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Report for CCDS32841.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32841.1 Public Homo sapiens 18 DOK6 24 110 108 CCDS HistoryNCBI Gene:220164Re-query CCDS DB by CCDS ID:32841.1Re-query CCDS DB by GeneID:220164See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32841.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000382713.10 ENSP00000372160.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000382713.10Link to Ensembl Protein Viewer:ENSP00000372160.5Re-query CCDS DB by Nucleotide ID:ENST00000382713Re-query CCDS DB by Protein ID:ENSP00000372160
Original member Current member NCBI NM_152721.6 NP_689934.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_152721.6Link to Protein Sequence:NP_689934.2Re-query CCDS DB by Nucleotide ID:NM_152721Re-query CCDS DB by Protein ID:NP_689934Link to BLAST:NP_689934.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_689934.2 331 Q6PKX4 331 100% 0 0

Chromosomal Locations for CCDS 32841.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 69401245 69401310 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69564487 69564594 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69599384 69599498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69677734 69677853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69698404 69698593 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69738965 69739103 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69757756 69757873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 69841244 69841383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (996 nt):
ATGGCCTCCAACTTTAACGACATAGTCAAGCAGGGCTACGTGAAAATCCGCAGCAGGAAGCTTGGGATTT
TCAGACGATGCTGGTTGGTTTTCAAGAAGGCTTCTAGCAAAGGACCCAGAAGGTTAGAAAAATTTCCAGA
TGAAAAGGCAGCTTATTTCAGAAACTTTCATAAGGTAACTGAACTGCACAATATCAAAAATATAACCAGA
CTGCCCCGAGAGACAAAGAAGCATGCGGTGGCAATCATCTTTCACGATGAAACATCGAAGACATTTGCCT
GTGAGTCAGAGCTGGAGGCCGAGGAGTGGTGCAAGCACCTCTGCATGGAGTGTCTGGGGACCAGGCTCAA
TGATATCAGCCTTGGGGAGCCCGACCTTCTGGCCGCAGGAGTGCAGCGGGAACAGAATGAGAGATTCAAC
GTGTATCTTATGCCTACACCAAACCTGGATATTTATGGTGAATGCACAATGCAGATCACTCATGAAAATA
TCTATCTCTGGGATATCCACAATGCCAAGGTCAAACTGGTGATGTGGCCTCTCAGCTCACTGAGGAGATA
CGGTCGGGACTCAACGTGGTTCACGTTTGAGTCAGGAAGAATGTGTGACACAGGAGAAGGACTATTCACT
TTTCAAACAAGGGAAGGAGAAATGATCTATCAGAAGGTTCATTCTGCGACACTGGCCATAGCTGAGCAAC
ATGAAAGATTAATGCTAGAAATGGAACAGAAGGCCCGGCTTCAGACAAGCTTGACTGAACCAATGACATT
ATCCAAATCAATATCTCTTCCTCGCAGCGCGTACTGGCATCACATCACTCGTCAGAACAGCGTTGGTGAA
ATCTACAGTTTGCAAGGTCATGGGTTTGGTTCGTCAAAGATGTCTCGTGCACAGACATTTCCCAGCTACG
CCCCAGAACAGAGTGAAGAGGCCCAGCAGCCGTTGTCGCGGTCCAGCAGCTATGGATTCAGCTACAGCTC
CAGCCTCATCCAATGA

Translation (331 aa):
MASNFNDIVKQGYVKIRSRKLGIFRRCWLVFKKASSKGPRRLEKFPDEKAAYFRNFHKVTELHNIKNITR
LPRETKKHAVAIIFHDETSKTFACESELEAEEWCKHLCMECLGTRLNDISLGEPDLLAAGVQREQNERFN
VYLMPTPNLDIYGECTMQITHENIYLWDIHNAKVKLVMWPLSSLRRYGRDSTWFTFESGRMCDTGEGLFT
FQTREGEMIYQKVHSATLAIAEQHERLMLEMEQKARLQTSLTEPMTLSKSISLPRSAYWHHITRQNSVGE
IYSLQGHGFGSSKMSRAQTFPSYAPEQSEEAQQPLSRSSSYGFSYSSSLIQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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