590.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000533213.7 ENSP00000433629.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000533213.7Link to Ensembl Protein Viewer:ENSP00000433629.3Re-query CCDS DB by Nucleotide ID:ENST00000533213Re-query CCDS DB by Protein ID:ENSP00000433629
Original member Current member NCBI NM_002313.7 NP_002304.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002313.7Link to Protein Sequence:NP_002304.3Re-query CCDS DB by Nucleotide ID:NM_002313Re-query CCDS DB by Protein ID:NP_002304Link to BLAST:NP_002304.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_002304.3 778 O14639-1 778 100% 0 0

Chromosomal Locations for CCDS 7590.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 114436260 114436373 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114437844 114437924 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114439176 114439250 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114440082 114440089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114441017 114441077 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114441722 114441786 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114444029 114444134 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114445312 114445403 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114447880 114448020 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114451624 114451671 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114453379 114453483 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114465698 114465827 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114468181 114468216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114472977 114473132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114473879 114473956 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114487958 114488016 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114491791 114491878 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114545005 114545098 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114547650 114547776 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114571297 114571406 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114575416 114575599 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114601827 114601961 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 114657957 114658200 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2337 nt):
ATGCCTGCCTTCCTTGGTCTAAAGTGTCTGGGGAAATTGTGCAGCTCTGAGAAAAGCAAAGTCACCTCAT
CTGAGAGAACCAGTGCCAGGGGCTCGAACAGAAAGAGACTGATTGTTGAGGACCGGAGGGTCTCTGGGAC
CTCCTTCACCGCTCATAGGCGTGCCACTATCACTCATTTGCTGTATCTCTGTCCCAAGGACTACTGCCCA
CGTGGGCGTGTATGTAACAGCGTTGATCCTTTTGTGGCCCACCCTCAGGACCCTCACCACCCATCAGAGA
AGCCTGTCATTCACTGCCATAAATGTGGGGAGCCTTGCAAGGGTGAAGTGCTTCGGGTCCAGACCAAACA
TTTCCACATCAAGTGTTTCACCTGCAAAGTGTGTGGCTGTGACCTGGCACAAGGGGGCTTCTTCATAAAG
AACGGAGAGTATCTCTGCACCCTGGACTACCAGCGGATGTACGGGACACGCTGCCATGGCTGTGGGGAGT
TCGTGGAGGGCGAAGTGGTGACTGCTCTGGGCAAGACCTACCATCCCAATTGCTTTGCTTGTACTATCTG
CAAGCGCCCGTTTCCACCCGGAGACCGAGTCACATTCAATGGGAGAGACTGCCTTTGTCAACTCTGTGCA
CAGCCGATGTCGTCCAGTCCGAAAGAAACCACCTTCTCCAGCAATTGTGCCGGCTGCGGAAGAGATATCA
AGAATGGGCAGGCGCTGCTGGCGCTGGATAAGCAGTGGCACTTGGGGTGCTTTAAATGCAAGTCCTGCGG
GAAGGTCCTCACCGGGGAGTACATCAGCAAGGATGGTGCTCCGTACTGTGAAAAGGACTACCAGGGACTC
TTTGGGGTGAAATGTGAGGCGTGTCACCAGTTTATCACAGGGAAAGTCCTGGAGGCAGGTGACAAACATT
ACCACCCCAGCTGTGCACGATGCAGCAGATGCAACCAGATGTTCACAGAAGGAGAGGAAATGTATCTTCA
AGGCTCCACCGTTTGGCATCCCGACTGTAAGCAATCTACGAAGACCGAGGAAAAGCTGCGGCCTACCAGG
ACATCCTCGGAAAGTATTTATTCTAGGCCAGGCTCCAGTATTCCTGGCTCACCAGGTCATACTATCTATG
CAAAAGTAGACAATGAGATCCTGGATTACAAGGATTTAGCAGCCATTCCGAAGGTCAAGGCAATTTATGA
CATTGAACGTCCAGATCTTATTACCTATGAGCCTTTCTACACTTCGGGCTATGATGACAAACAGGAGAGA
CAGAGCCTTGGAGAGTCTCCGAGGACTTTGTCTCCTACTCCATCAGCAGAAGGGTACCAGGATGTTCGGG
ATCGGATGATCCATCGGTCCACGAGCCAGGGCTCCATCAACTCCCCTGTGTACAGCCGCCACAGCTACAC
TCCAACCACGTCCCGCTCTCCCCAGCATTTCCACAGACCTGGCAATGAGCCGTCCAGCGGCCGGAACTCC
CCTCTCCCTTACCGGCCAGACAGCCGCCCTCTAACTCCAACTTACGCTCAGGCCCCTAAACATTTCCATG
TTCCAGATCAAGGAATCAACATTTACCGAAAGCCACCCATCTACAAACAGCATGCTGCCTTGGCAGCCCA
GAGCAAGTCCTCAGAAGATATCATCAAGTTTTCCAAGTTCCCAGCAGCCCAGGCACCAGACCCCAGCGAG
ACACCAAAGATTGAGACGGACCACTGGCCTGGTCCCCCCTCATTTGCTGTCGTAGGACCTGACATGAAAC
GCAGATCTAGTGGCAGAGAGGAAGATGATGAGGAACTTCTGAGACGTCGGCAGCTTCAAGAAGAGCAATT
AATGAAGCTTAACTCAGGCCTGGGACAGTTGATCTTGAAAGAAGAGATGGAGAAAGAGAGCCGGGAAAGG
TCATCTCTGTTAGCCAGTCGCTACGATTCTCCCATCAACTCAGCTTCACATATTCCATCATCTAAAACTG
CATCTCTCCCTGGCTATGGAAGAAATGGGCTTCACCGGCCTGTTTCTACCGACTTCGCTCAGTATAACAG
CTATGGGGATGTCAGCGGGGGAGTGCGAGATTACCAGACACTCCCAGATGGCCACATGCCTGCAATGAGA
ATGGACCGAGGAGTGTCTATGCCCAACATGTTGGAACCAAAGATATTTCCATATGAAATGCTCATGGTGA
CCAACAGAGGGCGAAACAAAATCCTCAGAGAGGTGGACAGAACCAGGCTGGAGCGCCACTTAGCCCCTGA
AGTGTTTCGGGAAATCTTTGGAATGTCCATACAGGAGTTTGACAGGTTACCTCTTTGGAGACGCAACGAC
ATGAAGAAAAAAGCAAAACTCTTCTAA

Translation (778 aa):
MPAFLGLKCLGKLCSSEKSKVTSSERTSARGSNRKRLIVEDRRVSGTSFTAHRRATITHLLYLCPKDYCP
RGRVCNSVDPFVAHPQDPHHPSEKPVIHCHKCGEPCKGEVLRVQTKHFHIKCFTCKVCGCDLAQGGFFIK
NGEYLCTLDYQRMYGTRCHGCGEFVEGEVVTALGKTYHPNCFACTICKRPFPPGDRVTFNGRDCLCQLCA
QPMSSSPKETTFSSNCAGCGRDIKNGQALLALDKQWHLGCFKCKSCGKVLTGEYISKDGAPYCEKDYQGL
FGVKCEACHQFITGKVLEAGDKHYHPSCARCSRCNQMFTEGEEMYLQGSTVWHPDCKQSTKTEEKLRPTR
TSSESIYSRPGSSIPGSPGHTIYAKVDNEILDYKDLAAIPKVKAIYDIERPDLITYEPFYTSGYDDKQER
QSLGESPRTLSPTPSAEGYQDVRDRMIHRSTSQGSINSPVYSRHSYTPTTSRSPQHFHRPGNEPSSGRNS
PLPYRPDSRPLTPTYAQAPKHFHVPDQGINIYRKPPIYKQHAALAAQSKSSEDIIKFSKFPAAQAPDPSE
TPKIETDHWPGPPSFAVVGPDMKRRSSGREEDDEELLRRRQLQEEQLMKLNSGLGQLILKEEMEKESRER
SSLLASRYDSPINSASHIPSSKTASLPGYGRNGLHRPVSTDFAQYNSYGDVSGGVRDYQTLPDGHMPAMR
MDRGVSMPNMLEPKIFPYEMLMVTNRGRNKILREVDRTRLERHLAPEVFREIFGMSIQEFDRLPLWRRND
MKKKAKLF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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