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Report for CCDS7002.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
7002.1 Public Homo sapiens 9 EGFL7 24 110 108 CCDS HistoryNCBI Gene:51162Re-query CCDS DB by CCDS ID:7002.1Re-query CCDS DB by GeneID:51162See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 7002.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308874.12 ENSP00000307843.7 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308874.12Link to Ensembl Protein Viewer:ENSP00000307843.7Re-query CCDS DB by Nucleotide ID:ENST00000308874Re-query CCDS DB by Protein ID:ENSP00000307843
Original member Current member EBI ENST00000371698.3 ENSP00000360763.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371698.3Link to Ensembl Protein Viewer:ENSP00000360763.3Re-query CCDS DB by Nucleotide ID:ENST00000371698Re-query CCDS DB by Protein ID:ENSP00000360763
Original member Current member EBI ENST00000371699.5 ENSP00000360764.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000371699.5Link to Ensembl Protein Viewer:ENSP00000360764.1Re-query CCDS DB by Nucleotide ID:ENST00000371699Re-query CCDS DB by Protein ID:ENSP00000360764
Original member Current member EBI ENST00000406555.7 ENSP00000385639.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000406555.7Link to Ensembl Protein Viewer:ENSP00000385639.3Re-query CCDS DB by Nucleotide ID:ENST00000406555Re-query CCDS DB by Protein ID:ENSP00000385639
Original member Current member NCBI NM_016215.5 NP_057299.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_016215.5Link to Protein Sequence:NP_057299.1Re-query CCDS DB by Nucleotide ID:NM_016215Re-query CCDS DB by Protein ID:NP_057299Link to BLAST:NP_057299.1
Original member Current member NCBI NM_201446.3 NP_958854.1 Accepted alive Link to Nucleotide Sequence:NM_201446.3Link to Protein Sequence:NP_958854.1Re-query CCDS DB by Nucleotide ID:NM_201446Re-query CCDS DB by Protein ID:NP_958854Link to BLAST:NP_958854.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_057299.1 273 Q9UHF1 273 100% 0 0
NP_958854.1 273 Q9UHF1 273 100% 0 0

Chromosomal Locations for CCDS 7002.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 136668283 136668362 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136668557 136668673 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136669606 136669721 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136669914 136670009 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136670169 136670330 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136670950 136671014 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136671926 136672088 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 136672264 136672286 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (822 nt):
ATGAGGGGCTCTCAGGAGGTGCTGCTGATGTGGCTTCTGGTGTTGGCAGTGGGCGGCACAGAGCACGCCT
ACCGGCCCGGCCGTAGGGTGTGTGCTGTCCGGGCTCACGGGGACCCTGTCTCCGAGTCGTTCGTGCAGCG
TGTGTACCAGCCCTTCCTCACCACCTGCGACGGGCACCGGGCCTGCAGCACCTACCGAACCATCTATAGG
ACCGCCTACCGCCGCAGCCCTGGGCTGGCCCCTGCCAGGCCTCGCTACGCGTGCTGCCCCGGCTGGAAGA
GGACCAGCGGGCTTCCTGGGGCCTGTGGAGCAGCAATATGCCAGCCGCCATGCCGGAACGGAGGGAGCTG
TGTCCAGCCTGGCCGCTGCCGCTGCCCTGCAGGATGGCGGGGTGACACTTGCCAGTCAGATGTGGATGAA
TGCAGTGCTAGGAGGGGCGGCTGTCCCCAGCGCTGCGTCAACACCGCCGGCAGTTACTGGTGCCAGTGTT
GGGAGGGGCACAGCCTGTCTGCAGACGGTACACTCTGTGTGCCCAAGGGAGGGCCCCCCAGGGTGGCCCC
CAACCCGACAGGAGTGGACAGTGCAATGAAGGAAGAAGTGCAGAGGCTGCAGTCCAGGGTGGACCTGCTG
GAGGAGAAGCTGCAGCTGGTGCTGGCCCCACTGCACAGCCTGGCCTCGCAGGCACTGGAGCATGGGCTCC
CGGACCCCGGCAGCCTCCTGGTGCACTCCTTCCAGCAGCTCGGCCGCATCGACTCCCTGAGCGAGCAGAT
TTCCTTCCTGGAGGAGCAGCTGGGGTCCTGCTCCTGCAAGAAAGACTCGTGA

Translation (273 aa):
MRGSQEVLLMWLLVLAVGGTEHAYRPGRRVCAVRAHGDPVSESFVQRVYQPFLTTCDGHRACSTYRTIYR
TAYRRSPGLAPARPRYACCPGWKRTSGLPGACGAAICQPPCRNGGSCVQPGRCRCPAGWRGDTCQSDVDE
CSARRGGCPQRCVNTAGSYWCQCWEGHSLSADGTLCVPKGGPPRVAPNPTGVDSAMKEEVQRLQSRVDLL
EEKLQLVLAPLHSLASQALEHGLPDPGSLLVHSFQQLGRIDSLSEQISFLEEQLGSCSCKKDS


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
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  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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