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Report for CCDS12821.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12821.1 Public Homo sapiens 19 KLK12 24 110 108 CCDS HistoryNCBI Gene:43849Re-query CCDS DB by CCDS ID:12821.1Re-query CCDS DB by GeneID:43849See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12821.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000319590.8 ENSP00000324181.4 Accepted alive Link to Ensembl Transcript Viewer:ENST00000319590.8Link to Ensembl Protein Viewer:ENSP00000324181.4Re-query CCDS DB by Nucleotide ID:ENST00000319590Re-query CCDS DB by Protein ID:ENSP00000324181
Original member Current member EBI ENST00000525263.5 ENSP00000436458.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000525263.5Link to Ensembl Protein Viewer:ENSP00000436458.1Re-query CCDS DB by Nucleotide ID:ENST00000525263Re-query CCDS DB by Protein ID:ENSP00000436458
Original member Current member EBI ENST00000684732.1 ENSP00000508282.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000684732.1Link to Ensembl Protein Viewer:ENSP00000508282.1Re-query CCDS DB by Nucleotide ID:ENST00000684732Re-query CCDS DB by Protein ID:ENSP00000508282
Original member Current member NCBI NM_001370125.1 NP_001357054.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001370125.1Link to Protein Sequence:NP_001357054.1Re-query CCDS DB by Nucleotide ID:NM_001370125Re-query CCDS DB by Protein ID:NP_001357054Link to BLAST:NP_001357054.1
Original member Current member NCBI NM_145894.2 NP_665901.1 Accepted alive Link to Nucleotide Sequence:NM_145894.2Link to Protein Sequence:NP_665901.1Re-query CCDS DB by Nucleotide ID:NM_145894Re-query CCDS DB by Protein ID:NP_665901Link to BLAST:NP_665901.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001357054.1 248 Q9UKR0-1 248 100% 0 0
NP_665901.1 248 Q9UKR0-1 248 100% 0 0

Chromosomal Locations for CCDS 12821.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 51029302 51029457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51030788 51030921 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51031876 51032135 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51033980 51034139 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 51034585 51034621 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (747 nt):
ATGGGGCTCAGCATCTTTTTGCTCCTGTGTGTTCTTGGGCTCAGCCAGGCAGCCACACCGAAGATTTTCA
ATGGCACTGAGTGTGGGCGTAACTCACAGCCGTGGCAGGTGGGGCTGTTTGAGGGCACCAGCCTGCGCTG
CGGGGGTGTCCTTATTGACCACAGGTGGGTCCTCACAGCGGCTCACTGCAGCGGCAGCAGGTACTGGGTG
CGCCTGGGGGAACACAGCCTCAGCCAGCTCGACTGGACCGAGCAGATCCGGCACAGCGGCTTCTCTGTGA
CCCATCCCGGCTACCTGGGAGCCTCGACGAGCCACGAGCACGACCTCCGGCTGCTGCGGCTGCGCCTGCC
CGTCCGCGTAACCAGCAGCGTTCAACCCCTGCCCCTGCCCAATGACTGTGCAACCGCTGGCACCGAGTGC
CACGTCTCAGGCTGGGGCATCACCAACCACCCACGGAACCCATTCCCGGATCTGCTCCAGTGCCTCAACC
TCTCCATCGTCTCCCATGCCACCTGCCATGGTGTGTATCCCGGGAGAATCACGAGCAACATGGTGTGTGC
AGGCGGCGTCCCGGGGCAGGATGCCTGCCAGGGTGATTCTGGGGGCCCCCTGGTGTGTGGGGGAGTCCTT
CAAGGTCTGGTGTCCTGGGGGTCTGTGGGGCCCTGTGGACAAGATGGCATCCCTGGAGTCTACACCTATA
TTTGCAAGTATGTGGACTGGATCCGGATGATCATGAGGAACAACTGA

Translation (248 aa):
MGLSIFLLLCVLGLSQAATPKIFNGTECGRNSQPWQVGLFEGTSLRCGGVLIDHRWVLTAAHCSGSRYWV
RLGEHSLSQLDWTEQIRHSGFSVTHPGYLGASTSHEHDLRLLRLRLPVRVTSSVQPLPLPNDCATAGTEC
HVSGWGITNHPRNPFPDLLQCLNLSIVSHATCHGVYPGRITSNMVCAGGVPGQDACQGDSGGPLVCGGVL
QGLVSWGSVGPCGQDGIPGVYTYICKYVDWIRMIMRNN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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