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Report for CCDS8785.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8785.1 Public Homo sapiens 12 DNAJC22 24 110 108 CCDS HistoryNCBI Gene:79962Re-query CCDS DB by CCDS ID:8785.1Re-query CCDS DB by GeneID:79962See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8785.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395069.3 ENSP00000378508.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000395069.3Link to Ensembl Protein Viewer:ENSP00000378508.2Re-query CCDS DB by Nucleotide ID:ENST00000395069Re-query CCDS DB by Protein ID:ENSP00000378508
Original member Current member EBI ENST00000549441.7 ENSP00000446830.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000549441.7Link to Ensembl Protein Viewer:ENSP00000446830.1Re-query CCDS DB by Nucleotide ID:ENST00000549441Re-query CCDS DB by Protein ID:ENSP00000446830
Original member Current member EBI ENST00000647553.1 ENSP00000498036.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000647553.1Link to Ensembl Protein Viewer:ENSP00000498036.1Re-query CCDS DB by Nucleotide ID:ENST00000647553Re-query CCDS DB by Protein ID:ENSP00000498036
Original member Current member NCBI NM_001304944.2 NP_001291873.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001304944.2Link to Protein Sequence:NP_001291873.1Re-query CCDS DB by Nucleotide ID:NM_001304944Re-query CCDS DB by Protein ID:NP_001291873Link to BLAST:NP_001291873.1
Original member Current member NCBI NM_024902.4 NP_079178.2 Accepted alive Link to Nucleotide Sequence:NM_024902.4Link to Protein Sequence:NP_079178.2Re-query CCDS DB by Nucleotide ID:NM_024902Re-query CCDS DB by Protein ID:NP_079178Link to BLAST:NP_079178.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001291873.1 341 Q8N4W6 341 100% 0 0
NP_079178.2 341 Q8N4W6 341 100% 0 0

Chromosomal Locations for CCDS 8785.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 49348873 49349712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 49351317 49351502 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGGCCAAGGGGCTCCTGGTGACCTATGCCCTCTGGGCTGTGGGGGGCCCTGCTGGGCTCCACCACCTGT
ACCTGGGAAGGGACAGCCACGCCCTGCTCTGGATGCTGACCCTGGGGGGAGGTGGGCTGGGCTGGCTCTG
GGAGTTCTGGAAGCTCCCAAGCTTTGTAGCTCAGGCCAACAGAGCCCAGGGACAGAGGCAGAGCCCCAGA
GGGGTGACACCCCCTCTGAGTCCCATTCGCTTTGCTGCCCAGGTGATAGTTGGCATCTATTTTGGCCTTG
TGGCACTGATTAGCCTTTCTTCCATGGTCAACTTCTATATTGTGGCCCTCCCACTGGCAGTTGGCTTAGG
GGTCTTGCTGGTGGCTGCTGTTGGCAACCAGACCTCAGACTTTAAGAACACTCTGGGGTCAGCATTTCTC
ACTTCACCTATCTTCTATGGCCGCCCCATAGCCATACTGCCCATTAGCGTGGCCGCCAGCATTACAGCTC
AGAGGCATCGCCGCTACAAAGCTTTGGTGGCATCAGAGCCGCTCAGTGTGCGGCTCTATCGTCTGGGCTT
GGCTTACCTTGCTTTCACAGGCCCACTGGCATACAGTGCCCTCTGCAACACAGCTGCCACCCTCAGCTAT
GTGGCAGAAACCTTTGGCTCCTTCTTGAATTGGTTCAGCTTCTTCCCCCTTCTTGGCCGCCTCATGGAGT
TTGTCCTCCTTCTGCCTTACCGGATCTGGAGGCTACTGATGGGGGAGACTGGCTTCAACAGCAGCTGCTT
TCAGGAGTGGGCGAAGCTCTATGAGTTTGTTCACAGTTTTCAGGATGAGAAGCGTCAGCTGGCTTACCAG
GTTTTGGGCCTCTCAGAAGGGGCAACAAATGAAGAAATACATCGGAGTTACCAGGAGCTAGTGAAGGTCT
GGCACCCAGACCACAACCTGGACCAGACAGAGGAGGCACAGAGGCACTTCCTGGAGATCCAGGCTGCGTA
TGAAGTCCTGAGTCAACCCAGGAAGCCCTGGGGATCCCGGAGGTGA

Translation (341 aa):
MAKGLLVTYALWAVGGPAGLHHLYLGRDSHALLWMLTLGGGGLGWLWEFWKLPSFVAQANRAQGQRQSPR
GVTPPLSPIRFAAQVIVGIYFGLVALISLSSMVNFYIVALPLAVGLGVLLVAAVGNQTSDFKNTLGSAFL
TSPIFYGRPIAILPISVAASITAQRHRRYKALVASEPLSVRLYRLGLAYLAFTGPLAYSALCNTAATLSY
VAETFGSFLNWFSFFPLLGRLMEFVLLLPYRIWRLLMGETGFNSSCFQEWAKLYEFVHSFQDEKRQLAYQ
VLGLSEGATNEEIHRSYQELVKVWHPDHNLDQTEEAQRHFLEIQAAYEVLSQPRKPWGSRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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