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Report for CCDS3319.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
3319.1 Public Homo sapiens 3 NRROS 24 110 108 CCDS HistoryNCBI Gene:375387Re-query CCDS DB by CCDS ID:3319.1Re-query CCDS DB by GeneID:375387See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 3319.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000328557.5 ENSP00000328625.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000328557.5Link to Ensembl Protein Viewer:ENSP00000328625.4Re-query CCDS DB by Nucleotide ID:ENST00000328557Re-query CCDS DB by Protein ID:ENSP00000328625
Original member Current member NCBI NM_198565.3 NP_940967.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_198565.3Link to Protein Sequence:NP_940967.1Re-query CCDS DB by Nucleotide ID:NM_198565Re-query CCDS DB by Protein ID:NP_940967Link to BLAST:NP_940967.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_940967.1 692 Q86YC3 692 100% 0 0

Chromosomal Locations for CCDS 3319.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 3 (NC_000003.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 196654540 196654647 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 196659752 196661722 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2079 nt):
ATGGAGTTGCTGCCTCTTTGGCTCTGCCTGGGTTTTCACTTCCTGACCGTGGGCTGGAGGAACAGAAGCG
GAACAGCCACAGCAGCCTCCCAAGGAGTCTGCAAGTTGGTGGGTGGAGCCGCTGACTGCCGAGGGCAGAG
CCTCGCTTCGGTGCCCAGCAGCCTCCCGCCCCACGCCCGGATGCTCACCCTGGATGCCAACCCTCTCAAG
ACCCTGTGGAATCACTCCCTCCAGCCTTACCCTCTCCTGGAGAGCCTCAGCCTGCACAGCTGCCACCTGG
AGCGCATCAGCCGCGGCGCCTTCCAGGAGCAAGGTCACCTGCGCAGCCTGGTCCTGGGGGACAACTGCCT
CTCAGAGAACTACGAAGAGACGGCAGCCGCCCTCCACGCCCTGCCGGGCCTGCGGAGGCTGGACTTGTCA
GGAAACGCCCTGACGGAGGACATGGCAGCCCTCATGCTCCAGAACCTCTCCTCGCTGCGGTCCGTGTCCC
TGGCGGGGAACACCATCATGCGGCTGGACGACTCCGTCTTCGAGGGCCTGGAGCGTCTCCGGGAGCTGGA
TCTGCAGAGGAACTACATCTTCGAGATCGAGGGCGGCGCTTTCGACGGCCTGGCTGAGCTGAGGCACCTC
AACCTGGCCTTCAACAACCTCCCCTGCATCGTGGACTTCGGGCTCACGCGGCTGCGGGTCCTCAACGTCA
GCTACAACGTCCTGGAGTGGTTCCTCGCGACCGGGGGAGAGGCTGCCTTCGAGCTGGAGACGCTGGACCT
GTCTCACAACCAGCTGCTGTTCTTCCCGCTGCTGCCCCAGTACAGCAAGTTGCGGACCCTCCTGCTGCGC
GACAACAACATGGGCTTCTACCGGGACCTGTACAACACCTCGTCGCCGAGGGAGATGGTGGCCCAGTTCC
TCCTCGTGGACGGCAACGTGACCAACATCACCACCGTCAGCCTCTGGGAAGAATTCTCCTCCAGCGACCT
CGCAGATCTCCGCTTCCTGGACATGAGCCAGAACCAGTTCCAGTACCTGCCAGACGGCTTCCTGAGGAAA
ATGCCTTCCCTCTCCCACCTGAACCTCCACCAGAATTGCCTGATGACGCTTCACATTCGGGAGCACGAGC
CCCCCGGAGCGCTCACCGAGCTGGACCTGAGCCACAACCAGCTGTCGGAGCTGCACCTGGCTCCGGGGCT
GGCCAGCTGCCTGGGCAGCCTGCGCTTGTTCAACCTGAGCTCCAACCAGCTCCTGGGCGTCCCCCCTGGC
CTCTTCGCCAATGCTAGGAACATCACTACACTTGACATGAGCCACAATCAGATCTCACTTTGTCCCCTGC
CAGCTGCCTCGGACCGGGTGGGCCCCCCTAGCTGTGTGGATTTCAGGAATATGGCATCTTTAAGGAGCCT
GTCTCTGGAGGGCTGTGGCCTGGGGGCATTGCCAGACTGCCCATTCCAAGGGACCTCCCTGACCTACTTA
GACCTCTCAAGCAACTGGGGGGTTCTGAATGGGAGCCTCGCCCCACTCCAGGATGTTGCCCCCATGTTAC
AGGTCCTGTCTCTCAGGAACATGGGCCTCCACTCCAGCTTTATGGCGTTGGACTTCTCTGGGTTTGGGAA
TCTCAGGGACTTAGATCTGTCGGGGAATTGCTTGACCACCTTCCCAAGGTTTGGGGGCAGCCTGGCCCTG
GAGACCCTGGATCTCCGTAGAAACTCGCTCACAGCCCTTCCCCAGAAGGCTGTGTCTGAGCAGCTCTCGA
GAGGTCTGCGGACCATCTACCTCAGTCAGAATCCATATGACTGCTGTGGGGTGGATGGCTGGGGGGCCCT
GCAGCATGGGCAGACGGTGGCCGACTGGGCCATGGTCACCTGCAACCTCTCCTCCAAGATCATCCGCGTG
ACGGAGCTGCCCGGAGGTGTGCCTCGGGACTGCAAGTGGGAGCGGCTGGACCTGGGCCTGCTCTACCTCG
TGCTCATCCTCCCCAGCTGCCTCACCCTGCTGGTGGCCTGCACTGTCATCGTCCTCACTTTTAAGAAGCC
TCTGCTTCAGGTCATCAAGAGCCGCTGCCACTGGTCCTCCGTTTACTGA

Translation (692 aa):
MELLPLWLCLGFHFLTVGWRNRSGTATAASQGVCKLVGGAADCRGQSLASVPSSLPPHARMLTLDANPLK
TLWNHSLQPYPLLESLSLHSCHLERISRGAFQEQGHLRSLVLGDNCLSENYEETAAALHALPGLRRLDLS
GNALTEDMAALMLQNLSSLRSVSLAGNTIMRLDDSVFEGLERLRELDLQRNYIFEIEGGAFDGLAELRHL
NLAFNNLPCIVDFGLTRLRVLNVSYNVLEWFLATGGEAAFELETLDLSHNQLLFFPLLPQYSKLRTLLLR
DNNMGFYRDLYNTSSPREMVAQFLLVDGNVTNITTVSLWEEFSSSDLADLRFLDMSQNQFQYLPDGFLRK
MPSLSHLNLHQNCLMTLHIREHEPPGALTELDLSHNQLSELHLAPGLASCLGSLRLFNLSSNQLLGVPPG
LFANARNITTLDMSHNQISLCPLPAASDRVGPPSCVDFRNMASLRSLSLEGCGLGALPDCPFQGTSLTYL
DLSSNWGVLNGSLAPLQDVAPMLQVLSLRNMGLHSSFMALDFSGFGNLRDLDLSGNCLTTFPRFGGSLAL
ETLDLRRNSLTALPQKAVSEQLSRGLRTIYLSQNPYDCCGVDGWGALQHGQTVADWAMVTCNLSSKIIRV
TELPGGVPRDCKWERLDLGLLYLVLILPSCLTLLVACTVIVLTFKKPLLQVIKSRCHWSSVY


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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