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Report for CCDS30114.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30114.1 Public Mus musculus X Rbmx2 23 108 98 CCDS HistoryNCBI Gene:209003Re-query CCDS DB by CCDS ID:30114.1Re-query CCDS DB by GeneID:209003See the combined annotation on chromosome X in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 30114.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033433.2 ENSMUSP00000033433.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033433.2Link to Ensembl Protein Viewer:ENSMUSP00000033433.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000033433Re-query CCDS DB by Protein ID:ENSMUSP00000033433
Original member Current member NCBI NM_173376.3 NP_775552.1 Accepted alive Link to Nucleotide Sequence:NM_173376.3Link to Protein Sequence:NP_775552.1Re-query CCDS DB by Nucleotide ID:NM_173376Re-query CCDS DB by Protein ID:NP_775552Link to BLAST:NP_775552.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_775552.1 326 Q8R0F5 326 100% 0 0

Chromosomal Locations for CCDS 30114.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome X (NC_000086.7)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome XSee the combined annotation on chromosome X in Sequence Viewer

Chromosome Start Stop Links
X 48695116 48695120 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48695320 48695435 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48697401 48697452 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48706305 48706434 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48708890 48709073 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X
X 48709576 48710069 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome XLink to Ensembl Genome Browser on chromosome X

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (981 nt):
ATGAACCCTCTGACTAAGGTGAAGCTGATCAATGAACTGAATGAGCGAGAGGTTCAACTTGGAGTGGCGG
AAAAGGTGTCTTGGCACTCGGAATACAAGCACAGCGCCTGGATCTTTGTTGGAGGGCTTCCTTATGAATT
GACAGAAGGCGACATCATCTGTGTGTTCTCACAATATGGGGAGATTGTCAACATTAATCTTGTGAGAGAC
AAGAAGACTGGGAAATCCAAAGGATTCTGTTTCCTGTGCTATGAAGACCAGAGGAGCACAGTTCTGGCTG
TTGACAATTTCAATGGAATTAAGATTAAAGGAAGAACTATCCGTGTGGACCATGTGTCAAACTACCGGGC
TCCTCAGGAATCAGAAGATGTGGATGATGTGACTAGAGAGCTCCAAGAGAAGGGCTGTGGGGTTAAAACA
CCCCCATCAAGTCCTCCTGAAGTCTCTGAAGATGAAGATGCCAAGCTCACAAAAAAGCACAAAAAAGACA
AAAAAGAGAAAAAGAAAAGGAAGAAAGAGAAGACGGAAGGGCAGGCCCAGGCAGAGCAGCCGTCCTGCTC
CAGAAGCGCGACAGTGAAGGAGAAGAAGGATGAGCGCGCTTCCAGGAAGCACAGTAGCAAGACTTCCGAG
AGAGCACAGAAGTCAGAACACAGAGAGAGCAAGAAGAGTCACTCGGGCTCCCCTGATGGCAGGAGTTCCT
ACCATGCTAGGGCAGAGGACCCTGAGTGCAAGGCAAGGAAAGAGAAACCCAAGCATGAGCACAAGTCCGC
CAGCAGGAGGGAGGCCGAGGAGAAGAGCAGAGAGAGGGAGAGAGGGAGGAGCTCGGGGACTCATTCCGGC
AGGCACAGGGGGCATTCTGATGGGCGGAGCCATAGAAGTAGAAGTAGGAGTAGGAGTCCAGATAAGTCCC
ATAGGCACAAAAAGTACAGGCACTCTCGGGAGCGGGACTCCTACCATGGCAGTGACCGGAGACATCACTG
A

Translation (326 aa):
MNPLTKVKLINELNEREVQLGVAEKVSWHSEYKHSAWIFVGGLPYELTEGDIICVFSQYGEIVNINLVRD
KKTGKSKGFCFLCYEDQRSTVLAVDNFNGIKIKGRTIRVDHVSNYRAPQESEDVDDVTRELQEKGCGVKT
PPSSPPEVSEDEDAKLTKKHKKDKKEKKKRKKEKTEGQAQAEQPSCSRSATVKEKKDERASRKHSSKTSE
RAQKSEHRESKKSHSGSPDGRSSYHARAEDPECKARKEKPKHEHKSASRREAEEKSRERERGRSSGTHSG
RHRGHSDGRSHRSRSRSRSPDKSHRHKKYRHSRERDSYHGSDRRHH


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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