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Report for CCDS55113.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
55113.1 Public Homo sapiens 7 ZNF727 24 110 108 CCDS HistoryNCBI Gene:442319Re-query CCDS DB by CCDS ID:55113.1Re-query CCDS DB by GeneID:442319See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 8, NCBI annotation release 37.2, Ensembl annotation release 62

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 55113.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000456806.3 ENSP00000485448.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000456806.3Link to Ensembl Protein Viewer:ENSP00000485448.1Re-query CCDS DB by Nucleotide ID:ENST00000456806Re-query CCDS DB by Protein ID:ENSP00000485448
Original member Current member NCBI NM_001159522.3 NP_001152994.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001159522.3Link to Protein Sequence:NP_001152994.1Re-query CCDS DB by Nucleotide ID:NM_001159522Re-query CCDS DB by Protein ID:NP_001152994Link to BLAST:NP_001152994.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001152994.1 499 A8MUV8 499 100% 0 0

Chromosomal Locations for CCDS 55113.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 64045622 64045624 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64068891 64069017 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64069514 64069609 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 64077276 64078549 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1500 nt):
ATGCGAGTGCTAACATTCAGGGATGTGGCTGTAGAATTCTCCCCAGAAGAGTGGGAATGCCTGGACTCTG
CTCAGCAGCGTTTGTATAGGGATGTGATGTTAGAGAACTACGGAAACCTGTTCTCCTTGGGTCTTGCTAT
CTTTAAGCCAGACTTGATTACCTATCTGGAGCAAAGAAAAGAGCCTTGGAATGCGAGGAGACAGAAGACA
GTAGCCAAACACCCAGCTGGCTCTTTGCATTTTACTGCAGAGATATTGCTGGAGCACGACATAAACGATT
CATTTCAAAAAGTGATCCTGAGAAAATCTGGAAGCTGTGACCTTAATACTTTACGTTTAAAGAAAGACTA
CCAACGTGTGGGTAATTGCAAGGGGCAGAAAAGCAGTTATAATGGCATTCATCAATGTTTGTCAGCTACC
CGTAGCAAAACCTGTCAATATAATAAATGTGGCAAAGCTTTTGGGTTGTGCTCAATCTTCACTGAACATA
AGAAAATTTTTAGCAGAGAGAAATGCTACAAATGTGAAGAATGTGGCAAAGACTGTAGGTTGTCAGATTT
TACCATACAGAAGAGAATTCATACTGCAGATAGAAGTTACAAATGTGAAGAATGTGGCAAAGCCTGTAAA
AAGTTCTCAAACCTTACTGAACATAATAGAGTTCATACTGGAAAGAAACCCTACAAATGTGAAGAATGTG
GCAAAACATTTACCTGTTCCTCAGCCCTTACTAAACACAAGAGAAATCATACTGGAGACAGACCCTACAA
ATGCGAAGAATGTCACAAAGCCTTTAGGTGTTGCTCAGACCTTACTAAACATAAGAGAATTCATACTGGA
GAGAAACCCTACAAATGTAAAGAATGTCACAAAGCCTTTAGGTGTTGCTCAGACCTTACTAAACATAAGA
GAATTCATACTGGAGAGAAACCCTACAAATGTAATGAATGTGGAAAAGCTTTTATGTGGATCTCGGCCCT
TAGTCAACATAACAGAATTCATACTGGAGAGAAACCCTACATTTGTGAAGAATGTGGCAAAGCCTTTACC
TACTCCTCAACCCTTATTAGCCACAAGAGAATTCATATGGAATTGAGACCTTACAAATGTGAAGAATGTG
GCAAAACCTTTAAGTGGTTCTCAGACCTGACTAATCATAAGAGAATTCACACTGGAGAGAAACCCTACAA
ATGTGAAGAATGTGGCAAAAGCTTTACCTGCTCCTCAAACCTTATTAAACACAAGAGAATTCATATGGAA
GTGAGACCTTACAAATGTGAAGAATGTGGCAAAACCTTTAAGTGGTTCCCAGACCTGACTAATCATAAGA
GAATTCACACTGGAGAGAAGCCCTACAAATGTGAAGAATGTGGCAAAACCTTTACCTGCTCCTCAAGCCT
TATTAAACACAAGAGAAGTCATACTGGAGACAGACCTACAAGTGCAAAGAATGTGGCAAAGCCTTTAGGT
GGTTCTCAGACCTTACTAAACATAAGGTAA

Translation (499 aa):
MRVLTFRDVAVEFSPEEWECLDSAQQRLYRDVMLENYGNLFSLGLAIFKPDLITYLEQRKEPWNARRQKT
VAKHPAGSLHFTAEILLEHDINDSFQKVILRKSGSCDLNTLRLKKDYQRVGNCKGQKSSYNGIHQCLSAT
RSKTCQYNKCGKAFGLCSIFTEHKKIFSREKCYKCEECGKDCRLSDFTIQKRIHTADRSYKCEECGKACK
KFSNLTEHNRVHTGKKPYKCEECGKTFTCSSALTKHKRNHTGDRPYKCEECHKAFRCCSDLTKHKRIHTG
EKPYKCKECHKAFRCCSDLTKHKRIHTGEKPYKCNECGKAFMWISALSQHNRIHTGEKPYICEECGKAFT
YSSTLISHKRIHMELRPYKCEECGKTFKWFSDLTNHKRIHTGEKPYKCEECGKSFTCSSNLIKHKRIHME
VRPYKCEECGKTFKWFPDLTNHKRIHTGEKPYKCEECGKTFTCSSSLIKHKRSHTGDRPTSAKNVAKPLG
GSQTLLNIR


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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