NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS34777.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34777.1 Public Homo sapiens 7 GIMAP8 24 110 108 CCDS HistoryNCBI Gene:155038Re-query CCDS DB by CCDS ID:34777.1Re-query CCDS DB by GeneID:155038See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34777.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000307271.4 ENSP00000305107.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000307271.4Link to Ensembl Protein Viewer:ENSP00000305107.3Re-query CCDS DB by Nucleotide ID:ENST00000307271Re-query CCDS DB by Protein ID:ENSP00000305107
Original member Current member NCBI NM_175571.4 NP_783161.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_175571.4Link to Protein Sequence:NP_783161.1Re-query CCDS DB by Nucleotide ID:NM_175571Re-query CCDS DB by Protein ID:NP_783161Link to BLAST:NP_783161.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_783161.1 665 Q8ND71 665 100% 0 0

Chromosomal Locations for CCDS 34777.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 150466699 150467334 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150470829 150470874 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150474012 150474638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 150477092 150477780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1998 nt):
ATGTCAGAGCAGAGCTGCCAGATGTCCGAACTGCGGCTCCTCCTCCTGGGAAAATGCCGCTCGGGAAAAA
GTGCCACAGGAAATGCCATTCTGGGCAAACATGTGTTCAAGTCCAAGTTCAGTGATCAGACAGTGATCAA
AATGTGCCAGAGAGAGAGTTGGGTCCTGAGAGAAAGGAAGGTTGTGGTAATTGACACCCCTGACCTTTTC
TCCTCAATAGCTTGTGCTGAAGACAAGCAACGCAACATCCAACACTGCTTGGAGCTCTCTGCTCCCAGCC
TCCATGCTCTGCTCTTGGTAATTGCCATCGGCCATTTCACAAGGGAGGATGAGGAAACAGCCAAGGGCAT
CCAACAAGTGTTTGGAGCTGAAGCCAGGAGGCACATCATTATTGTCTTCACTCGGAAGGATGATTTGGGG
GATGACTTGCTGCAAGATTTCATTGAAAAAAACAAACCTCTCAAGCAGTTGGTTCAAGACTATGAGGGCC
GATACTGCATTTTCAACAACAAGACCAATAGTAAGGATGAGCAGATCACCCAGGTGTTGGAGCTCCTTCG
CAAGGTTGAGTCTTTGGTGAATACGAACGGAGGACCCTATCATGTGAACTTCAAAACTGAAGGCAGCAGG
TTTCAAGATTGTGTGAATGAAGCTGCATCTCAAGAGGGAGACAAGCCACAGGGCCCAAGGGAAAGGCAGC
TGCAGTCCACAGGACCCGAGCAGAATCCGGGGACATCAGAACTGACAGTCCTCCTTGTGGGGAAACGCGG
TGCTGGAAAAAGTGCAGCAGGAAACAGCATTCTGGGGAGGCAGGCCTTTCAGACCGGATTTAGTGAGCAG
TCAGTAACCCAGAGCTTCTTGTCTGAGAGCAGAAGCTGGAGAAAAAAGAAAGTTTCGATCATTGATGCTC
CGGACATCTCATCTTTAAAGAACATTGACTCAGAAGTTAGAAAACACATCTGTACAGGCCCCCATGCCTT
CCTGCTGGTGACACCACTGGGCTTTTACACTAAGAATGATGAGGCAGTGCTGAGCACCATCCAAAACAAT
TTTGGAGAAAAATTCTTTGAGTACATGATCATACTTCTTACCAGGAAAGAAGATTTAGGGGATCAGGATC
TAGATACGTTCTTAAGAAACAGCAATAAAGCTCTCTATGGTCTCATCCAGAAGTGTAAAAACAGATATAG
TGCCTTCAACTACCGGGCAACAGGAGAAGAAGAGCAAAGGCAGGCGGACGAGCTCCTGGAAAAAATTGAG
AGCATGGTGCATCAGAATGGGAACAAGCATTGTGTTTTCAGAGAAAAAGAAACCCTGAACATTGTCCTTG
TGGGGAGAAGCGGGACTGGGAAGAGTGCGACCGGGAACTCTATCCTGGGGAGCCTCGTCTTCACCTCTCG
GCTCCGGGCCCAGCCAGTCACCAAGACCAGCCAGAGTGGCAGGAGGACATGGGACGGACAGGAGGTGGTG
GTTGTGGACACTCCTTCCTTCAACCAGATGCTGGATGTCGAAAAGGACCCATCCCGGTTAGAAGAGGAGG
TCAAGCGCTGTTTGTCCTGCTGTGAAAAAGGGGACACATTTTTTGTCCTGGTGTTCCAGCTGGGACGATT
CACTGAAGAGGACAAAACAGCTGTGGCGAAACTGGAGGCCATCTTTGGAGCAGACTTTACGAAATACGCG
ATTATGCTGTTCACCCGGAAGGAAGACCTAGGGGCGGGGAATTTGGAAGACTTCATGAAGAACTCAGATA
ACAAAGCCCTTCGGCGCATTTTTAAAAAGTGTGGGCGGCGAGTTTGTGCTTTTAACAACAAAGAAACAGG
CCAGGCCCAGGAAACCCAGGTGAAAGCTCTTTTAACAAAGGTCAATGATCTGAGAAAAGAAAGTGGGTGG
TCCGGGTATCCCCATACACAGGAGAACGTCAGCAAACTAATTAAAAATGTCCAGGAAATGTCCCAAGCCG
AAAAACTCCTTAAAAATTTAATAGGTATTTTACAATAG

Translation (665 aa):
MSEQSCQMSELRLLLLGKCRSGKSATGNAILGKHVFKSKFSDQTVIKMCQRESWVLRERKVVVIDTPDLF
SSIACAEDKQRNIQHCLELSAPSLHALLLVIAIGHFTREDEETAKGIQQVFGAEARRHIIIVFTRKDDLG
DDLLQDFIEKNKPLKQLVQDYEGRYCIFNNKTNSKDEQITQVLELLRKVESLVNTNGGPYHVNFKTEGSR
FQDCVNEAASQEGDKPQGPRERQLQSTGPEQNPGTSELTVLLVGKRGAGKSAAGNSILGRQAFQTGFSEQ
SVTQSFLSESRSWRKKKVSIIDAPDISSLKNIDSEVRKHICTGPHAFLLVTPLGFYTKNDEAVLSTIQNN
FGEKFFEYMIILLTRKEDLGDQDLDTFLRNSNKALYGLIQKCKNRYSAFNYRATGEEEQRQADELLEKIE
SMVHQNGNKHCVFREKETLNIVLVGRSGTGKSATGNSILGSLVFTSRLRAQPVTKTSQSGRRTWDGQEVV
VVDTPSFNQMLDVEKDPSRLEEEVKRCLSCCEKGDTFFVLVFQLGRFTEEDKTAVAKLEAIFGADFTKYA
IMLFTRKEDLGAGNLEDFMKNSDNKALRRIFKKCGRRVCAFNNKETGQAQETQVKALLTKVNDLRKESGW
SGYPHTQENVSKLIKNVQEMSQAEKLLKNLIGILQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH