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Report for CCDS6666.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6666.2 Public Homo sapiens 9 QNG1 24 110 108 CCDS HistoryNCBI Gene:84267Re-query CCDS DB by CCDS ID:6666.2Re-query CCDS DB by GeneID:84267See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 6666.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000376344.8 ENSP00000365522.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000376344.8Link to Ensembl Protein Viewer:ENSP00000365522.3Re-query CCDS DB by Nucleotide ID:ENST00000376344Re-query CCDS DB by Protein ID:ENSP00000365522
Original member Current member NCBI NM_032307.5 NP_115683.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032307.5Link to Protein Sequence:NP_115683.3Re-query CCDS DB by Nucleotide ID:NM_032307Re-query CCDS DB by Protein ID:NP_115683Link to BLAST:NP_115683.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115683.3 341 Q5T6V5 341 100% 0 0

Chromosomal Locations for CCDS 6666.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 83939511 83939743 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83944794 83944989 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83955381 83955640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 83956164 83956500 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1026 nt):
ATGGACGGGCTCCTAAATCCCAGGGAATCCTCTAAATTCATTGCAGAAAACAGTCGGGATGTGTTTATTG
ACAGCGGAGGCGTACGGAGGGTGGCAGAGCTGCTGCTGGCCAAGGCGGCGGGGCCAGAGCTGCGCGTGGA
GGGGTGGAAAGCCCTTCATGAGCTGAACCCCAGGGCGGCCGACGAGGCCGCGGTCAACTGGGTGTTCGTG
ACAGACACGCTCAACTTCTCCTTTTGGTCGGAGCAGGACGAGCACAAGTGTGTGGTGAGGTACAGAGGGA
AAACATACAGTGGGTACTGGTCCCTGTGCGCCGCCGTCAACAGAGCCCTCGACGAAGGGATACCAATAAC
TAGTGCCTCGTACTACGCGACAGTGACCCTGGATCAGGTTCGGAATATACTTCGTTCTGACACAGACGTT
TCCATGCCTTTAGTAGAAGAGAGGCATCGGATTCTCAATGAAACCGGGAAAATTCTGCTGGAGAAGTTTG
GAGGCTCTTTTCTCAACTGCGTCCGAGAAAGTGAGAATAGTGCGCAGAAGTTAATGCACCTGGTGGTTGA
AAGTTTTCCTTCTTACAGAGATGTGACTCTGTTTGAGGGGAAAAGAGTTTCTTTTTACAAACGAGCCCAA
ATCCTTGTAGCAGATACGTGGAGTGTATTGGAAGGAAAAGGAGATGGCTGCTTCAAGGACATCTCCAGTA
TCACCATGTTTGCTGATTATAGATTACCTCAGGTTCTTGCTCATCTTGGAGCCCTGAAATACTCTGATGA
CCTACTGAAGAAGCTTCTCAAAGGAGAAATGCTCTCATATGGAGACAGGCAAGAGGTGGAAATCAGAGGG
TGCTCGCTTTGGTGTGTTGAGCTGATCCGGGATTGTCTTCTGGAGCTTATTGAACAAAAGGGTGAAAAAC
CTAATGGAGAGATCAATTCCATTCTTCTGGATTATTACTTATGGGACTATGCCCATGACCATAGGGAAGA
TATGAAAGGAATTCCGTTTCATCGCATACGTTGCATATATTATTGA

Translation (341 aa):
MDGLLNPRESSKFIAENSRDVFIDSGGVRRVAELLLAKAAGPELRVEGWKALHELNPRAADEAAVNWVFV
TDTLNFSFWSEQDEHKCVVRYRGKTYSGYWSLCAAVNRALDEGIPITSASYYATVTLDQVRNILRSDTDV
SMPLVEERHRILNETGKILLEKFGGSFLNCVRESENSAQKLMHLVVESFPSYRDVTLFEGKRVSFYKRAQ
ILVADTWSVLEGKGDGCFKDISSITMFADYRLPQVLAHLGALKYSDDLLKKLLKGEMLSYGDRQEVEIRG
CSLWCVELIRDCLLELIEQKGEKPNGEINSILLDYYLWDYAHDHREDMKGIPFHRIRCIYY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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