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Report for CCDS12471.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12471.1 Public Homo sapiens 19 ZBTB32 24 110 108 CCDS HistoryNCBI Gene:27033Re-query CCDS DB by CCDS ID:12471.1Re-query CCDS DB by GeneID:27033See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12471.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000262630.7 ENSP00000262630.3 Accepted alive Link to Ensembl Transcript Viewer:ENST00000262630.7Link to Ensembl Protein Viewer:ENSP00000262630.3Re-query CCDS DB by Nucleotide ID:ENST00000262630Re-query CCDS DB by Protein ID:ENSP00000262630
Original member Current member EBI ENST00000392197.7 ENSP00000376035.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000392197.7Link to Ensembl Protein Viewer:ENSP00000376035.1Re-query CCDS DB by Nucleotide ID:ENST00000392197Re-query CCDS DB by Protein ID:ENSP00000376035
Original member Current member NCBI NM_014383.3 NP_055198.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_014383.3Link to Protein Sequence:NP_055198.1Re-query CCDS DB by Nucleotide ID:NM_014383Re-query CCDS DB by Protein ID:NP_055198Link to BLAST:NP_055198.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055198.1 487 Q9Y2Y4 487 100% 0 0

Chromosomal Locations for CCDS 12471.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 35714627 35715507 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35715757 35715830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35715939 35716007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35716133 35716297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 35716478 35716752 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1464 nt):
ATGTCCCTGCCCCCCATAAGACTGCCCAGCCCCTATGGCTCTGATCGGCTGGTACAGCTAGCAGCCAGGC
TCCGGCCAGCACTCTGTGATACTCTGATCACCGTAGGGAGCCAGGAGTTCCCCGCCCACAGCCTGGTGCT
AGCAGGTGTCAGCCAGCAGCTGGGCCGCAGGGGCCAGTGGGCTCTGGGAGAAGGCATCAGCCCTTCTACC
TTTGCCCAGCTCCTGAACTTTGTGTATGGGGAGAGTGTAGAGCTGCAGCCTGGAGAGCTAAGGCCCCTTC
AGGAGGCGGCCAGGGCCTTGGGAGTGCAGTCCCTGGAAGAGGCATGCTGGAGGGCTCGAGGGGACAGGGC
TAAAAAGCCAGATCCAGGCCTGAAGAAACATCAGGAGGAGCCAGAGAAACCCTCAAGGAATCCTGAGAGA
GAACTGGGGGACCCTGGAGAGAAGCAGAAACCAGAACAGGTTTCTAGAACTGGTGGGAGAGAACAGGAGA
TGTTGCACAAGCACTCGCCACCAAGAGGCAGACCCGAGATGGCAGGAGCAACGCAGGAGGCTCAGCAGGA
ACAGACCAGGTCAAAGGAGAAACGCCTCCAAGCCCCTGTTGGCCAAAGGGGAGCAGATGGGAAGCATGGA
GTGCTCACGTGGTTGAGGGAAAATCCAGGGGGCTCTGAGGAAAGTCTGCGCAAGCTCCCTGGCCCCCTTC
CCCCAGCAGGCTCCCTGCAAACCAGCGTCACCCCTAGGCCCTCGTGGGCTGAGGCCCCTTGGTTGGTGGG
GGGCCAGCCTGCCCTGTGGAGCATCCTGCTGATGCCGCCCAGATATGGCATTCCCTTCTACCATAGCACC
CCCACCACTGGAGCCTGGCAGGAGGTCTGGCGGGAACAGAGGATCCCACTGTCCCTAAATGCCCCCAAAG
GGCTCTGGAGCCAGAACCAGTTGGCCTCCTCCAGCCCTACCCCAGGTTCCCTCCCCCAGGGCCCCGCACA
GCTCAGCCCTGGGGAGATGGAAGAGTCTGATCAGGGGCACACAGGCGCACTTGCAACCTGTGCGGGTCAT
GAGGACAAGGCAGGCTGCCCACCTCGCCCGCACCCTCCCCCGGCCCCTCCTGCTCGGTCTCGGCCCTATG
CGTGCTCTGTCTGTGGAAAGAGGTTTTCACTCAAGCATCAGATGGAGACGCACTACCGAGTCCACACAGG
AGAGAAGCCCTTCTCCTGTAGCCTTTGTCCTCAGCGCTCCCGGGACTTCTCGGCCATGACCAAGCACCTG
CGGACACACGGGGCCGCTCCGTACCGCTGCTCCCTGTGCGGGGCCGGCTGTCCCAGCCTGGCCTCCATGC
AGGCGCACATGCGCGGTCACTCGCCCAGCCAACTCCCGCCCGGATGGACCATCCGCTCCACCTTCCTCTA
CTCCTCCTCGAGGCCGTCTCGGCCCTCGACCTCTCCCTGTTGTCCTTCTTCCTCCACCACCTGA

Translation (487 aa):
MSLPPIRLPSPYGSDRLVQLAARLRPALCDTLITVGSQEFPAHSLVLAGVSQQLGRRGQWALGEGISPST
FAQLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRARGDRAKKPDPGLKKHQEEPEKPSRNPER
ELGDPGEKQKPEQVSRTGGREQEMLHKHSPPRGRPEMAGATQEAQQEQTRSKEKRLQAPVGQRGADGKHG
VLTWLRENPGGSEESLRKLPGPLPPAGSLQTSVTPRPSWAEAPWLVGGQPALWSILLMPPRYGIPFYHST
PTTGAWQEVWREQRIPLSLNAPKGLWSQNQLASSSPTPGSLPQGPAQLSPGEMEESDQGHTGALATCAGH
EDKAGCPPRPHPPPAPPARSRPYACSVCGKRFSLKHQMETHYRVHTGEKPFSCSLCPQRSRDFSAMTKHL
RTHGAAPYRCSLCGAGCPSLASMQAHMRGHSPSQLPPGWTIRSTFLYSSSRPSRPSTSPCCPSSSTT


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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