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Report for CCDS4985.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
4985.1 Public Homo sapiens 6 IMPG1 24 110 108 CCDS HistoryNCBI Gene:3617Re-query CCDS DB by CCDS ID:4985.1Re-query CCDS DB by GeneID:3617See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 4985.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000369950.8 ENSP00000358966.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000369950.8Link to Ensembl Protein Viewer:ENSP00000358966.3Re-query CCDS DB by Nucleotide ID:ENST00000369950Re-query CCDS DB by Protein ID:ENSP00000358966
Original member Current member NCBI NM_001563.4 NP_001554.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001563.4Link to Protein Sequence:NP_001554.2Re-query CCDS DB by Nucleotide ID:NM_001563Re-query CCDS DB by Protein ID:NP_001554Link to BLAST:NP_001554.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001554.2 797 Q17R60-1 797 100% 0 0

Chromosomal Locations for CCDS 4985.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 75922089 75922166 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75923634 75923706 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75930953 75931151 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75947314 75947533 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 75950562 75951094 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76002918 76002996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76003874 76003950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76005287 76005534 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76007480 76007500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76011166 76011224 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76018718 76018858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76022116 76022219 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76025194 76025258 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76034315 76034343 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76034621 76034787 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76041893 76042126 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 76072422 76072488 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2394 nt):
ATGTATTTGGAAACTAGAAGAGCTATTTTTGTTTTTTGGATTTTTCTCCAAGTTCAAGGAACCAAAGATA
TCTCCATTAACATATACCATTCTGAAACTAAAGACATAGACAATCCCCCAAGAAATGAAACAACTGAAAG
TACTGAAAAAATGTACAAAATGTCAACTATGAGACGAATATTCGATTTGGCAAAGCATCGAACAAAAAGA
TCCGCATTTTTCCCAACGGGGGTTAAAGTCTGTCCACAGGAATCCATGAAACAGATTTTAGACAGTCTTC
AAGCTTATTATAGATTGAGAGTGTGTCAGGAAGCAGTATGGGAAGCATATCGGATCTTTCTGGATCGCAT
CCCTGACACAGGGGAATATCAGGACTGGGTCAGCATCTGCCAGCAGGAGACCTTCTGCCTCTTTGACATT
GGAAAAAACTTCAGCAATTCCCAGGAGCACCTGGATCTTCTCCAGCAGAGAATAAAACAGAGAAGTTTCC
CTGACAGAAAAGATGAAATATCTGCAGAGAAGACATTGGGAGAGCCTGGTGAAACCATTGTCATTTCAAC
AGATGTTGCCAACGTCTCACTTGGGCCTTTCCCTCTCACTCCTGATGACACCCTCCTCAATGAAATTCTC
GATAATACACTCAACGACACCAAGATGCCTACAACAGAAAGAGAAACAGAATTCGCTGTGTTGGAGGAGC
AGAGGGTGGAGCTCAGCGTCTCTCTGGTAAACCAGAAGTTCAAGGCAGAGCTCGCTGACTCCCAGTCCCC
ATATTACCAGGAGCTAGCAGGAAAGTCCCAACTTCAGATGCAAAAGATATTTAAGAAACTTCCAGGATTC
AAAAAAATCCATGTGTTAGGATTTAGACCAAAGAAAGAAAAAGATGGCTCAAGCTCCACAGAGATGCAAC
TTACGGCCATCTTTAAGAGACACAGTGCAGAAGCAAAAAGCCCTGCAAGTGACCTCCTGTCTTTTGATTC
CAACAAAATTGAAAGTGAGGAAGTCTATCATGGAACCATGGAGGAGGACAAGCAACCAGAAATCTATCTC
ACAGCTACAGACCTCAAAAGGCTGATCAGCAAAGCACTAGAGGAAGAACAATCTTTGGATGTGGGGACAA
TTCAGTTCACTGATGAAATTGCTGGATCACTGCCAGCCTTTGGTCCTGACACCCAATCAGAGCTGCCCAC
ATCTTTTGCTGTTATAACAGAGGATGCTACTTTGAGTCCAGAACTTCCTCCTGTTGAACCCCAGCTTGAG
ACAGTGGACGGAGCAGAGCATGGTCTACCTGACACTTCTTGGTCTCCACCTGCTATGGCCTCTACCTCCC
TGTCAGAAGCTCCACCTTTCTTTATGGCATCAAGCATCTTCTCTCTGACTGATCAAGGCACCACAGATAC
AATGGCCACTGACCAGACAATGCTAGTACCAGGGCTCACCATCCCCACCAGTGATTATTCTGCAATCAGC
CAACTGGCTCTGGGAATTTCACATCCACCTGCATCTTCAGATGACAGCCGATCAAGTGCAGGTGGCGAAG
ATATGGTCAGACACCTAGATGAAATGGATCTGTCTGACACTCCTGCCCCATCTGAGGTACCAGAGCTCAG
CGAATATGTTTCTGTCCCAGATCATTTCTTGGAGGATACCACTCCTGTCTCAGCTTTACAGTATATCACC
ACTAGTTCTATGACCATTGCCCCCAAGGGCCGAGAGCTGGTAGTGTTCTTCAGTCTGCGTGTTGCTAACA
TGGCCTTCTCCAACGACCTGTTCAACAAGAGCTCTCTGGAGTACCGAGCTCTGGAGCAACAATTCACACA
GCTGCTGGTTCCATATCTACGATCCAATCTTACAGGATTTAAGCAACTTGAAATACTTAACTTCAGAAAC
GGGAGTGTGATTGTGAATAGCAAAATGAAGTTTGCTAAGTCAGTGCCGTATAACCTCACCAAGGCTGTGC
ACGGGGTCTTGGAGGATTTTCGTTCTGCTGCAGCCCAACAACTCCATCTGGAAATAGACAGCTACTCTCT
CAACATTGAACCAGCTGATCAAGCAGATCCCTGCAAGTTCCTGGCCTGCGGCGAATTTGCCCAATGTGTA
AAGAACGAACGGACTGAGGAAGCGGAGTGTCGCTGCAAACCAGGATATGACAGCCAGGGGAGCCTGGACG
GTCTGGAACCAGGCCTCTGTGGCCCTGGCACAAAGGAATGCGAGGTCCTCCAGGGAAAGGGAGCTCCATG
CAGGTTGCCAGATCACTCTGAAAATCAAGCATACAAAACTAGTGTTAAAAAGTTCCAAAATCAACAAAAT
AACAAGGTAATCAGTAAAAGAAATTCTGAATTACTGACCGTAGAATATGAAGAATTTAACCATCAAGATT
GGGAAGGAAATTAA

Translation (797 aa):
MYLETRRAIFVFWIFLQVQGTKDISINIYHSETKDIDNPPRNETTESTEKMYKMSTMRRIFDLAKHRTKR
SAFFPTGVKVCPQESMKQILDSLQAYYRLRVCQEAVWEAYRIFLDRIPDTGEYQDWVSICQQETFCLFDI
GKNFSNSQEHLDLLQQRIKQRSFPDRKDEISAEKTLGEPGETIVISTDVANVSLGPFPLTPDDTLLNEIL
DNTLNDTKMPTTERETEFAVLEEQRVELSVSLVNQKFKAELADSQSPYYQELAGKSQLQMQKIFKKLPGF
KKIHVLGFRPKKEKDGSSSTEMQLTAIFKRHSAEAKSPASDLLSFDSNKIESEEVYHGTMEEDKQPEIYL
TATDLKRLISKALEEEQSLDVGTIQFTDEIAGSLPAFGPDTQSELPTSFAVITEDATLSPELPPVEPQLE
TVDGAEHGLPDTSWSPPAMASTSLSEAPPFFMASSIFSLTDQGTTDTMATDQTMLVPGLTIPTSDYSAIS
QLALGISHPPASSDDSRSSAGGEDMVRHLDEMDLSDTPAPSEVPELSEYVSVPDHFLEDTTPVSALQYIT
TSSMTIAPKGRELVVFFSLRVANMAFSNDLFNKSSLEYRALEQQFTQLLVPYLRSNLTGFKQLEILNFRN
GSVIVNSKMKFAKSVPYNLTKAVHGVLEDFRSAAAQQLHLEIDSYSLNIEPADQADPCKFLACGEFAQCV
KNERTEEAECRCKPGYDSQGSLDGLEPGLCGPGTKECEVLQGKGAPCRLPDHSENQAYKTSVKKFQNQQN
NKVISKRNSELLTVEYEEFNHQDWEGN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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