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Report for CCDS327.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
327.1 Public Homo sapiens 1 GMEB1 24 110 108 CCDS HistoryNCBI Gene:10691Re-query CCDS DB by CCDS ID:327.1Re-query CCDS DB by GeneID:10691See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 327.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000294409.2 ENSP00000294409.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000294409.2Link to Ensembl Protein Viewer:ENSP00000294409.2Re-query CCDS DB by Nucleotide ID:ENST00000294409Re-query CCDS DB by Protein ID:ENSP00000294409
Original member Current member NCBI NM_006582.4 NP_006573.2 Accepted alive Link to Nucleotide Sequence:NM_006582.4Link to Protein Sequence:NP_006573.2Re-query CCDS DB by Nucleotide ID:NM_006582Re-query CCDS DB by Protein ID:NP_006573Link to BLAST:NP_006573.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006573.2 573 Q9Y692-1 573 100% 0 0

Chromosomal Locations for CCDS 327.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 28683613 28683740 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28690074 28690186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28691585 28691709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28692942 28693045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28696927 28697084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28702438 28702569 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28704192 28704329 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28710520 28710642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 28714073 28714773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1722 nt):
ATGGCTAATGCAGAAGTGAGTGTCCCAGTGGGGGATGTGGTTGTGGTACCTACTGAAGGAAATGAAGGGG
AGAATCCTGAAGACACTAAAACCCAAGTGATTTTGCAGTTACAGCCTGTGCAACAAGGTTTGTTTATCGA
TGGACACTTTTACAACAGGATTTATGAAGCTGGGTCGGAGAACAACACGGCAGTTGTAGCAGTAGAAACT
CACACGATACACAAAATTGAAGAAGGGATTGATACAGGCACTATAGAAGCAAATGAGGATATGGAAATTG
CTTACCCCATAACTTGTGGGGAGAGCAAAGCCATCCTCCTCTGGAAGAAGTTTGTATGTCCAGGAATAAA
CGTGAAGTGTGTCAAGTTCAATGATCAGTTGATCAGCCCCAAGCACTTTGTTCATCTGGCTGGCAAGTCC
ACTCTGAAGGACTGGAAGAGAGCTATTCGTCTGGGTGGGATCATGCTCAGGAAAATGATGGACTCCGGAC
AGATTGATTTTTACCAACATGACAAAGTTTGCTCCAATACCTGCAGAAGCACCAAATTTGATCTTCTGAT
CAGCAGTGCAAGAGCTCCAGTGCCAGGACAGCAGACAAGTGTGGTGCAGACACCCACTTCGGCTGATGGT
AGCATCACGCAGATTGCCATCTCAGAAGAGAGCATGGAAGAGGCAGGGCTGGAATGGAACTCAGCTCTCA
CCGCTGCTGTCACCATGGCCACGGAGGAGGGTGTAAAGAAAGACTCAGAGGAAATTTCAGAGGACACTTT
GATGTTCTGGAAAGGAATAGCTGATGTAGGGCTGATGGAAGAGGTTGTCTGCAATATACAGAAGGAAATA
GAGGAGCTACTCAGGGGAGTTCAGCAGCGGCTCATCCAGGCTCCCTTCCAAGTCACAGATGCTGCTGTTC
TCAACAATGTAGCACACACATTTGGCCTAATGGACACAGTCAAGAAGGTTTTAGACAACAGAAGGAACCA
AGTAGAGCAGGGAGAAGAACAGTTTCTCTATACTCTGACAGACTTGGAACGCCAGTTGGAGGAGCAGAAG
AAGCAAGGCCAGGATCACAGGCTGAAATCTCAGACAGTTCAAAATGTGGTACTGATGCCTGTGAGCACTC
CTAAGCCTCCAAAAAGGCCCCGGCTCCAGCGGCCAGCCTCCACCACTGTCTTGAGCCCTTCTCCTCCTGT
CCAGCAGCCTCAGTTCACAGTCATCTCACCCATCACCATCACCCCAGTGGGTCAGTCATTTTCCATGGGC
AATATTCCAGTGGCCACCCTCAGCCAGGGCTCCAGTCCTGTGACTGTCCACACACTGCCTTCTGGCCCTC
AGCTCTTCCGCTATGCCACAGTGGTCTCCTCTGCCAAGAGCAGCTCACCAGACACAGTGACCATCCACCC
TTCATCTAGCTTGGCGCTGCTGAGCTCTACTGCCATGCAGGATGGGAGTACACTGGGCAACATGACCACC
ATGGTTAGCCCTGTGGAATTGGTGGCCATGGAGTCCGGCCTAACCTCGGCAATTCAGGCTGTTGAAAGCA
CCTCAGAGGATGGGCAGACCATCATTGAGATTGATCCAGCCCCGGACCCAGAAGCTGAAGATACTGAGGG
CAAAGCAGTCATCTTGGAGACAGAGCTGAGGACTGAGGAGAAAGTTGTGGCTGAGATGGAAGAACACCAG
CATCAAGTTCACAATGTGGAGATTGTGGTCTTAGAGGATTAA

Translation (573 aa):
MANAEVSVPVGDVVVVPTEGNEGENPEDTKTQVILQLQPVQQGLFIDGHFYNRIYEAGSENNTAVVAVET
HTIHKIEEGIDTGTIEANEDMEIAYPITCGESKAILLWKKFVCPGINVKCVKFNDQLISPKHFVHLAGKS
TLKDWKRAIRLGGIMLRKMMDSGQIDFYQHDKVCSNTCRSTKFDLLISSARAPVPGQQTSVVQTPTSADG
SITQIAISEESMEEAGLEWNSALTAAVTMATEEGVKKDSEEISEDTLMFWKGIADVGLMEEVVCNIQKEI
EELLRGVQQRLIQAPFQVTDAAVLNNVAHTFGLMDTVKKVLDNRRNQVEQGEEQFLYTLTDLERQLEEQK
KQGQDHRLKSQTVQNVVLMPVSTPKPPKRPRLQRPASTTVLSPSPPVQQPQFTVISPITITPVGQSFSMG
NIPVATLSQGSSPVTVHTLPSGPQLFRYATVVSSAKSSSPDTVTIHPSSSLALLSSTAMQDGSTLGNMTT
MVSPVELVAMESGLTSAIQAVESTSEDGQTIIEIDPAPDPEAEDTEGKAVILETELRTEEKVVAEMEEHQ
HQVHNVEIVVLED


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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