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Report for CCDS89588.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
89588.1 Public Mus musculus 2 Zfp64 23 108 98 CCDS HistoryNCBI Gene:22722Re-query CCDS DB by CCDS ID:89588.1Re-query CCDS DB by GeneID:22722See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 89588.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000109162.8 ENSMUSP00000104790.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000109162.8Link to Ensembl Protein Viewer:ENSMUSP00000104790.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000109162Re-query CCDS DB by Protein ID:ENSMUSP00000104790
Original member Current member NCBI NM_001369059.1 NP_001355988.1 Accepted alive Link to Nucleotide Sequence:NM_001369059.1Link to Protein Sequence:NP_001355988.1Re-query CCDS DB by Nucleotide ID:NM_001369059Re-query CCDS DB by Protein ID:NP_001355988Link to BLAST:NP_001355988.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001355988.1 643 Q99KE8-1 643 99.5334% 0 3

Chromosomal Locations for CCDS 89588.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 2 (NC_000068.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 168893824 168894533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168899785 168900036 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168906084 168906146 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168906840 168906989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168935211 168935462 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168939971 168940033 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168940737 168940898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168951545 168951778 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 168955119 168955164 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1932 nt):
ATGAACGCGAGCGTGGAAGGAGACACCTTTTCTGGATCGATGCAAATCCCAGGAGGCACCACGGTGCTGG
TGGAGCTGGCACCGGACATCCACATCTGCGGCCTCTGTAAGCAGCACTTCAGCAATCTGGATGCCTTTGT
GGCCCACAAACAGAGCGGCTGCCAGCTGACTACCACGCCGGTGACAGCCCCCAGCACGGTCCAGTTTGTG
GCAGAGGAGACAGAGCCTGCCACCCAGACCACCACAACGACCATCAGTTCAGAGACTCAGACTATCACAG
TTTCAGCTCCAGAGTTCGTCTTTGAACATGGCTACCAAACTTACCTGCCCACGGAGAGCACTGACAACCA
GACAGCCACCGTGATCTCTCTCCCCACCAAGTCACGCACCAAAAAGCCCACAGCACCCCCTGCTCAGAAG
AGACTCGGCTGCTGCTATCCAGGTTGCCAGTTCAAGACCGCCTATGGCATGAAGGACATGGAGCGACACC
TGAAGATCCACACCGGTGACAAACCCCACAAGTGTGAGGTGTGCGGGAAGTGCTTCAGCCGGAAGGACAA
GCTGAAGACGCACATGCGCTGCCACACGGGCGTCAAGCCCTACAAGTGCAAGACGTGCGACTACGCGGCG
GCGGACAGCAGCAGCCTTAACAAGCACCTGCGCATCCACTCGGACGAGCGACCCTTCAAGTGCCAGATCT
GTCCCTACGCCAGTCGCAACTCCAGCCAGCTCACCGTGCACCTGCGCTCGCACACGGCCTCTGTGCTCGA
AAACGATGTCCAGAAACCGGCGGGCCTCCCTGCTGAAGAAAGCGATGCCCAGCAGGCCCCTGCAGTCACT
CTGTCCTTGGAAGCAAAGGAGAGAACGGCCACCCTTGGAGAAAGGACCTTTAACTGCCGCTATCCAGGTT
GTCATTTCAAAACCGTTCATGGCATGAAAGATTTGGACCGCCATCTAAGAATCCACACAGGCGACAAGCC
ACACAAGTGTGAGTTCTGTGATAAGTGCTTCAGCCGGAAGGACAACCTGACCATGCACATGCGCTGCCAC
ACGAGTGTGAAGCCACACAAGTGCCACCTGTGCGACTACGCGGCCGTGGACAGCAGCAGCCTCAAGAAGC
ACCTTCGCATCCACTCGGACGAGCGGCCCTACAAGTGCCAACTCTGTCCCTACGCCAGCCGCAACTCCAG
CCAGCTCACAGTGCACCTGCGCTCGCACACGGGGGACACCCCCTTCCAGTGCTGGCTCTGTAGCGCCAAA
TTCAAAATCAGCTCGGACTTGAAGCGGCATATGATCGTGCATTCAGGGGAGAAGCCTTTCAAATGCGAGT
TCTGTGACGTCCGTTGCACCATGAAGGCGAACCTCAAGTCCCACATCCGTATCAAGCACACCTTCAAGTG
TCTGCACTGTGCCTTCCAGGGCCGGGACCGGGCAGACCTGCTGGAGCACAGTCGCCTGCATCAGGCCGAC
CACCCGGAGAAATGTCCCGAGTGTAGCTACTCCTGCTCCAACCCAGCCGCCCTGCGCGTACACAGCAGAG
TCCACTGCACGGACCGGCCCTTCAAATGTGACTTCTGCAGCTTTGATACAAAGCGGCCCAGCAGCCTGGC
CAAACACATCGATAAGGTGCACAGAGAAGGCGCCAAGACTGAGAACAGGGCCCCTCCGGGCAAGGATGGT
CCCGGGGAGAGCGGTCCCAACCACGTGCCCAACGTCAGCACCCAGAGAGCCTTCGGATGCGACAAGTGCG
GTGCCTCCTTTGTCCGGGATGACTCTCTGAGGTGCCATCGGAAGCAGCATAGTGACTGGGGCGAGAACAA
GAACTCAAACCTGGTCACTTTCCCCTCAGAAGGCATTGCTTCCGGACAGGTTGGCCCCCTGGTCTCCGTG
GGGCAGCTGGAGAGCACTCTGGAGCCCAGCCATGACCTCTAG

Translation (643 aa):
MNASVEGDTFSGSMQIPGGTTVLVELAPDIHICGLCKQHFSNLDAFVAHKQSGCQLTTTPVTAPSTVQFV
AEETEPATQTTTTTISSETQTITVSAPEFVFEHGYQTYLPTESTDNQTATVISLPTKSRTKKPTAPPAQK
RLGCCYPGCQFKTAYGMKDMERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAA
ADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTASVLENDVQKPAGLPAEESDAQQAPAVT
LSLEAKERTATLGERTFNCRYPGCHFKTVHGMKDLDRHLRIHTGDKPHKCEFCDKCFSRKDNLTMHMRCH
TSVKPHKCHLCDYAAVDSSSLKKHLRIHSDERPYKCQLCPYASRNSSQLTVHLRSHTGDTPFQCWLCSAK
FKISSDLKRHMIVHSGEKPFKCEFCDVRCTMKANLKSHIRIKHTFKCLHCAFQGRDRADLLEHSRLHQAD
HPEKCPECSYSCSNPAALRVHSRVHCTDRPFKCDFCSFDTKRPSSLAKHIDKVHREGAKTENRAPPGKDG
PGESGPNHVPNVSTQRAFGCDKCGASFVRDDSLRCHRKQHSDWGENKNSNLVTFPSEGIASGQVGPLVSV
GQLESTLEPSHDL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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