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Report for CCDS7283.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7283.1 Public Homo sapiens 10 DDX50 24 110 108 CCDS HistoryNCBI Gene:79009Re-query CCDS DB by CCDS ID:7283.1Re-query CCDS DB by GeneID:79009See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7283.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000373585.8 ENSP00000362687.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000373585.8Link to Ensembl Protein Viewer:ENSP00000362687.3Re-query CCDS DB by Nucleotide ID:ENST00000373585Re-query CCDS DB by Protein ID:ENSP00000362687
Original member Current member NCBI NM_024045.2 NP_076950.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024045.2Link to Protein Sequence:NP_076950.1Re-query CCDS DB by Nucleotide ID:NM_024045Re-query CCDS DB by Protein ID:NP_076950Link to BLAST:NP_076950.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_076950.1 737 Q9BQ39 737 100% 0 0

Chromosomal Locations for CCDS 7283.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 10 (NC_000010.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 68901385 68901471 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68906711 68907007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68910307 68910382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68911068 68911246 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68913162 68913279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68913391 68913576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68914059 68914204 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68919832 68919981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68934199 68934360 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68934799 68934918 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68936006 68936079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68936936 68937095 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68941060 68941194 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68943213 68943257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10
10 68946352 68946630 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2214 nt):
ATGCCTGGGAAACTCCTCTGGGGGGACATTATGGAGCTGGAAGCACCCTTGGAGGAGTCCGAGAGCCAGA
AGAAGGAGAGGCAAAAGAGTGACAGAAGGAAGTCAAGGCACCATTATGACTCGGATGAGAAATCAGAAAC
AAGAGAAAATGGTGTTACAGATGACCTGGATGCTCCCAAGGCCAAAAAATCTAAAATGAAAGAGAAGCTA
AATGGAGACACTGAAGAAGGATTTAATAGACTTTCAGATGAATTCTCCAAATCTCATAAGTCAAGAAGAA
AAGATCTACCAAATGGAGATATAGATGAATATGAAAAAAAATCAAAGCGAGTATCATCTTTAGATACTTC
TACTCATAAATCAAGTGATAATAAACTAGAGGAGACCTTAACACGTGAACAGAAAGAAGGAGCCTTCTCC
AATTTTCCTATTTCTGAAGAGACTATAAAGCTTCTGAAAGGTCGAGGGGTAACATATCTCTTTCCTATTC
AAGTTAAGACCTTTGGTCCTGTATATGAAGGAAAAGATTTAATAGCTCAAGCACGGACAGGAACAGGAAA
GACATTCTCTTTTGCCATCCCCTTAATTGAAAGACTCCAAAGAAATCAAGAAACAATTAAAAAAAGCCGC
TCACCAAAGGTACTTGTTTTGGCTCCAACAAGGGAACTGGCAAACCAAGTAGCCAAAGACTTCAAAGATA
TAACTAGGAAACTCAGCGTGGCGTGTTTTTATGGTGGAACATCATATCAAAGCCAAATTAATCATATTCG
AAATGGTATTGACATCTTGGTTGGAACACCTGGTCGTATCAAAGACCATCTGCAGAGTGGCCGATTGGAT
CTTTCTAAACTGCGACATGTTGTGCTTGATGAAGTGGATCAGATGTTAGATTTAGGTTTCGCTGAACAAG
TTGAAGATATTATTCATGAATCCTACAAAACTGATTCTGAAGACAATCCTCAGACTTTACTTTTTTCTGC
AACTTGCCCACAGTGGGTATACAAAGTTGCAAAAAAATACATGAAATCCAGATATGAACAGGTTGACCTT
GTTGGAAAAATGACTCAAAAGGCTGCAACTACTGTGGAACATTTGGCCATCCAGTGTCATTGGTCTCAGA
GGCCAGCAGTTATTGGAGATGTCCTTCAAGTCTACAGTGGGTCTGAAGGGAGGGCTATTATTTTCTGTGA
GACCAAGAAGAATGTAACTGAAATGGCCATGAATCCACACATAAAACAGAATGCCCAGTGTTTACATGGG
GACATTGCACAGTCACAAAGAGAAATTACACTAAAAGGCTTCAGAGAAGGTAGTTTTAAAGTTTTGGTGG
CAACCAATGTGGCTGCCCGTGGTTTGGACATTCCTGAAGTTGACCTGGTGATTCAAAGTTCTCCTCCTCA
GGATGTTGAGTCCTATATCCATCGCTCTGGACGCACAGGTAGAGCTGGACGGACAGGGATTTGTATATGT
TTTTATCAACCAAGAGAAAGAGGTCAACTAAGATATGTGGAACAAAAAGCAGGAATTACTTTTAAACGTG
TAGGTGTTCCTTCTACAATGGATTTAGTTAAATCTAAAAGCATGGATGCCATCAGGTCTCTGGCTTCCGT
TTCTTACGCTGCTGTTGATTTTTTCCGACCATCAGCTCAGAGACTGATAGAAGAGAAAGGTGCAGTGGAT
GCATTGGCTGCAGCTTTAGCCCACATTTCTGGTGCATCAAGCTTTGAACCACGATCTTTGATCACCTCTG
ATAAGGGGTTTGTGACCATGACTCTGGAAAGCCTAGAGGAAATACAGGATGTCAGCTGTGCTTGGAAAGA
ACTTAACAGAAAGCTGAGTAGTAATGCAGTGTCTCAGATTACCAGAATGTGCCTCCTGAAAGGAAATATG
GGTGTTTGCTTTGATGTTCCTACAACTGAGTCAGAAAGGTTACAGGCAGAGTGGCATGATTCCGACTGGA
TACTCTCAGTGCCAGCCAAATTACCTGAAATTGAAGAATATTATGATGGAAACACATCTTCTAATTCCAG
ACAGAGGAGTGGCTGGTCAAGTGGTCGATCAGGCCGGTCAGGCCGGTCAGGTGGTCGATCTGGCGGCCGG
TCAGGTAGACAGAGTCGACAAGGAAGTCGCTCAGGAAGTCGACAAGATGGTAGAAGACGAAGTGGGAATA
GAAATCGATCAAGAAGTGGGGGCCACAAACGGAGTTTTGACTGA

Translation (737 aa):
MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYDSDEKSETRENGVTDDLDAPKAKKSKMKEKL
NGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTSTHKSSDNKLEETLTREQKEGAFS
NFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQARTGTGKTFSFAIPLIERLQRNQETIKKSR
SPKVLVLAPTRELANQVAKDFKDITRKLSVACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLD
LSKLRHVVLDEVDQMLDLGFAEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDL
VGKMTQKAATTVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG
DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTGRAGRTGICIC
FYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYAAVDFFRPSAQRLIEEKGAVD
ALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQDVSCAWKELNRKLSSNAVSQITRMCLLKGNM
GVCFDVPTTESERLQAEWHDSDWILSVPAKLPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGR
SGRQSRQGSRSGSRQDGRRRSGNRNRSRSGGHKRSFD


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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