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Report for CCDS13893.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
13893.1 Public Homo sapiens 22 PIK3IP1 24 110 108 CCDS HistoryNCBI Gene:113791Re-query CCDS DB by CCDS ID:13893.1Re-query CCDS DB by GeneID:113791See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 13893.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000215912.10 ENSP00000215912.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000215912.10Link to Ensembl Protein Viewer:ENSP00000215912.4Re-query CCDS DB by Nucleotide ID:ENST00000215912Re-query CCDS DB by Protein ID:ENSP00000215912
Original member Current member NCBI NM_052880.5 NP_443112.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_052880.5Link to Protein Sequence:NP_443112.2Re-query CCDS DB by Nucleotide ID:NM_052880Re-query CCDS DB by Protein ID:NP_443112Link to BLAST:NP_443112.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_443112.2 263 Q96FE7-1 263 100% 0 0

Chromosomal Locations for CCDS 13893.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 31283084 31283288 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31289315 31289393 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31289499 31289699 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31290965 31291084 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31291180 31291296 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 31292275 31292344 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (792 nt):
ATGCTGTTGGCCTGGGTACAAGCATTCCTCGTCAGCAACATGCTCCTAGCAGAAGCCTATGGATCTGGAG
GCTGTTTCTGGGACAACGGCCACCTGTACCGGGAGGACCAGACCTCCCCCGCGCCGGGCCTCCGCTGCCT
CAACTGGCTGGACGCGCAGAGCGGGCTGGCCTCGGCCCCCGTGTCGGGGGCCGGCAATCACAGTTACTGC
CGAAACCCGGACGAGGACCCGCGCGGGCCCTGGTGCTACGTCAGTGGCGAGGCCGGCGTCCCTGAGAAAC
GGCCTTGCGAGGACCTGCGCTGTCCAGAGACCACCTCCCAGGCCCTGCCAGCCTTCACGACAGAAATCCA
GGAAGCGTCTGAAGGGCCAGGTGCAGATGAGGTGCAGGTGTTCGCTCCTGCCAACGCCCTGCCCGCTCGG
AGTGAGGCGGCAGCTGTGCAGCCAGTGATTGGGATCAGCCAGCGGGTGCGGATGAACTCCAAGGAGAAAA
AGGACCTGGGAACTCTGGGCTACGTGCTGGGCATTACCATGATGGTGATCATCATTGCCATCGGAGCTGG
CATCATCTTGGGCTACTCCTACAAGAGGGGGAAGGATTTGAAAGAACAGCATGATCAGAAAGTATGTGAG
AGGGAGATGCAGCGAATCACTCTGCCCTTGTCTGCCTTCACCAACCCCACCTGTGAGATTGTGGATGAGA
AGACTGTCGTGGTCCACACCAGCCAGACTCCAGTTGACCCTCAGGAGGGCACCACCCCCCTTATGGGCCA
GGCCGGGACTCCTGGGGCCTGA

Translation (263 aa):
MLLAWVQAFLVSNMLLAEAYGSGGCFWDNGHLYREDQTSPAPGLRCLNWLDAQSGLASAPVSGAGNHSYC
RNPDEDPRGPWCYVSGEAGVPEKRPCEDLRCPETTSQALPAFTTEIQEASEGPGADEVQVFAPANALPAR
SEAAAVQPVIGISQRVRMNSKEKKDLGTLGYVLGITMMVIIIAIGAGIILGYSYKRGKDLKEQHDQKVCE
REMQRITLPLSAFTNPTCEIVDEKTVVVHTSQTPVDPQEGTTPLMGQAGTPGA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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