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Report for CCDS2732.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
2732.1 Public Homo sapiens 3 CCR9 24 110 108 CCDS HistoryNCBI Gene:10803Re-query CCDS DB by CCDS ID:2732.1Re-query CCDS DB by GeneID:10803See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 2732.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000357632.7 ENSP00000350256.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000357632.7Link to Ensembl Protein Viewer:ENSP00000350256.2Re-query CCDS DB by Nucleotide ID:ENST00000357632Re-query CCDS DB by Protein ID:ENSP00000350256
Original member Current member NCBI NM_001386447.1 NP_001373376.1 Accepted alive Link to Nucleotide Sequence:NM_001386447.1Link to Protein Sequence:NP_001373376.1Re-query CCDS DB by Nucleotide ID:NM_001386447Re-query CCDS DB by Protein ID:NP_001373376Link to BLAST:NP_001373376.1
Original member Current member NCBI NM_001386448.1 NP_001373377.1 Accepted alive Link to Nucleotide Sequence:NM_001386448.1Link to Protein Sequence:NP_001373377.1Re-query CCDS DB by Nucleotide ID:NM_001386448Re-query CCDS DB by Protein ID:NP_001373377Link to BLAST:NP_001373377.1
Original member Current member NCBI NM_031200.3 NP_112477.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_031200.3Link to Protein Sequence:NP_112477.1Re-query CCDS DB by Nucleotide ID:NM_031200Re-query CCDS DB by Protein ID:NP_112477Link to BLAST:NP_112477.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001373376.1 369 P51686-1 369 100% 0 0
NP_001373377.1 369 P51686-1 369 100% 0 0
NP_112477.1 369 P51686-1 369 100% 0 0

Chromosomal Locations for CCDS 2732.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 45894934 45894954 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 45900810 45901898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1110 nt):
ATGACACCCACAGACTTCACAAGCCCTATTCCTAACATGGCTGATGACTATGGCTCTGAATCCACATCTT
CC
ATGGAAGACTACGTTAACTTCAACTTCACTGACTTCTACTGTGAGAAAAACAATGTCAGGCAGTTTGC
G
AGCCATTTCCTCCCACCCTTGTACTGGCTCGTGTTCATCGTGGGTGCCTTGGGCAACAGTCTTGTTATC
CTT
GTCTACTGGTACTGCACAAGAGTGAAGACCATGACCGACATGTTCCTTTTGAATTTGGCAATTGCTG
AC
CTCCTCTTTCTTGTCACTCTTCCCTTCTGGGCCATTGCTGCTGCTGACCAGTGGAAGTTCCAGACCTT
C
ATGTGCAAGGTGGTCAACAGCATGTACAAGATGAACTTCTACAGCTGTGTGTTGCTGATCATGTGCATC
AGC
GTGGACAGGTACATTGCCATTGCCCAGGCCATGAGAGCACATACTTGGAGGGAGAAAAGGCTTTTGT
AC
AGCAAAATGGTTTGCTTTACCATCTGGGTATTGGCAGCTGCTCTCTGCATCCCAGAAATCTTATACAG
C
CAAATCAAGGAGGAATCCGGCATTGCTATCTGCACCATGGTTTACCCTAGCGATGAGAGCACCAAACTG
AAG
TCAGCTGTCTTGACCCTGAAGGTCATTCTGGGGTTCTTCCTTCCCTTCGTGGTCATGGCTTGCTGCT
AT
ACCATCATCATTCACACCCTGATACAAGCCAAGAAGTCTTCCAAGCACAAAGCCCTAAAAGTGACCAT
C
ACTGTCCTGACCGTCTTTGTCTTGTCTCAGTTTCCCTACAACTGCATTTTGTTGGTGCAGACCATTGAC
GCC
TATGCCATGTTCATCTCCAACTGTGCCGTTTCCACCAACATTGACATCTGCTTCCAGGTCACCCAGA
CC
ATCGCCTTCTTCCACAGTTGCCTGAACCCTGTTCTCTATGTTTTTGTGGGTGAGAGATTCCGCCGGGA
T
CTCGTGAAAACCCTGAAGAACTTGGGTTGCATCAGCCAGGCCCAGTGGGTTTCATTTACAAGGAGAGAG
GGA
AGCTTGAAGCTGTCGTCTATGTTGCTGGAGACAACCTCAGGAGCACTCTCCCTCTGA


Translation (369 aa):
MTPTDFTSPIPNMADDYGSESTSSMEDYVNFNFTDFYCEKNNVRQFASHFLPPLYWLVFIVGALGNSLVI
L
VYWYCTRVKTMTDMFLLNLAIADLLFLVTLPFWAIAAADQWKFQTFMCKVVNSMYKMNFYSCVLLIMCI
S
VDRYIAIAQAMRAHTWREKRLLYSKMVCFTIWVLAAALCIPEILYSQIKEESGIAICTMVYPSDESTKL
K
SAVLTLKVILGFFLPFVVMACCYTIIIHTLIQAKKSSKHKALKVTITVLTVFVLSQFPYNCILLVQTID
A
YAMFISNCAVSTNIDICFQVTQTIAFFHSCLNPVLYVFVGERFRRDLVKTLKNLGCISQAQWVSFTRRE
G
SLKLSSMLLETTSGALSL




Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser